| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH03600 |
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| Symbol | |
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| ID | 3259130 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | - |
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| Start bp | 70998 |
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| End bp | 73911 |
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| Gene Length | 2914 bp |
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| Protein Length | 863 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638258123 |
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| Product | pseudouridine synthase, putative |
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| Protein accession | XP_572522 |
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| Protein GI | 58270732 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCC AAGAAAACAC TCAAAAACGT CCAGCAGAGG ACACGGAGAA GCAGGATGTA
GAGGCTAAGA GATTCAAGGC AGAAGAAATC GCCCCCTCCA ACACCCCATC TCTCACAGAC
CACCTTAACG CTCCCCACCG AACAATCCCC AACCCAGTAT CCAAGATGGG ACTCGTACCC
GCCATCCCAG ACCTTCCTCC TAGTCTGAAG ATGGTCACTG GTATTGAAGC TGACATGGTT
GCTCGCCGTG GGTTTGTCGG TGAGGAAGAA TGTGGAATCC GAGGATTCGT AGGGAAGGGT
AAAGGTGTGA GGGGTGTGAT CAAACAGCGG TGCGTAAGTA TCTCTGAGGG GGTATACAAC
TTGAAAAATT GAGTGAGCTA ACTTTTTGGG AAGGTTTACG GATTTCCTGG TCAACGAAAT
CGGCCTTGAT GGCAAGGTGT TGCATCTCAA AGACATCACC AAGCCACAAG AACCCGGATC
CAATGAAAAG GATAAAGAAG CCGCGACTGT TACTGAAGAA GAAATTGCCA ATGGCCAAAC
GAAATCCACT ACTGAAGTCG CATCCCAGAG CGAAGAACCC GAAGTCGCCG TTGACCTTCC
CGAGAACCTT CGTTTTGCTG CCCACCCTCA GTGGAGCACA AGTACTACTC TCAAGCTTCG
TCCCCACTTT TCAGATGAGA CCATCATCTC TCTCCACCAA CTCGTTGAGC AAGGAAAAGA
TGCACCCCCC AAAGGCGATT CCGGGTGGGG CGGAAGGAAG AAGGATACCG AATCAGCAAG
TGAGGAGAAT GCCGAGAGAG AGGAAGAAAA GAAGGAGGAA GGGGAGGAAG CTGCCTTCAA
TGATAGTGCA AGTAAGGGAC GAGGGCAAGG CAGGGATCGT GGAAGGGGAA GGGGGAAAGA
ACGTGGAAGA GGCCGTGGCG GGAGAGGCGG ACGAGGCGGG GGACGCAATG CCGATTCAGG
CAGTTGGTGG TTGACATACG AAGATGAGCG CGAGGTTCTC TCACAGGTGC ATCTCTGACC
CGATTCACAT GGCTATTATC CAAAAAACTG ACACAAATTG CGTAGCCTGT CATTTCCAAA
GAAGAGCGTG CAGCGGCTCA CAAGATTCTG CGCGAAGTCT TTCCTGGGAT GTTTGAAAGC
TCAACCAGAG AAGTAAAGGG CGAAGAAGGA CAAAGGCTGG TTATCAAGTG GTCCAGTGGT
GCGGGACAAA GCAGTTTCCA CGGCAAAGGA GCTCGTCGGG CACCTGGTGC GTGTATTTCA
ATATTTATTT ATTTTTTCAT TCGGGCTCTG ATTAATCGAA TCAAAAGACG CGCCCCGTTT
ACCCGCCTAT ATCCACTTTA CTTTGCACAA ATCCAACCGC GAAACCATGG ATGCTCTCTC
CCACCTCCAA CGTCTCCTCA ATGTCCAAGC TAAAGACCTC ACCGTGTGCG GTACAAAAGA
CAAACGAGCC GTCACTGTCC AGCGTGTCTG CCTGAAACGT TCAGGACGTA ACCTCCAAAC
