Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH03770 |
Symbol | |
ID | 3259046 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | + |
Start bp | 29944 |
End bp | 32611 |
Gene Length | 2668 bp |
Protein Length | 610 aa |
Translation table | |
GC content | 49% |
IMG OID | 638258107 |
Product | expressed protein |
Protein accession | XP_572537 |
Protein GI | 58270762 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000218596 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGGAGTGCTT CTATAAGATA CTAAATTTGA ACATGAGACG GTAAAGAACA AGTATGGCAG ACAAAGAAGA ACTACAAGAA CGAACTAAAG TGGCTAGACA AGAGTATAGA GAATATCTAC CGCTTGCACA GCAACTCCAA GGAGATCTCC GAGACGACGC CGAACAACTT CGGGTACAGG AAGGCTGGGA TGAAGATACG TGGAATGGTG TTGAAGAGTG GGTTGATGAT GTGGGAAGTA TATGGAGAGC TTTAAGAGTA AGTCTTAGTT TGATTTCGTA TCATCTAAGC TTGACTAATG CGACATTGCA GAGAAACCGC TATGACCAAA ACAAGACACA CTCATTCCTC CTCTCAGTCC TGTCGACTCG TCTTTCTCTC TCTTTACACG GCCCTATCCC TTCTATCCTA CCATACTCGG ATTCCCCTCT CTTCCACATC CTCCCCCTCC CTTCACACAC CGATAAACTC AACAGACCAA TTGTCGTTCT CACCGCGCGC GAAATTGTTA GGGACGAACA AGGAATGCTA GATGATGTCA AAGAATGGAT ATGGTGGGCT TTAGAAATGT GTAGGAGGAC ATCTAAGGAC TGGTGGAGTA AAGGGATGTG GGACGGAAGT GGGGTGGATG GGTATGGGAG GGGAAAAGGG AAGGCGAGGG GCGAAGGAGG GGAAGGGATT GTCTTGTTGG TTGATGCAGC CGGTGCGGGA TATCGAAACC TTGTAAGTGC AATAAAAGTC ACGTATCCAT TCATGCCAGG GGCATTATAA ATTGAAGCAA TTGCCTGTTT CTAGGAGGTT GATCTACTGC CTACACTACT TTCCGTAGGA CATAACAGCT TTCCGGGCCT CCTCGAGGCG GTATACGTTA TCAACGTTGG ATGGACAGGG CGAAGCATGT GGGCCGTTGT CAAGCATTTG CTCCCCAAAT CTGCTTTAGA AAGGGTTGCA TTCCTGGACA CGAAAGAATC ACTAGCCGAA GTCTTCGAAC TGGACAAGAT CCCACAAGGT ATGTGCATAG CAGTGTCCCT TGTAATTGTG TGATCTTCAA TAACGCTGTA CACAGCATAC GGTGGCGACA GCCCTTATAC ATTCTCGCCC TCTAATAATC CCATTTACGC ATACTATTCC CGCCACTCGA GTCATTCGTT TATTGCCTCC ATTTCCAGAA GCACATCATG CACCTCTATA GCAGACGTAT ACTACACAGC GCGCAACACG CCTTTTCCGA GCCGCCGAAC GTCTCCATTG ATTAGTAGGC AGAATAGCGC TTCAAGTGGT ATGATGAAAG CCATGTTTCG AGCGGGGTAT GGAAATGATT TGAGAATGAC CAAGAGTCGT GATGAGAGAT CCCGAAAGGT GGAGGGAGAT GATGATGGCG ATGAAGAGGA TGAGATGACC AGAGTCATAT CTGCATCTGA TGTTGCCGCC