Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI00130 |
Symbol | |
ID | 3259609 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | + |
Start bp | 38022 |
End bp | 40316 |
Gene Length | 2295 bp |
Protein Length | 455 aa |
Translation table | |
GC content | 53% |
IMG OID | 638258497 |
Product | polyadenylation factor 64 kDa subunit, putative |
Protein accession | XP_572946 |
Protein GI | 58271580 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.232022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACAAAAACCA CGAATCCGTC CGACATCCAC GTGCCATGCC CCCCAACGCC TCCAAGACAG TCTTTGGTGA GTATCCCATC TCCCATACTC GTGCATGTTC TCTGACCTGC TCTGGCAGTC GCAAATATCC CATAGCAAGT TCTCTTCAGC TCTCTGTATA CAAAGCGCTA ACCGTAGCTT TCGACATCTT CTCTCTACCC TTTACCCGCT CATAACACTT GTACGGAAAC TATACTGTGG CGTGGATCAA CAGCGATGTA TCCGAAGAAC AGCTTGCCAA CGTCTTTTCA GAGGCTGGGC CTGTAGCCAA CGTCGAGTAT GTCTCACTTC CTTTCCTTTC ATCCATTCTT ATCCCTTCGA AAATGAACGG CGCTGACTTG GCTGGATAGA ATCAAGTTTG ATGCCAACAC TGGTAGATCA AAAGGTTATG CTTTCGTGCA ATTCTATGGT CAGTAGTGTT CGTCATACAC CGTGTGTGGC TAAAGCTAAA TGCTTTCCCT GTCTATCCCG ACGCTCAACT ATGCTCGCCC CTCATGAAAT CTTCCCCTCT GTATCCCCTT GGATTGATTG GATTATACGA TCTAAATAAA CAACACAACG ATCTCATCCG TCCCATCTTC GTTCCATAAA CCCAACTCTT TTCTTCTACT CTCAATAACC GCTACACACG CCCTCATCAC AAACAGACGA AGCAACTGCC CTCTCCGCTG TGCGCAACCT CCAAGACGCA CCCGTAAATG GGCGAAACCT CCGTGTAGAA CTTTCAACCG ATGAACCTGG TCCCCGTCGG CGCGGTCCTG GTCCTGGTGC TGTAGGTGTG GGTGCTGCTC CTGGAGCCGG TGGACCCGGA GTCGGTGGAC CCTCTGCATC CCTCGGTGGT CCTCGGCCCA TGGTCCCAGC ACCAGGTCCA GGTGGTGCTC CTCCCTTCAC CAGCACCGGC GCCGGCGCAC CCGGTTATCC TCCCCGAGCA CCATTCGACC CCCGTTATCC CCAAGCCCAC TCTCAGTCAC ACGAGAACAC CCCTCCTCCC GCCGGTGTCG GCGCTAGAAG ACAAGGCGGG GATGATATCG ATTTGAGGAT GGCGCCTCAG GGTATAGACT TGCTTCCAGG ACAAAAGGCG GTGGATACGA TAAGCAAAAC TTTGGCGGGG ATTGCGCCCG GTCAAATGGG GGATGTTATG ACCAGTATGA AGGTGCGCCA AAATCATCCT TTCCCACTTT CCTTCAACTG CCAAGAAAAA AAAAGAACAA AAGCTGACCT TTGAACGAAA TAAAAAATAA AAAAATAGTC GCTTATCCAA ACAAACCCTG ACCAAGCCCG CCAACTCTTG AGCCAACAGC CCCAACTCGC ATACGCCCTC TTCCAAGCTA TGCTTCTTCT CAACCTTGTC GACCCTTCTG TTCTGTCTAG TATCCAGCCT TTGGCAGCTT CCGCTTCTGC AGCTGCTTCT GGTGGGGCTG CGTCTGTAGC CCCCGGTCCT GGTGGTGCAG GTGCAAGAGC ACCCAACTAC CCACCGTACC CCCCTCCGAC CCAAACCCAA GGTCCACCTG GCGGCCAACA AGCCTTCCGT CCTCCGCCCC AAGCCCTCTA TGGAGGCGCA CCCCCTCTTC CCAACCAAAA CCAAAATCAG AACCAAAACC AAAACCCTCC TTACCCACCC TATCCCTCTG GTCCCGGCGT CCCCGGGGGT GTGTCTGGTG CCGGTGCCGG CATACCACCT CCCACTTCTA CACCCGTACC TCCCACCCCG CATCCCGCTC ACGCCGTCCC AGTTGGTCCA CCCGGTGGAC CCGCACCACC AGCCCCAGGA TTGGCATCCC TCCCCCCTGC GGCGCAAGCC GCACTCTCCA CACTCCCTCC TGACCAACAA CAGATGCTTC TCCAGGTTTT ACAGCTCTCG CCAGCGCAGA TTGCGGCGTT GGATCCGACG CAAAAGGCTT CAGTCATGCA ACTCGTGAGT GTTCCCTTCC CTCTCTCTCT TTCGTTCACC TTTTCCTTTT TTGCTGTTAC CTCCCCTGCC TCTCCGTCTC TTGGCATTGA TTAATAGAAA CTGATGAAAT TTGTTTTTGG ACCCGTTTAG CGACAACAAT TCCTCGGGAC TGCTTAGACA TAAAAGAAAG AAAAAAAGCA GAGATACTTG TCCCAAAAAT GCATGTGTGT GCGTGAGTGG GTCGGGAGAG AAATATGGCA GGAAGATAGT GAGGAGAAGG AAAGTTCCAG AAGAATGGGA ATGATACAAG TTAGACACAA CAACGAGAGT GGGGGGACCA CGACATATAG CGCAAAGGAG CAAAA
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Protein sequence | MPPNASKTVF VANIPYDVSE EQLANVFSEA GPVANVEIKF DANTGRSKGY AFVQFYDEAT ALSAVRNLQD APVNGRNLRV ELSTDEPGPR RRGPGPGAVG VGAAPGAGGP GVGGPSASLG GPRPMVPAPG PGGAPPFTST GAGAPGYPPR APFDPRYPQA HSQSHENTPP PAGVGARRQG GDDIDLRMAP QGIDLLPGQK AVDTISKTLA GIAPGQMGDV MTSMKSLIQT NPDQARQLLS QQPQLAYALF QAMLLLNLVD PSVLSSIQPL AASASAAASG GAASVAPGPG GAGARAPNYP PYPPPTQTQG PPGGQQAFRP PPQALYGGAP PLPNQNQNQN QNQNPPYPPY PSGPGVPGGV SGAGAGIPPP TSTPVPPTPH PAHAVPVGPP GGPAPPAPGL ASLPPAAQAA LSTLPPDQQQ MLLQVLQLSP AQIAALDPTQ KASVMQLRQQ FLGTA
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