Gene CNH03550 details

Gene Information

• Locus tag: CNH03550
• ID: 3259137
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: -
• Start bp: 83359
• End bp: 89046
• Gene Length: 5688 bp
• Protein Length: 1602 aa
• GC content: 52%
• IMG OID: 638258128
• Product: hypothetical protein
• Protein accession: XP_572519
• Protein GI: 58270726

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.122713
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAGATCCACA ACACGTAACA CATTCTGTGC CAGCTAAGAT CCAGACAGGA CATAACCATG 
TTCCCAGTCC CATCACATCT CCACCGGTCA GGAGGGGAAC ATATTTCCTC TGAGGCAGAG 
GCAGAAGTCA GTGTTCAAGG CAACCAACCT TCCGTGGAGG CACAGTGCGA ACAGGCGCAA 
TCAAAAGTGC TAGATCTGCT CGAACCCCTT CTTCGGCCGC CTTTAGATAG TAGCGACAAA 
CGTAATAATG AGCGCAAAAG GAAAGTGTCC AGATGGAATG TTGATGAGAT CAAAAAAGTG 
AAGGAAAACC TCGAAAATGC AATTGAAGAG AACAAAGTAC GTCCCTCACT GTCTTGTCCA 
AATCAAGGTC AACAGGAACT AATCTACTCT GACGGTGATG GTAGACGAAA ACCCATGAAA 
TCCTGATGAA CAATCTTCCG TCCATATCAA GCCATATCCA AATCTCCTCC AACCTCTGTT 
CAGACTTTGC GGAACTCAAA ATCAAACTCA AAGCGCTGGA GAGTCAAGTC GATGTCTCGG 
ACCCAGCGAC ATCATTCATG CCGCCCTTAC TTTCCCTCTT GAACAAGCAT TTCAACTCCA 
TATCCGCTCG CGATACTTCG CAAGGACATA TAGCAGCCCT GAAAGCTTTG AAAGCCAAGG 
TGGAAAAGGT GAAAAAGTTG GAGGAAGTTG TGTGGGCGGG ACAAGGCGTG GAGGACTGGG 
TAGTGGACTC TGCTCCTTTG GCAAAGAAAG AGACTGGGGC AGAAGCAAAT GAAATAGCAG 
TGGATGGGCT GGAAGCTACC GCTATTTGCA AGGCGTTGGA AGAGAAGGAG AGTGTTTTGA 
GGACATTACT GAGGGATCAG TTGGTAGATG GGTTCAAGCG GGCTGTGGTG GTGCAAAAGG 
ATGGGATGAA ATTGGATGTC AGGCAGGAAA TCAGGTTGAG CAGCCCCAAT GGTGAGTCTG 
CTATGAAGCT CAGTATGTCT CTTAGCAACT AACCGACCTG GTCAATCAAG CATCGCGCCC 
GGATTACCTT CAGACCACAA CTGCTTCACC ATATCCTCTT TCATCGCTCT ACAAAGCCCT 
ATCGTCCCTC TCGCTGTTAC CAAATCTTCT CCAAGCGCTT CAAACGCAAT TATTAACAAC 
AATTATCCTA CCCGTCGTAT CCTCTCAACG CCGAATAAGC ATCTCTTCAT CTTCCGGAAT 
TTTCTCTCTT AAATCAGACC AAGTCAGCGG AGACATGGAG GACCAAGAGG TTTTGACTGG 
CTTAAAGCAA GTTTTGGACT TTACCTCTCG TACCCTGTAC CCCGAAGAAG CCAACACTCC 
AGAGCGCGAA CCCTTCATCC GCGAGATCAC GGTCAAAACC CTCGAATCCC TCCTTGATCA 
CCTCATCATC CCCTCCATTC CATCTTCCCC TTCGTCTATC CCCGGATGGC TCAATCTAAT 
TGTTTCATCC GTCGCTATCG AGGATACTGT TCTTCCCGTC TCGTCAGCTA ATGATCAGCT 
