Gene CNI00230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI00230 
Symbol 
ID3259501 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp59343 
End bp61061 
Gene Length1719 bp 
Protein Length300 aa 
Translation table 
GC content48% 
IMG OID638258507 
Producteukaryotic translation initiation factor 2 alpha subunit, putative 
Protein accessionXP_572732 
Protein GI58271152 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1093] Translation initiation factor 2, alpha subunit (eIF-2alpha) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.433033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGGCGACTCG CTTCAACACT CCATTTTCAC TCTCCGTCTT CTATCGTGCA GCCCAAAATC 
ATCTGTGGCC GACGACCTCT CGCAGAACAG CTGGAACGAA ATTCCCTCGA CTTCAGCGCC
TCAAAAAATT GTATCAGGAG GATATTGAAA TCCGACTCGT TGCCACACAT TTGGCCTATT
TCAAACGTCC AGAACTAGAG ATCCGCCACC CATCAACGCT TGTGCAAGAT GCCCCGATTC
TATGAGAACA AATATCCCGA GGTGTGTTTG CTTATGGGAG CAGGAAAAAG AGACGTGGAG
ACTGATGATC ATTTATGCGT GATAGGTCGA CCAATTGGTC ATGGTCCAGG TCCAGTCTAT
TGAGGACATG GGTGCCTACG TCAAGCTCGT GAGTGAAGCA GTATCAGTTA TTCTAAGGAA
TATTTCTGAT CGCTGCTCAT AGCTTGAATA CGACAACATT GAAGGAATGA TCCTTCTTTC
TGAGCTTTCT CGAAGACGTA TCCGATCAGT CCAGAAACTC ATTCGAGTGG GACGAAACGA
AGTCGTTGTT GTGATGCGTG TGGACCCCGA CAAGGGTTAG TTAAGCTGCC GAGTCGAAGT
ATAGAATCAT ATTGACAAAA ATCTTTTCAG GCTACATTGA TCTTTCCAAG CGACGAGTTT
CTGCGGAGGA GGTTGTCAAG TGTGAGGAAC AATACGAGAA GGGCAAAGCG GTCGACTCTA
TCATTACCCA GGTCGCTAAG AAGCGAGGTG TTACTCCGGA ATCATTGTAC GAAAAGATTG
CTTGGCCTTT GCACCGACAA TACGGACACG CATACGAGGC TTTCAAACTC TCCATCAGGT
AGGTTCAACC TTCTTTCAGA CCATCATTCT GTAAGGGGCG CGATGCTAAC GAACTACATA
GCGAACCTGA GGCTGTCTTT GGCTCCCTCG AACTTGATGA AGAAACCCTT GCCGATCTCC
GATCCGGTAT TGCACGACGA CTTACTCCCA AACCCGTCAA GGTTCGCGCC GATATCGAAG
TCAAATGCTT CTCCTATGCC GGTATTGACG CTATCAAACG TGCTCTTACT GCCGGTGAAG
CCGTCTCTAC CCCTGACGTA CCTATCAAAG TCAGATTGGT CGCTCCTCCG CTTTACGTTA
TGAGCACGAC AAGTACGGAC AAGAATGCGG CGATAGAGTT GATGGAGAAG GCGGTTGAGG
TTATTGGTGA GACTGTTAGG AAAGACAAGG GTGATATCAC TATCAAGATG AAGGTGAGTT
TTTTCCAGTC GTCTTGTATG ACAGGTTGGA AGATGTTAAC GGAACCCGTC TACAGCCCAA
GGTTGTTTCC GAGACCGAAG ATGCAGAGCT CAAAGCTCTT ATGGAACAGT TCGAAGCAGC
CAACATGGAC CAGGCGGGTG ATGACGAATC AAGCGAGGAG GACGAGTAAA TGCTGTTCAC
TAGAGTGTCG GCATTGGCGT TGTGTTGTTG GGCATCTCTA TGTGTCTAGG CTATGATAGA
ACATGATCAT GTTGGGTCTT CATTTGGAGC CAATTTAGGG GTTTAGAGTT TTTGGGTGAG
ACGGAAGAGT TTGGCGAGGG AGTTCAACGG TTGGACTCGG GGTAGAGGAA TGAGAAATCA
ACTTGTGCAT TTCTTAGACC GTCATAAGGG AAAAGAGCTT GCATCTTTGA GCAAGATAAC
AAAGGCTTAG TTTTGGGGCG ATGGTAGATG CATTTTCAA
 
Protein sequence
MPRFYENKYP EVDQLVMVQV QSIEDMGAYV KLLEYDNIEG MILLSELSRR RIRSVQKLIR 
VGRNEVVVVM RVDPDKGYID LSKRRVSAEE VVKCEEQYEK GKAVDSIITQ VAKKRGVTPE
SLYEKIAWPL HRQYGHAYEA FKLSISEPEA VFGSLELDEE TLADLRSGIA RRLTPKPVKV
RADIEVKCFS YAGIDAIKRA LTAGEAVSTP DVPIKVRLVA PPLYVMSTTS TDKNAAIELM
EKAVEVIGET VRKDKGDITI KMKPKVVSET EDAELKALME QFEAANMDQA GDDESSEEDE