AGTCTGGCGA GCACTCAACG GCGTCAAACA AGGTTGGCGG ACTGAGCAAC AAGCGGTTGA
GGAGAGAGGT GATAGGGGTG TCAGGGTTGG AGATTTCGAG TACTCTGACA AGTATTTGGA
ATTGGGGATG TTGAAGGGGA ATAGATTCTT GATTACATTG AGAAATGTAG AGGCGGAGAG
TGTGGAGGAG ATTGATCGGA CTATGGAGAG CGTGAGAGAT CTTGGGTTTA TCAACTTTTA
TGGTAAGCTT TCTCTCTTTG CACCAATTCT TATCGCTCTT TTCTGCTAAC ATGTTCTCTC
GTCCAGGTAT GCAGCGCTTC GGCACCTCCT CCATGCCAAC CCATGTTACT GGCCTCTTCA
TCCTCCGCTC CAACTGGTCT GCAGCCCTCG ATTCTCTCCT CTTCCTCCGT GAGGGTGAAC
ACCCCGATTG TGTAGCCGCT CGTCTGGCGT GGTTGGAAGA TGGCGATTAC GTCAAGGCAT
TGGAGAAGAT GCCCAGACGA GCTGTGGCGG AGAGGAGCAT TTGGGAATTT TGGAAAAGAG
GTGGAAGAAT GGAGGATAAG GTAGGGGCTT TGGGTGTGAT CCCAAGAAAT TTGAGGACGA
TGTATGTCCA TGCGTACCAG AGTTACGTTT GGAACCTTAT CGTTTCTGAA CGTATCAAGA
TGTCTGCTAC GGAACCTCTT GTTGGCGATC TTGTTATCGA AAAGTCGGAT GATGACGAGC
CTGTCGGTAG GTCATCACAT CTATTGTCTT TCACCCTTTA ACTGTTTTAC TCATTCTGCC
CTATGCAGAT CCTGAAAACG TTCCTGCTCA CCGCAAAGAC CGACACGGCC GCACCAAATC
CTGGAAAACA TCATCTTCCC CCACCGTCCG TCGCCTCACC GCCGAGGACA TTACCAACAA
GACTCACACT ATCTTCGACG TCGTGATGCC CCTTCCTGGA TTCGACGTCG ATTACCCCGG
TGGTGAGGTT GGCGAGCTGT ACGACAGCAT CCTCAAAGCC GACGGTCTTG ACAAGGACCG
TATGCGACGC GAGCAACGAG AGTACTCTCT TCCTGGCTCA TACCGCCTTA TCCTCCTCCG
CCCGCTCTCA CTTACATGGA CGCATCTTCA GTACACCGAC CCAGATTTGC CGCTTGTCCA
GTCGGATGAA GATGAGATCC TCAGCCTTAA CCCGCCGGCG GCGAATGATC CGGAAGGCAA
GTTTAGGGCA GTCAAGGTGG ATATGCAGCT GGGGGCTAGT ACATATGCGA CGATGGTGCT
TAGGGAGATT ACAAGGGAGG AGACGAGCTC GTGGTTTCAA AGAGGAAGGA CGATGAAGGG
AGAGGACCAA GAGTTCAAGG GAATTAAGAA GGATGATGAG GGGCAAGGGG GAGAAGAGGG
GGAAGGTGGT GAAATGGAGC TTATGAACGA GTAG
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| Protein sequence | MSAQENTQKR PAEDTEKQDV EAKRFKAEEI APSNTPSLTD HLNAPHRTIP NPVSKMGLVP
AIPDLPPSLK MVTGIEADMV ARRGFVGEEE CGIRGFVGKG KGVRGVIKQR FTDFLVNEIG
LDGKVLHLKD ITKPQEPGSN EKDKEAATVT EEEIANGQTK STTEVASQSE EPEVAVDLPE
NLRFAAHPQW STSTTLKLRP HFSDETIISL HQLVEQGKDA PPKGDSGWGG RKKDTESASE
ENAEREEEKK EEGEEAAFND SASKGRGQGR DRGRGRGKER GRGRGGRGGR GGGRNADSGS
WWLTYEDERE PVISKEERAA AHKILREVFP GMFESSTREV KGEEGQRLVI KWSSGAGQSS
FHGKGARRAP DAPRLPAYIH FTLHKSNRET MDALSHLQRL LNVQAKDLTV CGTKDKRAVT
VQRVCLKRSG RNLQTVWRAL NGVKQGWRTE QQAVEERGDR GVRVGDFEYS DKYLELGMLK
GNRFLITLRN VEAESVEEID RTMESVRDLG FINFYGMQRF GTSSMPTHVT GLFILRSNWS
AALDSLLFLR EGEHPDCVAA RLAWLEDGDY VKALEKMPRR AVAERSIWEF WKRGGRMEDK
VGALGVIPRN LRTMYVHAYQ SYVWNLIVSE RIKMSATEPL VGDLVIEKSD DDEPVDPENV
PAHRKDRHGR TKSWKTSSSP TVRRLTAEDI TNKTHTIFDV VMPLPGFDVD YPGGEVGELY
DSILKADGLD KDRMRREQRE YSLPGSYRLI LLRPLSLTWT HLQYTDPDLP LVQSDEDEIL
SLNPPAANDP EGKFRAVKVD MQLGASTYAT MVLREITREE TSSWFQRGRT MKGEDQEFKG
IKKDDEGQGG EEGEGGEMEL MNE
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