CCATCACAGT CGGCCGTTGA AGACGTTCTG GGAGAAACAG GCAGGGAAGG AGTATGCGAA 
TAAGAGACGA TATGATACGG CCGACCTTGT GAGGGTGCTT GTGTTAAACG AGTGGGGAAG 
ATGGGAAGGG ACGGAGAAGA AGAGAGAGAG AGAGGTCAGT GTGGTAGTTG AGGTGGAGGT 
CAGTAGTGAT GATGAGGATC AGCCCGTGAA GGAGCAAAGC AAAGAGCAAG GTGAAGCGGG 
AGAGGCGCAG GGCGACGGCT GGGGATTCGG AGAGACCAGT GAAAATCAAA TTGAGCAGGC 
GGGGGTGAAG CAAGTAAACC GGGAAGATGC GGAAGAAGCC GAAGACGGGT GGGGATTCGA 
TGAGGAGTCT ATCCCACCCG CGTCCTCGGC TGATCAAGCC CCACAAGAAG AAGACGAAGC 
CGATGGATGG GACCTAGACG TCGCCGCCAG TACGAGTTCG TCGCTGCCTG AGTCTAGCCC 
TTCTCTTCCC CAGCTTGATC CCTCGGTAGA GCTCGAAGCT AGGACTGAAC ACGCACCTGA 
ACCTCAACCT CAACCTGTAT CTCAACACGA ACCTCAACAC GAACCTCAAC GAGAGTCTGA 
GCCACAGCCA GAACCTAAAC CTGTATCAGC ACCTGCACCA ACATCGGCAC CTACTAAACC 
TCTTCGAGAA GCAAAACGTT TGGGCAAGAA AGTGGCCAAA AAGAGCAAAA CAGAGGAATA 
CGATCCCTGG GATCAACCGT TTGATAACGA AAACTCCCTC TCAGCGTCCA CTTCTACATT 
CACGTCAGCG TCGACTTCGA GTCTGTCGAA CCCAACACGG GCACTGTCAG CGGAAACTCC 
TTCCAATAAC GATATACCAC CTATTAAAAA ACCCCCTAAG GAAGCCAAGA AGTTGGGGAA 
GAAGGTGGGG AAGAAGACGA ATAAGGAAGC GGAGAGAGAT TTTTGGGATA CAGATATTCC 
GGTAGAGGAT TTAGGTGGTG GAGAAAGCAG TGTTCACCAT ACAGCTGGTG TTCTGGGCGA 
TAAAGTGGAA GGTGGCGGCG GTGGTAATGG TGATGGACGG AGCCGGGACG ATGATCCCAC 
GTCCACCTCT CCACAGATGA CGGCACCCCC CCAAAAAAGG AGGACTGAGC TTCGTGAAGA 
GAAAAGGGTT ATTGAGGAGA AATACTTTGT ATCCACTGCA TGCGAAAAGT TGTTGGATAT 
TGGAAGAGGT CTGCTCAAGG AGGTGGAGGA GTTACAATCT TCTAGGTAAG AACAGGCTTC 
AGGCGCGAAA AAAGTGATTT TTTTTGGATA TTAACGGTGG ATCGCAGTTT TGCCTCACCT 
TCCTTTACTT TTGATTCTAC AAGCCCAATC ATCATCCAGT CTTTGACAGA CATCTTCTCC 
CTTTATAGAG CCCTTCTTCC CATTCGGTAC GCTCAACAGC TGCAAGACAT CCCGGGTATC 
ACTATGCAAG CGTACGACGA TGGCAACTAC CTTGCTTCGC AACTTGGTTC ATTCGCTCTT 
CCCGCTTCAT CAACGCTTTC GTTGGACGAT GAGATTGCTC GCCTGAGAGC ATTGTCTGAG 
CGTATCTATG AGGATTTCCT AAAAAATCAG AGGGAGGGCA TAGACGAGGA GCTGGATAGC 
CTTAAAGGCG TGGAAGGAAC AGCGGATTAT AGTATCTGAT ATATCAATAT AGCTTGGCCA 
TGCATTGTAC CGAGCGAGTA CGCGACGCGT TTTCTTGTGT GAGGTGGAGA AAGATGAATC 
TGACGCGACG CGTTTTGGTG CACAGACCAC TTGCTCATTT CTTCCCACAA ATCTCTCTTT 
CCTTTATATT TCTTGCTTAT ATTTCACATC CCGCCATGCA GCACAGGACC CCCCTCACGC 
CCATCCCGCA GAACCGCTCC CCCCCCTCCG CCACATCCTC CAATGCCCCC AGCACTCCGA 
CTCCCAAGCG CCCCTCGTCC GCCAAACGGC CCCCGAAACT TGCACCCATC TTCTTGGCCA 
