| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI00830 |
|---|
| Symbol | |
|---|
| ID | 3259455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | + |
|---|
| Start bp | 205746 |
|---|
| End bp | 207378 |
|---|
| Gene Length | 1633 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638258568 |
|---|
| Product | monocarboxylic acid transporter, putative |
|---|
| Protein accession | XP_572815 |
|---|
| Protein GI | 58271318 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TATAAACACT AAGTCTCCCT TGTAATCTGT CGAATCTCCA TTGCACTAGA CCATTATACA
CTCGGCGAAC CATAAACGAT GTCCGAGGAG GTGATAGAAT TACGGAATCT CAATACTCTT
ACAGAACGCA CTACTACGGT ACAACGCTTC GAAGAAAATC GAGAGGACAA TGAATCAGTG
GGCTCACGCA AGGCGGACGA TACACCTTCG GAGCGCTCTT TAGCACAGGA GGACGAAGAG
AATCAAGGAC ATGAAGAAGC TGTAATCCAG TATGCGCTGC CTCCGGCCGA TTGTGGGATT
AGAGCATGGC TCTTTTTGGC CGGCGCCACC ATGATGGAGC TTTTAATTTG GGCAATACCA
ACTTCTGTTG GTGTACTGCA TGTATACTGG ACCAATGAGC TCTTCGAGGG GAGGGGAACG
GCCACCTTAA CCCTTGCGGC TACACTTCAC AGTGGTTTAG TGTACATGAG CACTGCATTA
CTCGGGCCGT AAGCATATGA TGTCGTAAAC CCACCGCTAG AGACTCGCTG ACAAGACGCC
TAGGCTCGTT GTAAGAGCAA CCACTTGGCA AAAGACAATC CAAGTTGTAA CGTGGATCAT
CTCTGCCGCT GGGCTCATTG CCAGTGCCTT TGCTACCCAG GTGAGCTTGT TGCCGAATAT
CACTTTACGC CTGCGCATTG CATTGATTCC AACACAGCCA TGGCACCTGA TTGTCACGTT
CGGTATCATC TATCCAGTGT GTGGTGGTAG GTTTCGCTGC CAGTTTGCAT CTGAGACTCT
AGCTGATCAC AGTTAGCTGC ATACCTGCCG TGCGCTACTC TTTTATTTGA ATGGTTTGTT
AAGGCAAGAG GGACTGCGAT GGGTATCGTC TACGCAGGAA TGGGCGTGGG CGGTGCTGTC
TGTCCCTTTA TCATAGACGG CCTTTTAAAA CGCTATAGCT ACAAAACCAC AATGATCTCT
ATTGGAGTTG GCTTTGGTAT CATTGGCCTT ATCTCGCTAA TCCCCATCCG TCATCGAATT
CCCCCAACCA GTCGGTCTCA CCATTCCGAG AAGAGGTGGC ATGCCGCCGA CTGGTCCTTC
ATGAAGAGTA CCGCTTTGAT GGCCGGCTTG GCTACAATCC TTCTCACAAG CCTTGGCAAC
TTCGTCCCTA GTCTTTGGTT ACCATGTAAG TCACACTTGT CCGGTTATGA AGCAACCGCT
CATTATAATC TTTCTAGCTT TCGCCGACGA TTTGAGTCTA ACGAAACCAA GCGGTACCGG
ACTTGTAGCT ATTCTTAACG CCGCTTCTGT CCCCGGTAAT GCTATTCTTG GGGTCATGTC
CGATCACATA TCTTTGCGTG TTGTAATCCT CATCTCGTGC ATCGGCAGCG GATTGGCTTG
TGCCTTCCTT TGGGGCTTTG GAACGAATGA CGGCATGCTT GTTGCATTCA CGATCGTTTT
TGGCCTTCTG GGCCCTAGCT TCTCTGCGTT ATGGACCAAG ATGAACGCTG TCATATCAAG
TAAGTAGTGC TATCGTCAAA CCATGTTGCA GATCCCTGAC GCATTGCTAC CAGAGGACAA
TCCTTTCGCC ATCACCATCG TTCTTTCGTT GTTCACCTTC ATCAGAGGAG TAGGTAATCT
GACATCTGGT TAG
|
|---|
| Protein sequence | MSEEVIELRN LNTLTERTTT VQRFEENRED NESVGSRKAD DTPSERSLAQ EDEENQGHEE
AVIQYALPPA DCGIRAWLFL AGATMMELLI WAIPTSVGVL HVYWTNELFE GRGTATLTLA
ATLHSGLVYM STALLGPLVV RATTWQKTIQ VVTWIISAAG LIASAFATQP WHLIVTFGII
YPVCGAAYLP CATLLFEWFV KARGTAMGIV YAGMGVGGAV CPFIIDGLLK RYSYKTTMIS
IGVGFGIIGL ISLIPIRHRI PPTSRSHHSE KRWHAADWSF MKSTALMAGL ATILLTSLGN
FVPSLWLPSF ADDLSLTKPS GTGLVAILNA ASVPGNAILG VMSDHISLRV VILISCIGSG
LACAFLWGFG TNDGMLVAFT IVFGLLGPSF SALWTKMNAV ISKDNPFAIT IVLSLFTFIR
GVGNLTSG
|
|---|
| |