Gene CNI00060 details

Gene Information

• Locus tag: CNI00060
• ID: 3259808
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006694
• Strand: +
• Start bp: 17697
• End bp: 19727
• Gene Length: 2031 bp
• Protein Length: 409 aa
• GC content: 45%
• IMG OID: 638258490
• Product: oxidoreductase, putative
• Protein accession: XP_572748
• Protein GI: 58271184
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATTTCTAAAC GCCTCTTCCC GACTCACTTG GAAAGTTCCC CCTTTTTTTT CCCTCCAAAT 
AGTATGACAA AATCCCTTTA CTCTCTTTTC TCCATCATCT TGCTATTCGC TGTATCGTCC 
TCGTTCGCCT TTGCTTCACC CCAAGCACAA TATCACCAGC ACGCCATGAC GACCTCCCAT 
CTCTTATCTG TGCACAATGA CAGTAGCGGG CATAACCACA CAGCACCATC ACTCGAAACA 
CTCATCGTCA CCGTACCCGT CTCCGCTGAG AAACTCGCTG AGGTCAAGAC TCACTTCAAG 
ACAGTACATG TTTTTGACGA AGGAGAAACT GTCACGAAAG AGGCGGCGAG AGAGGTAGAG 
GTTTGGTACT CGAATTACTT GGGTATTCCG AAAGAGATTG AGTATGAAGA TGTACCGAAC 
TTAAAGCTTG TTCAATTGAC TAGCGGTAAG TCTCAGTCAC CTTCGATTGC TCCTTCACAA 
CGGAACTGAA CTTTATTTTT GCAAATAGCG GGCGCCAACC TCGCCCTAAA CAGTCCAGTT 
TTGAAGAACG AAGAGGCTCG TAAGAGAATT GATATCTCCT CCGCTTCAGG TAAGTCATCT 
TTATTTTGAT CAAAAAGATG ATTGAACCTT TGGATGTAAG CTGATAATTC TCGCCTCGAA 
ATTACCAGGT ATTCACGCCA TCAGTATTCC TCAGTGGATC ATCTCGCAGA CTGTCAGCTG 
TAAATGATTC TTCTTAATCT CTGCAACATC CTCGATGGTC GATTAAATAT CGGTTACTAA 
CGACTTTGAT GGATAGTATA CATGCACCTT TACTTGCAAA CTTTTAACCT CCGGGTAAGT 
CTTGATTTTT ATCAATCTAC TGAGCTAGGC CCATTAACGA ATGTTTCCGG CATGCTATAT 
ACTTCATCTA CAACAGACAA ACCAGACATG GAGTCGTGAT ATCCCACAGC TACCTCAACT 
TAACGGTATA AAGCACGGTA ACAGTGGTAA ATCACTGTAT GGAAAGACCG CTGGTCTTTT 
GGTATGTCCC TCTGTCCCTT CTTTCCTCGC TCCTACCTCC ATATTTCGCT TTAGTTCTCA 
TATATCTTGA ACTAATGGGG GGTGGTGATA GGGCTACGGA CACATTGGTC GAGAGACCGC 
CAGACTCCTC AAAGCATTCA ACGTCAACAT CATTGCTGCC AACTCGAACG GCCAGAAGCG 
AGGAGATGAC GGATATCTTA TCCCTGGTAC AGGGGATGCT GATGGTACGC TTTTTTTTTC 
ATTCCTTTTC CCCATTCCCA TCTGCCTTAC TTTCCATTTC TTCTTACCAG TCTAAAGTCG 
AGGTATTAAC ATTATGTTTT GTCAACAGGA TCCATTCCTT CCGCATATTA CTCCACTTCT 
GACGAAGAGT CTTTCAAGAC GTTCTTGAGC AAATCAGACA TCCTTATCGC GAGTTTACCT 
TCTACCCCTC AAACCAGATA CTTGCTCAAC CAGGAGCTCC TTTGTAAGTG CTTTTTCCCA 
CTCGTTATCT TCTTTCAAAT CGAGACTAAA GCTGATAATA TCCTCTCCGA TCTTTCGCAG 
CTCTGCTTCC CGAAGGCGCA GTATTCCTCA ATGTAGGCCG AGGCGACCTC GTTAAATCCG 
AAGACCTCCT CGCAGCCCTC GCATCTGGCC CCCTCTCTGG CGTTGCCTTG GACGTTACCG 
ACCCCGAACC CCTCCCAGAC TATCACCCAT TATACTCTCA CCCGCAAGTC ATCATCACAC 
CGCATACGAG CTCAAATATA GAAGGATACT TTGATGTGGG TGCGGATTTG TTGATTGAGA 
ATGTAAGGCG GGTGAGGAAG GGAGGTAAAG CGATCAATAA GGTTGACCCA GAGAAGGGTT 
ACTAAGGTTG TAAGGTACCT TCTCGTAGAA ACGCAAGGTA AGAAGAATAC AGGAGGGAAG 
AGAAAGAGTG TGAAGCATTT TTGTAGTGAA TCTGCTTTGG TAGTAATGAT TTCGTTGGGA 
CATGGATATA TTGGTTTTTA TATGATAGAT ATGCACATTG AAGGATTTCC G 

 

Protein sequence

MTKSLYSLFS IILLFAVSSS FAFASPQAQY HQHAMTTSHL LSVHNDSSGH NHTAPSLETL 
IVTVPVSAEK LAEVKTHFKT VHVFDEGETV TKEAAREVEV WYSNYLGIPK EIEYEDVPNL 
KLVQLTSAGA NLALNSPVLK NEEARKRIDI SSASGIHAIS IPQWIISQTV SLYMHLYLQT 
FNLRTNQTWS RDIPQLPQLN GIKHGNSGKS LYGKTAGLLG YGHIGRETAR LLKAFNVNII 
AANSNGQKRG DDGYLIPGTG DADGSIPSAY YSTSDEESFK TFLSKSDILI ASLPSTPQTR 
YLLNQELLSL LPEGAVFLNV GRGDLVKSED LLAALASGPL SGVALDVTDP EPLPDYHPLY 
SHPQVIITPH TSSNIEGYFD VGADLLIENV RRVRKGGKAI NKVDPEKGY