GTAGGCCCGA TGACGGGTCT TATAACACAG TCCTTGACCG AACCGGAAGA TCCACAACCG ATTTTATCCA GGGCAAGTAG TACCCTCACG TCAAGAAGTA AACCACCTAC TCGAGCTCCC TCGTCCGCAG CGGTCTCACG CATCAAATCC CTCTCCGACT TTCATCTCTA TCTCTCACCT TCTCGATTAG CGCGTATCGA TCTTCTCTCT GACTCTTCTG ATTCGGAAGA TGAGCCTCCC CCTCCACCTT CTATCCCTTC GCTTCCTCGT CGCAAAGTGC TTCGCCCGGC GCTGCTGGAA AAGAGCCTAG CAGGAACGCC TGACGAGCGC GAGAAAAGAA CTAATAGACC CGCTTTGCGG TTGATGGGCC TTCCAGGTCA TTTGGCGGAT GATGATCCTG TGCGAAGCTA TTCGGGAAGA TTGCAGATGC ATCATGCAAA GTGGCTGGAG GGATGGAAGG GAACTCCGGA AGAGCTTGGA CTGGAAGATA ATCATAAGCT TGGCGGCGTA AAACATGAGG AAGAGGAAAA CGCCCCGATA CCGAGAACAA TATCCGTTTC ACCACCTATT GATCGTCCTC CTTCACCTTC CGGCACTCTT GAGCCATCTC CGTCACCGTC TCCCATCCAT TCTCCCGCAA TGACACCACA ACCTCATGAC ATCCAGCCTT ACTCCACCTC AAATCCTTTC TTCGGTTATC CAGTAGTGCA ATTTGGCAGC TCTATCAGGC CAAGATATCC TCGTAACAGG AAACGTGATC TTGTCAAGAC GCTCTTGTTC CTTTTCATGC TAAAGTTACA GAGCTGGAGG GATTCTGTTG AAAGAGCTCT AGGCTTGAAC CGTCTACGTA TCCCGTCCCT TTCCCAACCT TACTGCTCGT CCTCACTTTA TACTCCTGGG CCTAACAGGA GAAACCCCGC CGAGGGTCTT GTTCGCTCTG CGGCAACGCC CGGCACGTAC TCGAAGCAAG TCGCGAAATA TAGAAGATGG GATAAAGATT GGTGGTGGAT GATTATTGGG ATGCTGTTGT TGAGAGGAAC GTGGGGAAGA ATTGTGCTGG CACCGTTGGA GGCATTGGGA CTGGGGTTGT CTGAATGGAA GGCTATATGG GGAGCAGTAT GACACAAGAG CGGTGACACA AGAGCCGCGT GGTGTGATGG AGAGCTCCGA TGTTTTGTTG TGGTAACTGC TGTTGGACCT TTCATATGTA CTCGCCAGGT TGTATTCATT GTCGTCAT
|
Protein sequence | MADKEELQER TKVARQEYRE YLPLAQQLQG DLRDDAEQLR VQEGWDEDTW NGVEEWVDDV GSIWRALRRN RYDQNKTHSF LLSVLSTRLS LSLHGPIPSI LPYSDSPLFH ILPLPSHTDK LNRPIVVLTA REIVRDEQGM LDDVKEWIWW ALEMCRRTSK DWWSKGMWDG SGVDGYGRGK GKARGEGGEG IVLLVDAAGA GYRNLSRDER SRKVEGDDDG DEEDEMTRVI SASDVAAVGP MTGLITQSLT EPEDPQPILS RASSTLTSRS KPPTRAPSSA AVSRIKSLSD FHLYLSPSRL ARIDLLSDSS DSEDEPPPPP SIPSLPRRKV LRPALLEKSL AGTPDEREKR TNRPALRLMG LPGHLADDDP VRSYSGRLQM HHAKWLEGWK GTPEELGLED NHKLGGVKHE EEENAPIPRT ISVSPPIDRP PSPSGTLEPS PSPSPIHSPA MTPQPHDIQP YSTSNPFFGY PVVQFGSSIR PRYPRNRKRD LVKTLLFLFM LKLQSWRDSV ERALGLNRLR IPSLSQPYCS SSLYTPGPNR RNPAEGLVRS AATPGTYSKQ VAKYRRWDKD WWWMIIGMLL LRGTWGRIVL APLEALGLGL SEWKAIWGAV
|
| |