| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH03480 |
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| Symbol | |
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| ID | 3259086 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | - |
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| Start bp | 103670 |
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| End bp | 106972 |
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| Gene Length | 3303 bp |
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| Protein Length | 928 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638258135 |
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| Product | ubiquitin-protein ligase, putative |
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| Protein accession | XP_572576 |
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| Protein GI | 58270840 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.918815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GAAGACTTGG AGAGCGGGAA ATACCCTGCA ATCTAGACTT GCAATCACTA CCTATTCATC
TTTCCGCCGG CGGTCCGCAC TCATTCGCCG CCGTACGATA TATAGACAAT TGTCTCCCAT
TCATTTCCTC TATCAACGAC CTCAACATGC CCGTACGACC GTCAAGGAGC AACTCGGATT
CTTCTATACC CTATGTGACA AACTCATCCC TGGCCTCGTC CTACCGCCCT ACATCGATCA
GAGAAAGAGA AACATCACCC ATTAATACTT TCAACCAACT CTCTCTTGAA AGATCTCTCA
CTCCACCTAA GGCCCCCCGA CTTGCACCTC AGGTGACCCA CGACCCCAAA TACACGCGTC
ACAAAAGAAC CCAAGTGCTT AGAAATACGA GCGGAACACC GTCCGCGGCG AGCACGGACG
ATGAAGATGA TCAGGATGAG CGTGGAAGGG GTGGTATAGA CGAGGAGGTG AAAAGCTGGT
TGGAGCTACG TGATGGACAG GGATGGAAGA GAATCGGAAA ATACAAGAGT GTCAACAAAA
GGGGTGAAAT CAAGAACGAT CTGACGAATC AACTGCCGCC CGAAATCCTG ATTCAGATAT
TCCGGTACCT ACCTGGAAAC AAGGATCTCC TGTCTGTCCT TTTGGTCTCC CGTTTTTGGT
GTCTTTGTGC CTTTTCATTA TTATGGTACA AACCCACTCT TCCAACAATC ACGCAACTCG
CCTCGATTGT TCGTGTAATT CATTCTCCTA CCCGATCCCT ACCTTACGCC AACGCCATCA
GACGGCTGCC TCTCATCCAA CTAGGTCCGA CTCTCACTGA CGAGCTATTC ACGTCTCTAT
TAGTGTGTTC AAGATTGGAG AGGCTTAATA TCAGTGGTGC CGACAAGCTC ACTTCTGGGG
CTTTGCGAAA TGTCATCGCC TGTATGCCGA ATCTGGTATC CTTGGATTTG ACAGGTGTCA
TCAACACCGA TGATGCCGTC CTGGTGATTG TGGGTGAAAC CTGCCAGAAG CTGCAAGCTA
TCAATCTGTC TGAATGTAGA TTGGTCGGGG ATGAGGGTGT CTTGGCACTG GCGAAGGAAA
GCAGAGCGCT CCGCAGGGTG CGTACTTTCC CCTTGTTATC AGGAAATTGC TGACTCTGGC
AATAGATCAA GTTTGAAAAA TGTCATCGAA TAACACAAAA ATCACTCATC CCTCTTATCC
GCGCGTGCCC CCTTGTTTTG GAATATGACT TTCAAGATGT CATTTCTTTA TCCTCTTCTG
TCCTTCACAC TGTCTTCCTG CACGCCTCTC ATCTCCGCGA AATACGCGTG AATGGCTGCG
TCTCCCTCAA CGAAAATTGT ATACCCAATT TGCTCGATTT GAGCGAAATG CAAGACGACG
GAGTTGCCAA AGTGTCAGAA GACGTGGGGA TCAAAATCGA ACCTGCGGAA GGCGTAACGA
TGTGGCGACC GGTGACGACC ACTTTCGAGT ATTTGAGAGT GGTTGATATG ACTGGGTGTA
CGGATCTGGG TGATAAAGCT GTTGATAACC TAATTACCAA TGCGCCAAAA TTGAGACAGT
TGACGTTGAA CAAATGTCCC GCGTTGACAG ATAAGAGTTT GGAAAGTATT GGAAAGCTGG
GGAAGCATTT ACATAACTTG CATTTGGGAC ATGTCAGCTT GTGAGTATTC AGCATTCAGC
TTGGCGGGCG TGACAGTATA GACAAACTGA TCGAGATACA GGATCACCGA TGATGGGGTT
