| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI00420 |
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| Symbol | |
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| ID | 3259518 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006694 |
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| Strand | + |
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| Start bp | 102727 |
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| End bp | 106830 |
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| Gene Length | 4104 bp |
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| Protein Length | 1129 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638258526 |
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| Product | DNA-directed RNA polymerase, putative |
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| Protein accession | XP_572718 |
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| Protein GI | 58271124 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGCCCCTGTC AAGCGCACGG CGGCTTCATC CTCCACTACT GCTCCTCGAA AAGCTCCTCG
CGCTGGCCCA TCTACGACAA CAGCAACCGC AAAGCGGCCC GCCACAACTT CCTCAACAGT
AGCTAAGGGC AAAGCGCCAG CTCGACCGTC GGCATCTACA CAGGTCGATG TTAAGCCCAA
AATTGAAGAT ACTAGGGGAG AGGAGGAATG GGCAGATTTA ATGAAGCAGC AGTATGGCGA
TAAGAAGGGC GCTGATTGGT ATTCCAAGGG TGTGAAGACT GTCGAAGCAA GTATTCTCCC
TGAATGATAT AGACTTGAAC TGATACTGTT GCAGGATAAA TGGCAACTTC TCCCAGCTTT
TCTCAAAGTA AAAGGCCTTG TCAAGCAGCA TCTTGACTCC TTTAACTATT TTGTCAATGT
CGACATCAAA GCTATTCTTG CGGCCAACTC TCTTGTCATT TCAGATATCA ACCCCAAGTA
CTACATCCGA TATACCGACA TCCGTGTAGG GCGTCCAGCA CGACATGATG CTAATCAAGT
GGCCTCTGCT CTTTCGCCGA TGGAGTGTCG ATTGACAGAT TCCACATATA GCGCGCCGAT
CTATGTGGAT GTGGAATACA TGGGAGAAGA AAAGAGGAGC AAGCAGAGGG GTGTGCAGAT
TGGCATGTTG CCAGTAATGT TGAGGAGCGA TTTGTGTAAC CTCAAAGGGA AGAATGAGGC
GGAGCTAGCG AGGATGGGAG AGTGCCCGAT GGATCCGGGA GGATATTTCG TTGTTAAGGG
AACGGAAAAG GTCATATTGG TGCAAGAGCA GTTGAGCAAG AATCGTATCT TGGTAATGAA
GGATAAGAAG GATGAGGTGA TGGCTGAAGT TACATCGTGA GTCATTCATT CTTCGTATCT
CTATCGCCAT GGTCAGAAGC TTCAACCAGA CTGGGATTTT GGTCGGATTG GTCGAGCCAG
TTCAGTCTTT TTGAATTGCG GCCAGTCCCC TGATCAAAAC GAATTTGTTC GCGCCGAACC
AGTTGGAGGC TTGGTTTTTA AAACCACGCT AATTCGCTTT GGGACACAAT GGCTCGTTGT
AATGCTGATC ATGCACAGTT CAACGCACGA CCGAGTTGTC AAAACCTATG TCGTCAGTAA
