| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH03520 |
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| Symbol | |
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| ID | 3259195 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | + |
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| Start bp | 93459 |
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| End bp | 96162 |
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| Gene Length | 2704 bp |
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| Protein Length | 621 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638258131 |
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| Product | histone deacetylase 1 (hd1), putative |
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| Protein accession | XP_572517 |
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| Protein GI | 58270722 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGTCTACAAT TGACTCGTCT ATAGAGGAGC TAAATAGACA TCCGGAGCCT CCAATAACAG
CGCACTACTC CTCCTGCACT TTCAAGTAGA TCTCCGCGAT ACACAAGCAA TTACCTCCCA
CCTCCACCTA CAGCCACAAT GCTGTCCGCC CAGCCACCGA TAGACCCATC CCCACCTCCA
TCTTCCTCCT CCTCTCGCAG GGTAGCATAC TATTACGATC AGGATGTGGG AAACTACAAC
TACTATCTGG GTCATCCCAT GAAGCCCCAC CGAATAAGGA TGGCGCACAA TTTGATTGTC
AACTACGGGA TGTGTGATGA GGAAGGGCAG GAGCATGGCC CCGCAGAAGT ATGGGGCGAA
GGAAAGAGGG CAGTGAATGA TGAGATTGCC CAAAATTGGG GGGGAGGCGA GATGGGCGAT
GCAGAAGTGA AGTGGGAAAA GGCGGCGCTT AGGGGATCAA GGAGTAAGAC GATGCAGGTT
TTTGTAAGTG TTGCTCGCCT TCTTTGGAGA AGTATGACCA ACCAAATTTT TGTAGAAACC
TCGAAGGGCT ACCAAAGAAG AAATGACTCG GTTTCATACA GATGAATATA TAGACCTGCT
AGAGGCAGTT ACCCCGGAGA CTGCGGATGC TTTAACAGGG GGCGGAACGA GGTGTAAGTC
TCTCCTGCAG CATTTTCCCG TACATTTCAG ACCATTGACA TGCCATCTAG GCCTTATTGG
TGAGGACTGT CCCGCATTCG ACGGTTTATT CGAGTTCTGC ACCATCTCTG CAGGTGGATC
GTTAGGTACG ATTTTGCCCC TTCTGTACTA GATTTGAGCA CTTATCCGAT TGCAATAGGT
GCTGCTGAAC GTCTGAACGC CGGTGCTGCC GACATTGTCA TCAATTGGGC TGGTGGTCTG
CATCACGCCA AGAAGACTGA AGCAAGTGGT TTCTGCTACG TGAATGACAT GTATGTTCCT
GCCCTTTTCT TAAGGTTTCT TAGCTTACAT GTTTGCAGTG TGTTGGGTAT TCTTGAGCTT
CTCAGAATAC ATCCCCGAGT TCTCTACATT GATGTTGACG TACATCACGG AGACGGTGTA
GAGGAAGCGT TCTACGTAAC GGACAGGGTC ATGACTTGTA GTTTCCACCG ATTTGGAGAA
TTCTTTCCTG GTACAGGTGA TGTCAGAGTG AGTTCTTTGT TAGGTGTATA AAGATCTTTT
GCTGATAAAA TCGACAGGAT GTTGGTATGA AGAAAGGAAA AGGCTACGCC GTGAACGTCC
CACTCCGAGA CGGTATCACC GATGACAGTT TCCAATCAAT ATTCAAGCCT GTGAGTATCC
