Gene CNH03580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH03580 
Symbol 
ID3259269 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp75504 
End bp77916 
Gene Length2413 bp 
Protein Length632 aa 
Translation table 
GC content50% 
IMG OID638258125 
Productexpressed protein 
Protein accessionXP_572577 
Protein GI58270842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.677066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA CCCCGCCTGT CCCACTCCCC GAGGGGAAGA GGACCTCCTC TCCACCGCAT 
AATGCGCCCA CCACAAAGCG TGCGAAGAGA GGGCCACAAG GCGGTGGGAT GGGAGGACAT
GTTACCGAAT CTGACCTTGT CGTAAGTTCT CCCGTCTTTC TACCCCTATC CCAGTTATCC
TCGGCTTCAC AACATGCATG TTGGCTCGAT CTCACCAAAG GTACCATTTT CCCTCACGGG
GGGAAAGTAG AAAATCGTAC ACGAAACAGT TCGCATTCTG TGCGGTATGC CAGCTCCGAA
TTACCAAGGA AACCTCGCTC CCGATAAGTG GCCGACACCT GATCCTGTCA ACGCGAAAGA
TGGGAGGATG AAGGACGAGC AAGGGAAGGA TGTTTGGAGA CCCGATTGGG GAAAGTTGGG
GGCTTTGTCG TGAGTCATTT GTCTATCTGT CCATCTGTCC ATCCAGCATC TGTCATTCTA
CCATGTTTAT ATAAAAGTTT AAAGGCTGAC AGTCATGTGC GAAATCAGGA CAATGAACTT
TGTAGTACAT GCTACTATTG CATGCCGGAA TCATCCAATG TATCATGAGA GCATTACCGA
TTCCATCTTG ACGGACAGAG TAAAAAAGTA TATCCAGTCA ATCCATAAAG GAAGAAAAAA
GACTCCCAAG AGAAAAGAAG CCAAGAACGA TAGACGCGCT ATAAGGGAAA GACAAAGAAG
GGTGGGTCTC ATCTCTTATC CATCATCTTT TTTTTTTTTG CTTTTTAGTG GTATAGCTGA
AAAGAAAAAC CAAAACTCAG CTGCAAGATT TTATAGTCAA GAATTTTGAC GATACACCCC
TCGGGCATTG TCGAGAACGT AGCCTATTGC GCGAAGCGTT CAAGCCGAAT GGTATCCTTG
CTACATTACG GATCGTCCAT CATTCGCAAG TACTCCAACA TGGGTTGAGG ACGGTCAGCC
ATTCCAAAGC TAGTGTGCGT GTTAAGAGGA GGGACGTGGT TAACGGAGGG GGCGGTAATG
GTGTGGTTGA TGAGACGGGT ATGAGTGTGC GTGAAGGTGT GGGCGATGTC GATGAAGACC
AGTATGATGG TGAAGACGCC GAGGCTGAAG ATGAAGAGAG TCAAGGCGCC AATACGCTGG
CCAGCGCAAT GGAACAAGCG ATGGGAGAGT GTGGCCAGAT ACCACCATTT GATGAGTTTC
AGATATACAC TGATGCATGG TGGGGTGAGG CTGCTACACC GTTTTATGTC TCTCTCGACG
TATGGTGGTG GTCTGAACTT GTACGTTTTC CTCTCTCATA TCCCCATCTC CAAAAAGTGA
CATGTTAAAC GCTGACATTA CATACTCTAT AGATGCGGTG GGCTGTATGG ACAGCGTACG
AATGTTATCG CCTCTCCCCC ATCTCATCCG AACGCCCACC ACCTGCCCAT CTCCCTATCG
AGAAAATCGA TCTTTCCTCT AGCTTTCGTT TCACTAACTC ACCGCCCCGC ACCCGCTCTG
GTCCCGGTTG GCCATCCATC TGGGCTTGCC CAGGCATGAT CGACTACCCC ACCGTCCAAA
GTATCAACCC CAACTCCATC CCTCCTCCCA CGTCTCTCCC TCCCAACCCT CTTCCTTCCC
CTTCCGACCT CCTCCTCCCT CCACTGAAAG ACTTGCTGAG AAAACCACAG CATAGCAAAT
TGTATACCTC TGTAACGAAA CATTTGGAAC ATCCGAGGTT GTTATCTGAT GATCAGCTGG
CGGAACTTTG GGTGTTGAGG CAGAATATGA GGACAAGGAG GGAGTATGAG TTTGCGTTGG
GGAGCTTGAC AGGGGATGGG AAGAGGAGGT CTATAGTAGG GGAAGGGGGG TTGTTGCGAG
GATTAGGATT GGGACCAGGA TTAGGATCGC CGGGAGATGG AGAGAGAGCA GAGGGGGTAA
TTGGTATCGA AAGCGTTGAG GGGAATGTAG ATGGAGAGGT TCGAGACGGA GAAGAAGGGA
ACGCCATCAA CCCCGAGCAT GCACCTCCCC AATCTCTTTC AAACTCTCTA TTGCCCACAA
GGTCGACTCA ACCTCGCGAC GTACCACTTG CACGTCAAGC TCAGGGCCCT CAGGCAGTTA
TACACTCCGT AAACCCTACA ACAGCAGAAC AGCCTGAACA ACCTAAACAG CTAGAGTCAG
AACTGGGGCC TGAACCCGAA CTTGGGCCGG AGCAAACTCA GCTTATCGGC TTGGAAGCCC
TCGGAGAAGT GGTAGGCAAT GCGATACACG CGGCGGCGTT GGCAGAGCTG AAAAAAAAAG
GAAATAGTGA CGATGAAGTC GATGAGGAAA TCGAAATGCT TGAGGGTTAC GAGGATATCA
GTTTTTAACT ATTTTTATTT TTTTTGCGTG GACCATTTTG GCATAAGATG AGATGTGGAC
AATTGTTGTA AGA
 
Protein sequence
MSETPPVPLP EGKRTSSPPH NAPTTKRAKR GPQGGGMGGH VTESDLVKIV HETVRILCGM 
PAPNYQGNLA PDKWPTPDPV NAKDGRMKDE QGKDVWRPDW GKLGALSVKK YIQSIHKGRK
KTPKRKEAKN DRRAIRERQR RLQDFIVKNF DDTPLGHCRE RSLLREAFKP NGILATLRIV
HHSQVLQHGL RTVSHSKASV RVKRRDVVNG GGGNGVVDET GMSVREGVGD VDEDQYDGED
AEAEDEESQG ANTLASAMEQ AMGECGQIPP FDEFQIYTDA WWGEAATPFY VSLDVWWWSE
LMRWAVWTAY ECYRLSPISS ERPPPAHLPI EKIDLSSSFR FTNSPPRTRS GPGWPSIWAC
PGMIDYPTVQ SINPNSIPPP TSLPPNPLPS PSDLLLPPLK DLLRKPQHSK LYTSVTKHLE
HPRLLSDDQL AELWVLRQNM RTRREYEFAL GSLTGDGKRR SIVGEGGLLR GLGLGPGLGS
PGDGERAEGV IGIESVEGNV DGEVRDGEEG NAINPEHAPP QSLSNSLLPT RSTQPRDVPL
ARQAQGPQAV IHSVNPTTAE QPEQPKQLES ELGPEPELGP EQTQLIGLEA LGEVVGNAIH
AAALAELKKK GNSDDEVDEE IEMLEGYEDI SF