AGCCAACCGT CTCTATCTCC GGCACAACTC TTTCAAGGAA TTCATCCCTA TCGTTATCGC
CCTCAAGGCT ATGGGTCTCA CTGCAGACAA GGAAATCCTC CAACTCATAT GCGGTTCCGA
CGAACGATAC CAGGAGGCCT TTGGTGTTTC CCTCGAAGAA GCTGCCAAGG AGAAGACCTT
TACGCGCCGT CAAGCGCTCG AATGGATTGG CGCCAGAGTA TCTCCCAACC AGGCTAAGGA
TGACAGCGGG TCCAACCAGA AGCTTACCCC AAGCGATATT GCCCAGCAGG CTCTTGCTGC
AATGGTTCTT GGTCATGTTC CTGTGCGAAA CATGAACTTC CGACCCAAGT GCATCTATCT
TGCCACCATG GCGCGAAGGG TTCTCATGGC CATGATTGAC GATCATATGG TTGATGATCG
AGATTACGTT GGTAACAAGC GTCTAGAACT TGCCGGTCAG CTTTTGTCTT TGCTCTTTGA
AGATTCTTTC AAGACTTTTA ACAGCGAGCT CAAAAAGCGA ATGGACAAAA TTCTGGAAAA
GCCCAACCGT GCCGGTCCTT TCGATGCCGG GACTCTGATT CGTCAAGGTG GTGATCCCAT
CACTCAGGCG TTTGTCCGTT CCATCTCCAC CGGCAACTGG TCGCTTAAGC GATTCCACGT
CGAGCGGGCA GGTGTTACCC ATGTCTTGTC TCGTTTATCC TTCATTGCCG CATTGGGTAT
GATGACTCGT ATCTCTTCTC AATTCGAAAA GACGCGTAAG GTCTCTGGTC CTCGTGCTCT
TCAACCGAGT CAGTGGGGTA TGCTCTGTCC TTCCGATACG CCTGAAGGTG AAGCATGTGG
TCTTGTGAAG AACTTGGCTC TTATGACCCA CATTACTACG GACGTACCTG AAACGCCCTT
GGTCAAGATG GCGTTCATGC TTGGTGTTGA GGATATTTCC CTTGTTACCG GTAATGAACT
CTACCGGCCC GGAGTGCATA TGGTGCAGGT GAATGGTACG CTCATCGGTG TGACCAACAT
GGCGAAACGA TTTGTGAGAC AGTTTAGAAA GTTGAGGCGA GCTGGAAGGA TGTCTGAGTT
TGTGTCAATC TTTATTAACC ATCACCACAA GATCATCTAC ATTGCAAGTG ATGGTGGACG
AATTTGTCGA CCGATGATTA TTGTTGAAAA GGGAAGATCA CGAGTGACAA CGGAGCATGT
GAGGCTTTTG AAAGAGGGCA AAGTCACTTT CGATCATTTC CTCCGAGCAG GCTTGGTGGA
ATACCTAGAT GTCAACGAGG AGAATGACTC TTTCATCGCG TGTTACGAAA ATGAGATCGA
AGAAGGAACA ACGCATCTCG AAATCGAACC ATTTACTATT CTCGGTGCTG TCGCCGGTTT
GATTCCTTAC CCTCACCATA ACCAATCTCC TCGAAACACC TATCAATGTG CGATGGGTAA
ACAAGCTATT GGCGCCATCG CATACAATCA GCTTAACCGA ATTGATACCT TGCTGTATCT
CATGACATAC CCTCAACAGC CCATGGTCAA GACCAAAACG ATCGAGCTGA TCGGCTACAA
CAAACTTCCC GCCGGGCAGA ATGCTACAGT CGCTGTCATG TCTTACTCTG GATACGATAT
CGAAGATGCT TTGATTCTCA ATCGTGCCAG TGTAGACCGA GGTTTTGGTC GATGTCATGT
TCTCAAGAAG GTGACAACGC CAATGCGAAC GTTCCATAAC GGTTCACATG AACGTACTGC
TTATCCTGAT CCTCCTCCTC GACCCGACGC ATATACTTTT GTTGATAAGG CCGATGGCAT
GACCGCTCCC GGTGCTACTA TCAACCAATA CGACGTGATG ATCCATCGAG AAACCCCTGT
CGATACTCGT GGTGGTGGTG CGGACACCCA GCTGTACAAA CCAATGCCTG TCACCCACAA
GACACCTGAA CCGATTTTGG TTGATAAGGT GATGCTAACA GAGGGCGAGG ATGGTGCGTT
GATCAAAATC TTGACGAGGC AGACTCGAAG GCCAGAACTG GGTGACAAGT TCTCTTCGCG
ACACGGTCAG AAGGGTGTTT GTGGTTTGAT CGTGCCCCAG GCAGATATGC CATTCAATGA