AGCGGGCCAG GCCGGAAAGG GAACGTCAAG AGAACACCGC ATGGGGTGTG TCTGCAAAGA 
AACGCGTGCA CCTGGCTGGG CCGTCGTCCA TCCCCCCGCT GGCCGCTGGC TCACGCTCCG 
CACCCATAGC GTCGGACGGG GAAGACGCTT CGCAGAGCAG CGATGACCAG TCGGATTCCG 
AGGATGACCG CCGGCTATAC ACACAGCGCA AATCGCAGAG TATACATGAC TACTTCCTGC 
CCAGTACCTC TCGATACGGA CGCGTCAAGG ACGAACGGCA GGACAAGGAG AACACACGCG 
TCATTGAGCC AATCACCAAG GAAGAATGCG TTTGGAAACG AAAGAGAAGA AGACTCGGAG 
TCAAGGGACA GGGGTCTTCT CTTGCAAACC AGCGTCGTAA GCTTTTGGCT TGCCCTGTTC 
AACGGCCAAC GCGCTGACAG AGCACATAGT GATACCCCCG CCCCAAGCAT ACCTGTCCAC 
ACTTTTACAT TCTCTCCTAC CTTACCATCC CCTCAGGCCT CCCGCTTCCA TCCTGTTACC 
CTCAATCCAT CCACCCACCG GCCGTCCTCG AGACTTTGCT CCTCCTCTCG CCGTCTCGTT 
CAACCATATC GCAAAGCAAT ACACTAGTTC CGACGCGCGT AGTCAAGGAT TACGCCGGTT 
GATCGGTATC GCGGGAGAAG AAGGCGGGGT GAGGATTTTA GATGTAGATG AGGGACTGGG 
GATGCATAGG GAAGAGAAGG GATGGTGGTG GAGAGCGCAT GGGAATGCGA TATTTGATTT 
AAAATGGTCC CCGGACGATA CGAAAGTGGC AAGTCGTCTT TCCTTCAAAG TCCCGAGTAG 
ATTTAACTGA AAATGTTACC ACAGCTCACT GCATCGGGCG ACCAGACATC ACGCTTACAT 
GCTCTGACCA CCCCCGTCCC CACTCTCCTC GCCACACTCC GTGGTCACAC ATCATCTGTC 
AAGACCGTTA CCTTTCTCGA CCCTTCTCGC TCCGCCAACA ACCCTTCACA GTCATCGGTT 
ATTGCTTCGG GCGGAAGGGA TGGGAACATT CTGATTTATG ATGTTCGAAC AAAAGGGCGT 
GATCCCGAAC TGGGCGAGTA TGACGCCGGG CCAGCGAGGA GGGAAGGCTC AAGAGAGAGG 
TACAGGGATG GTATACCGGG ATTTGCACCG CAAACGAGTG GCGAGGTGCT GGATCCGGTG 
ATAGTCATCA AGGGAGCTCA CGGGGACGGT AAACGCTCAG GTGTAAGTTA ATCCCCCACC 
TTGCATACTA TGAACACTTT AACATCCAAC CTCTTTCATA GCGAACTGCC ACACGATCCG 
TAACCTCCCT CCTCGCCCTC TCCTCCATCC CTGGCACCCT AGCCTCTGGC GGCTCATTTG 
ACGGTATCAT CAAATTATGG GACCTCCGTT TCCCTGCCCC AACCAACCGC TCTTCCAACC 
CACGTCCGAC GTGTACGCCA TCTGGCAGTT TACCTGATGC CACGCTGAGC GGCGAATCGC 
CCGCAAAACG AGCAAGAAGT ATAAACGCAA TGGTGGAATC ACCGGTGAAT GGGGATGTTT 
ATGCGCTTTG CGGTGATTCC AAGGTCCATG TTTTACGTCC TTCTGCCGCC CTCATTCAGC 
ACCACCCGAC CCACTCCTCT GGAGCGTTTA ATGCGTTTAC AGAAGAAGAG ACATACGCCG 
AAGCCGTCCA ACCGGCCACT TACTCGGACC CATCCATGCT CATTTCCAAT TTTTACATCC 
GTCTTTCTCT CTCGCCTGAT GGCCGGTATC TGGCTGCTGG GAGCTGTAAA GGCGGGCTGA 
TGACTTGGGA TACGCAGGAA CGAGGCCAGG ACATGAACAG AAGGAGAGAT GCGTCGACGA 
CGGTGGCGAA GAAGCTTGGG ATGGGGTTCG AGGTAGGAAT GAGTGAAATA GGGGGAAAGG 