CATCGCGACT CTTTCTAACA GAAGCTGATG TTAAATCAGG TGATTGACCG TATCATGTCA
CACTTCCGAC CCAGCGCTGT CGTCCTTCAA ATGGGTGCCG ATTCTATATC AGGCGACAAA
CTCGGTGGCT TCAACCTAAC TTTGGAAGGT AGGTTTTCTT TTGCATGTGC TGCCCGAGAA
ATAAGAATAA ATAGCTCATG TTCTCCTTCT GAAATAGGTC ATGCGGAGTG TGCCAGATTT
ATCAAGAGTT TCAATGTACC TGTTATGATG GTTGGTGGGG GTGGATATAC TGTGTAAGTC
CAGCTGATAC TCTGTGCAGA GTTACGATAG CTGATGAATG ATATAGTAAA AACGTTGCAA
GGGCTTGGAC TAAGGAGACT GCCATTATGT GCGGTGTGGA CCTTGCTGAG GACTTGCCTT
ACAATCAATT GTGCGTCTTA CATTCATCTC TTGTGATGAG GAAAATGTTA ACAGATAAAA
TAGCTTGGAA TATTACGGAC CTCGATACAA GCTTGAAGTT TTGCCCACCA ATGCCGTAGA
CCATAATCCC CCCGAATACC TGGAGCGTAT CAAGTAAGCT TCCGGTTCCT TCTGGTATGA
GCAGCAGCTA ACATTTTGTG AATCAGGAAT CAAGTGTTTG AGAACCTCCG AAGTCTTCCA
TTTGCTCCTT CTGCTCAAAT GCGTTCTGTC CCAAGTAAGA CTATTGGCCA GGTTTTGGGT
ATAACGGATG GCGGTGACGA GGAACCCGAA GATGAGATTG ATCAGCGTAT AAAGAGTGAG
CCAACCATCC CGCCCGAAAC CACATCTTCA TCAGAAAACT CATGAAGATC TCCGTTTTTA
TAGAACTGTT GAAACGGCGC CGAGCCAATG TCCTAGATGT CGACGCCTCT TCATCTTCCG
AATCCGAAAC CGACACCCCA GCCTTCTCCC GTCCCGGACG AGCCAGACGT CAAGGTGGCA
ATTTTTCCGG CCGTGGTCGC TCATCCCGTC TCGCCCAACT GCAACGTAAC CGCGAAAGAA
GGGAAGCAGC GCAGGAAGCG TCCAATGAAG TGGAAGATGA TCCTTGTGGG GTGTTGGGGA
AGAAGAAGAG GAGTTTCTTC AAGGTGGTTC CCAAGTTGAA TGGTGTGGGA GTTGAGCCGA
TAGACGCGAC GGGTTTCGGA ATCGGTGTGG TGACCAATGG ACTCAATGGT GTAGGAGGAT
TGAAGGATCG GTTGGGGATA CCGGTGGTAG AGCAGTGGAA AGGGGACGGG ATCGTGTCGA
GGGGTGGTAC GCCAGCGAGT ATAGCGTGAA AAGGCATGTG CCTCATATCA AAATGAGGGA
TGTTGCAATC TTTTTTTGGT TTCAGTTTTG CGTTCATACT TCATGGTCAG TATGCATTAT
TAGT
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| Protein sequence | MLSAQPPIDP SPPPSSSSSR RVAYYYDQDV GNYNYYLGHP MKPHRIRMAH NLIVNYGMCD
EEGQEHGPAE VWGEGKRAVN DEIAQNWGGG EMGDAEVKWE KAALRGSRSK TMQVFKPRRA
TKEEMTRFHT DEYIDLLEAV TPETADALTG GGTRCLIGED CPAFDGLFEF CTISAGGSLG
AAERLNAGAA DIVINWAGGL HHAKKTEASG FCYVNDIVLG ILELLRIHPR VLYIDVDVHH
GDGVEEAFYV TDRVMTCSFH RFGEFFPGTG DVRDVGMKKG KGYAVNVPLR DGITDDSFQS
IFKPVIDRIM SHFRPSAVVL QMGADSISGD KLGGFNLTLE GHAECARFIK SFNVPVMMVG
GGGYTVKNVA RAWTKETAIM CGVDLAEDLP YNQFLEYYGP RYKLEVLPTN AVDHNPPEYL
ERIKNQVFEN LRSLPFAPSA QMRSVPSKTI GQVLGITDGG DEEPEDEIDQ RIKKLLKRRR
ANVLDVDASS SSESETDTPA FSRPGRARRQ GGNFSGRGRS SRLAQLQRNR ERREAAQEAS
NEVEDDPCGV LGKKKRSFFK VVPKLNGVGV EPIDATGFGI GVVTNGLNGV GGLKDRLGIP
VVEQWKGDGI VSRGGTPASI A
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