TCAAGGTATT GTACCTGATA TCATCATGAA TCCTCATGGT TTCCCCTCTC GAATGTATGT
ACTTCCTTTC TGTGGTTCAG AAGCAACGCT AACGACCATA TAGGACTGTC GGAAAAATGA
TCGAGCTCCT TTCTGGTAAA GCCGGTGTCG TCGCTGGTAA ACTCCAATAT GGCACTGCAT
TTGGTGGTTC CAAGGTCGTC GACATGTCGC AGATCCTTAT CGACAACGGT TTTTCGTATG
GGGGTAAGGA TATGTTAACC AGTGGTATCA CCGGTCAGCC GATGGAAGCC TACGTCTACT
TTGGACCTAT TTATTATCAG AAACTTAAGG TATGCCTCTT GCATCTCGCC CAAACCATCA
GGGACTGACA AGAATGATGT AGCATATGGT CATGGACAAA ATGCATGCTC GACCTACTGG
TCCACGAGCT AATCTTACTC GCCAGCCTAC TGAAGGTCGT TCGAAGGACG GTGGTCTCCG
TCTAGGTGAA ATGGAGCGTG ATTGTTTAAT TGGTTATGGT GCCACTCAGC TTTTGTTGGA
ACGTCTTATG ATCTCCTCCG ATGCGTTCGA GACTCAAGTA TGTGAGAGCT GTGGTATGTT
GGGATACAAT AACTGGTGTC CCAAATGTAA GAGTGGTAAG GGGGTTGTAG GGTTGACCAT
TCCGTATGCG GCCAAGTTGT TGATACAGGA GGTAAGTTTT CGTTTTCCTA GTAAATGACA
CGATGAAAAC TGACAAACGA AACAGCTGAT GGGTATGAAC ATTATGCCCA AGCTTTGCTT
GGAAGACACT GTCTAGAGGT GAATTTAGGA AGGACGAGCA GTTTTCATGA ATCTACGGTT
TATATTATGC ATGACATTAT GTTT
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| Protein sequence | MKQQYGDKKG ADWYSKGVKT VEDKWQLLPA FLKVKGLVKQ HLDSFNYFVN VDIKAILAAN
SLVISDINPK YYIRYTDIRV GRPARHDANQ VASALSPMEC RLTDSTYSAP IYVDVEYMGE
EKRSKQRGVQ IGMLPVMLRS DLCNLKGKNE AELARMGECP MDPGGYFVVK GTEKVILVQE
QLSKNRILVM KDKKDEVMAE VTSSTHDRVV KTYVVSKANR LYLRHNSFKE FIPIVIALKA
MGLTADKEIL QLICGSDERY QEAFGVSLEE AAKEKTFTRR QALEWIGARV SPNQAKDDSG
SNQKLTPSDI AQQALAAMVL GHVPVRNMNF RPKCIYLATM ARRVLMAMID DHMVDDRDYV
GNKRLELAGQ LLSLLFEDSF KTFNSELKKR MDKILEKPNR AGPFDAGTLI RQGGDPITQA
FVRSISTGNW SLKRFHVERA GVTHVLSRLS FIAALGMMTR ISSQFEKTRK VSGPRALQPS
QWGMLCPSDT PEGEACGLVK NLALMTHITT DVPETPLVKM AFMLGVEDIS LVTGNELYRP
GVHMVQVNGT LIGVTNMAKR FVRQFRKLRR AGRMSEFVSI FINHHHKIIY IASDGGRICR
PMIIVEKGRS RVTTEHVRLL KEGKVTFDHF LRAGLVEYLD VNEENDSFIA CYENEIEEGT
THLEIEPFTI LGAVAGLIPY PHHNQSPRNT YQCAMGKQAI GAIAYNQLNR IDTLLYLMTY
PQQPMVKTKT IELIGYNKLP AGQNATVAVM SYSGYDIEDA LILNRASVDR GFGRCHVLKK
VTTPMRTFHN GSHERTAYPD PPPRPDAYTF VDKADGMTAP GATINQYDVM IHRETPVDTR
GGGADTQLYK PMPVTHKTPE PILVDKVMLT EGEDGALIKI LTRQTRRPEL GDKFSSRHGQ
KGVCGLIVPQ ADMPFNDQGI VPDIIMNPHG FPSRMTVGKM IELLSGKAGV VAGKLQYGTA
FGGSKVVDMS QILIDNGFSY GGKDMLTSGI TGQPMEAYVY FGPIYYQKLK HMVMDKMHAR
PTGPRANLTR QPTEGRSKDG GLRLGEMERD CLIGYGATQL LLERLMISSD AFETQVCESC
GMLGYNNWCP KCKSGKGVVG LTIPYAAKLL IQELMGMNIM PKLCLEDTV
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