ATAGAGAGGT TTGTGCGGTA GAGTGGGGGA AGGATATCGT GAGTCTGCTC TTCGTCTCTC 
ACCTTTCCTT TCGGTCTCCC GCATTGCTGC GCTGCTCTTC TATTATTCCA CTTTATTATA 
TACGGAGAGC TGACAACTTG TTTTATTATT ATTATTAATT TAAATCTCTA GCTCGCGGCA 
ACTTCAGATG GGTCCTTGAC ACGGATATGG AGGTCCGAAC CAGAGATTGC AAAGCAAATA 
GCAGAGAACC CTGGTGCCTA CGCCAATGAG TGGGCGGGTG CAATTTGA 

 

Protein sequence

MFPVPSHLHR SGGEHISSEA EAEVSVQGNQ PSVEAQCEQA QSKVLDLLEP LLRPPLDSSD 
KRNNERKRKV SRWNVDEIKK VKENLENAIE ENKTKTHEIL MNNLPSISSH IQISSNLCSD 
FAELKIKLKA LESQVDVSDP ATSFMPPLLS LLNKHFNSIS ARDTSQGHIA ALKALKAKVE 
KVKKLEEVVW AGQGVEDWVV DSAPLAKKET GAEANEIAVD GLEATAICKA LEEKESVLRT 
LLRDQLVDGF KRAVVVQKDG MKLDVRQEIR LSSPNASRPD YLQTTTASPY PLSSLYKALS 
SLSLLPNLLQ ALQTQLLTTI ILPVVSSQRR ISISSSSGIF SLKSDQVSGD MEDQEVLTGL 
KQVLDFTSRT LYPEEANTPE REPFIREITV KTLESLLDHL IIPSIPSSPS SIPGWLNLIV 
SSVAIEDTVL PVSSANDQLH HSRPLKTFWE KQAGKEYANK RRYDTADLVR VLVLNEWGRW 
EGTEKKRERE VSVVVEVEVS SDDEDQPVKE QSKEQGEAGE AQGDGWGFGE TSENQIEQAG 
VKQVNREDAE EAEDGWGFDE ESIPPASSAD QAPQEEDEAD GWDLDVAAST SSSLPESSPS 
LPQLDPSVEL EARTEHAPEP QPQPVSQHEP QHEPQRESEP QPEPKPVSAP APTSAPTKPL 
REAKRLGKKV AKKSKTEEYD PWDQPFDNEN SLSASTSTFT SASTSSLSNP TRALSAETPS 
NNDIPPIKKP PKEAKKLGKK VGKKTNKEAE RDFWDTDIPV EDLGGGESSV HHTAGVLGDK 
VEGGGGGNGD GRSRDDDPTS TSPQMTAPPQ KRRTELREEK RVIEEKYFVS TACEKLLDIG 
RGLLKEVEEL QSSSFASPSF TFDSTSPIII QSLTDIFSLY RALLPIRYAQ QLQDIPGITM 
QAYDDGNYLA SQLGSFALPA SSTLSLDDEI ARLRALPLAH FFPQISLSFI FLAYISHPAM 
QHRTPLTPIP QNRSPPSATS SNAPSTPTPK RPSSAKRPPK LAPIFLAKRA RPERERQENT 
AWGVSAKKRV HLAGPSSIPP LAAGSRSAPI ASDGEDASQS SDDQSDSEDD RRLYTQRKSQ 
SIHDYFLPST SRYGRVKDER QDKENTRVIE PITKEECVWK RKRRRLGVKG QGSSLANQRL 
IPPPQAYLST LLHSLLPYHP LRPPASILLP SIHPPTGRPR DFAPPLAVSF NHIAKQYTSS 
DARSQGLRRL IGIAGEEGGL TASGDQTSRL HALTTPVPTL LATLRGHTSS VKTVTFLDPS 
RSANNPSQSS VIASGGRDGN ILIYDVRTKG RDPELGEYDA GPARREGSRE RYRDGIPGFA 
PQTSGEVLDP VIVIKGAHGD GKRSGRTATR SVTSLLALSS IPGTLASGGS FDGIIKLWDL 
RFPAPTNRSS NPRPTCTPSG SLPDATLSGE SPAKRARSIN AMVESPVNGD VYALCGDSKV 
HVLRPSAALI QHHPTHSSGA FNAFTEEETY AEAVQPATYS DPSMLISNFY IRLSLSPDGR 
YLAAGSCKGG LMTWDTQERG QDMNRRRDAS TTVAKKLGMG FEVGMSEIGG KDREVCAVEW 
GKDILAATSD GSLTRIWRSE PEIAKQIAEN PGAYANEWAG AI