ATCAACCTAG CGAGATCATG TACCAGACTG CGCTACCTTG ACTTGGCTTG TTGCACTTTG
TTGACCGATG CTTGCGTGGC TGAGATTGGT GAGAACATGC CAAAGCTGAA GAGGTTTGGT
CTGGTCAAGG TATATCTCAA TGAGTAAAGT CAGTGTCTGA AGTGCTGAAC TTTTTTCAAC
AGGTCACCAA TATCACGGAC GAAGCGATAT ATTCTCTTGT CAGAAAGCAT ACTTCGTTGG
AGCGGGTGCA TTTATCGTAC TGCGACCAGC TTAGCGTTAA GGCGATTGCA TACCTTCTCA
ACAAACTTGC TCACATTAAG CACCTGAGTC TTACAGGTGT GAGCTCTTTC AAAGTCCCTG
AACTCCAGGA ATTCTGCCGT CCACCCCCAG ATGTGAGTAT CCTTTAAAGA TATGCTTTCA
TTATCAAGCT CATTTCCACG TTAGTTCTTC AACGATCATC AACGGGCTGC ATTCTGCGTC
TTCTCCGGCT CAAGAGTTGT CGACCTTCGC GATTATCTCA ATAACCACTA TCTCCCCTCA
ATGGAAGTTG ACACCTCTGA AGATTCGGGC CATGACGGTG CGGCTTCCAG TACCTCATCC
CTGACCATCC CCAGGGCTGC ACCCACCCCC GATCATTCAT CAATTTCAAA CAGCGTTGCT
CAACACAGCA ATCTTGTGTA TAGGCAGTCA TTGTCGAATC TGAATGATGT TTGGGAAGAC
GCTCCATCCC CTATCTCTCC CACCCCTATG TCTCGACCTC AACCACCGCA CATTCTCACC
GCATCGATCC AATATCAAAG CGTCCAACCT GGTGAAGGCG CTCCCTTCCC TATCGCGTCG
ACGTCTACCT CACCTCCCAC TTTCACGTCT TCGTCATCTG CTAGGCTCAC TCCCAACCCG
ACATCCGCCG CTCCATCATA TTTCAATATC AGCTCAAGTC CTAGCTTACA TAATCGCTTT
GCCTATGGTG GTACTACCTT GCCTACCCAT TTGGATTACC TCGTACCCCC GTCTCAGGAA
TCTTCTAGAT CGTCCAGCAT GAGCTCGAAC GGGGATAGGT TCCCGTTCAT TCCACATCAA
GTTTTATCTG AGCGCAGCCG AGGCCCAGAT GCGCCGAGTA GACGGGATAG ACCGTCTGGA
CCTAGAGTGC CGTCAGACTC GTATAATGTG TCTCCCTCAT ATGCTAATGA GTTCGCATCA
TATTGGTCGA GGGAGGGCCG GCTACCACCA GCATCAGATG CAGAAGTCGG GATGGCGCGT
ACGCATATTG CTGAAGAACC TATGACTCAA GTCCCGAATT TGTCTCATCG TCCAGGTGCA
AATGGGTCAT CGTCATCGAG CGCGGGCGCT CAAAGGGAAG GAGGAAGGGG CTCAAGATGG
TTACAGCGGT TCGGTAACGG ACGTTGATTG GCTGTCGTAA TCGTGTATGG GAGAGGAGCG
GTTGAAACAT GTGTACAAAA CAAGAGATTT CGGTCATGTT GTTCAGTAAG GTACGATTCA
TACATAGTAG CATAGCAGGA AAATTGTTGG ATAATTATGT TCTATGTAGA GTGATGATTC
TCA
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| Protein sequence | MPVRPSRSNS DSSIPYVTNS SLASSYRPTS IRERETSPIN TFNQLSLERS LTPPKAPRLA
PQVTHDPKYT RHKRTQVLRN TSGTPSAAST DDEDDQDERG RGGIDEEVKS WLELRDGQGW
KRIGKYKSVN KRGEIKNDLT NQLPPEILIQ IFRYLPGNKD LLSVLLVSRF WCLCAFSLLW
YKPTLPTITQ LASIVRVIHS PTRSLPYANA IRRLPLIQLG PTLTDELFTS LLVCSRLERL
NISGADKLTS GALRNVIACM PNLVSLDLTG VINTDDAVLV IVGETCQKLQ AINLSECRLV
GDEGVLALAK ESRALRRIKF EKCHRITQKS LIPLIRACPL VLEYDFQDVI SLSSSVLHTV
FLHASHLREI RVNGCVSLNE NCIPNLLDLS EMQDDGVAKV SEDVGIKIEP AEGVTMWRPV
TTTFEYLRVV DMTGCTDLGD KAVDNLITNA PKLRQLTLNK CPALTDKSLE SIGKLGKHLH
NLHLGHVSLI TDDGVINLAR SCTRLRYLDL ACCTLLTDAC VAEIGENMPK LKRFGLVKVT
NITDEAIYSL VRKHTSLERV HLSYCDQLSV KAIAYLLNKL AHIKHLSLTG VSSFKVPELQ
EFCRPPPDFF NDHQRAAFCV FSGSRVVDLR DYLNNHYLPS MEVDTSEDSG HDGAASSTSS
LTIPRAAPTP DHSSISNSVA QHSNLVYRQS LSNLNDVWED APSPISPTPM SRPQPPHILT
ASIQYQSVQP GEGAPFPIAS TSTSPPTFTS SSSARLTPNP TSAAPSYFNI SSSPSLHNRF
AYGGTTLPTH LDYLVPPSQE SSRSSSMSSN GDRFPFIPHQ VLSERSRGPD APSRRDRPSG
PRVPSDSYNV SPSYANEFAS YWSREGRLPP ASDAEVGMAR THIAEEPMTQ VPNLSHRPGA
NGSSSSSAGA QREGGRGSRW LQRFGNGR
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