Gene CNH03380 details

Gene Information

• Locus tag: CNH03380
• ID: 3259237
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: +
• Start bp: 141783
• End bp: 145371
• Gene Length: 3589 bp
• Protein Length: 930 aa
• GC content: 52%
• IMG OID: 638258146
• Product: glycogenin glucosyltransferase, putative
• Protein accession: XP_572506
• Protein GI: 58270700
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.337452
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCGCCTTTCC CTCGGGCGAA TCCAAAAGCA AAGAGTGTAT CTCATCTACT GAGACCGCTT 
GCAAAGAAAA CGCCTTCCGC ATCCTCAACT CAAACAAGCG GAACTCGGTC TCGGTCTTGT 
TGTTGTTTGT TTCTTCTTTC CAGCGGCGTA GACAAATAAC AGGTGAGTCT CCACTTGAGT 
CACCACATCA TACACAGCTC ACAACCTATC AGTCCAGACA TGTCTCTTCC CAACGCCTTC 
GTCACACTTC TAACGACGTC CTCGTATCTC CCCGGAGCCC TCGTGCTTCT CCATGCCCTC 
CAGGATCTTC ACCCAGCGCC GCGGGACTTT CAGATTGTAG CCCTCGTGAC TCCAGAGACG 
GTCGATGCTG CTACTATCGG CGAACTACGA AGGGCAGGGT ATGATTTGGT GATTGGCGTG 
GAACCTATTG GCAGTGGGAA AGCCGGTCAA GTCGGGTTAG AGCTCATGGG TAAGGTCGTC 
TCCGTTCGGT CTGTGGCCTG CCAAGGAAGA TTGTCCATAA TGCTAACGGA TGCGGCTAAC 
AGGCCGACCG GATTTGAATT TTGCATTAAC AAAGCTTCAT CTCTTCCGCC TCGCCCCGTT 
CTTCTCTACT CTTATCTACC TCGATGCGGA CATCCTCCCC CTCCGACCCA TTTCGCACCT 
GTTCACCTCG ACCGCCCCCC ATGTGTTTTC TGCATGCCCT GATACTGGCT GGCCAGACTG 
TTTCAACTCT GGATTCATGG TCATCCGTCC TAGAGAGAGC GATTGGGATG GGCTTAAAGG 
GATGTTGAAA GATGGTGAAG GGGAAGATGG GCTATATAGA GAAGCAGGGA ATGGGAGCTT 
TGATGGTGCT GACCAAGGGT TGTTGAATGA GTGGTTCAGT GAAGAAGGTG GTGGCGGGGA 
CTGGAACAGA CTGTCCTTCA CGTACGTTCC AGATTTCAGT TTTCCGTCAA TCAAGGATTG 
TTGCTGACAC CATTCTCGAC AGATACAATG TTACCCCCTC TGCGGCGTAT ACCTGGGCCC 
CAGCGTATAA ACGTTTCGGC CACAAGATCA GCAATGTCCA TTTTATTGGA CCTAATAAAC 
CGTGGACGAG CCTACCCGGA AGACCGGCCG GTGTGTCAAA TGTCAAAGGA AAAGAGAACT 
CTTACGACTG TAAGTCATTC CTGCCTGTCC AATGAATTGC CCAACTCATT GACGTCTTCT 
TCTTCTATCT AGACTTGTCT CTTATAGACC GGTGGTTTGC AGTGTACGAC AAACATGTCC 
GCCCAGCTTC CGCTCTCGAC CCCGACATCT CAAGGCGTTT TGCTGTCCCA CAAACCATAG 
CTGCTTGGGA TTCCCATGCG AACCGAGCAA GAGCAGCTGC CACTGTCCTG TCTGAAGACA 
AACTTGAACT GTCCGAGCTC AAAGCTGCCA CTGAAAGGGG CGTGAATGCT TTCAAACCGG 
GACAGTACAC TTCCCTTCCG CTCGAAGGAC GAGTAGATCT GATCATGCCC AAACCTAAGC 
CCGTACCTAG AGCTGCCATC TCCCAACTGG CTGCCGCAAG TACGGTAGCG CCATCCGTTA 
GCCCCTCAGC TCTTACTCCG CCTCCCGCAG ATGCGGTCCC AGCCCCTGCG CCTGCTCCTG 
TCCTGACTCA GACAGAGCAA CAGACCGCCC AACCTTTTGT CTGGGACGCC CAACGTTCCT 
CCCCACCAGC AAGCGCTCCA CCGGAAATGT CCGTCCCCCA CACATACTAC CGCAACGCAT 
GGGAAGCTCC CCTTTCCCAA CAATCATCCT ATTACGCCCA CCCCGAGTCT CACCAACCCC 
AGGCTGAACA CAAAGAACCA GAGTATCCTA CATTGCCAAA GGAAGTGACG GGGGATAGTT 
GGTATGCGAG GTTTGCGACG AGCACGCCGG ATAAGCGTGC AGTAAGTGCA GTTTTCCCGT 
GGGAAGAGAA AACCGGCAGC CATGGGTATG GACATGGGTC CAGACCGAAA CCGGAGAGGG 
TGTTCCCGAA AGGAGAGGAA CCGCTACCCC CTCTTGTGCA GCAGTTGATC CATCCTTTGC 
AACCGCCGTC CATCTCGATA CAGTACGCCA CTCCTACCGA CTCTTACCAA TCCCAGCATC 
CCTCTCACGC AACGGGGATG GGAATGGCAG GACAAGCACA AGCACCGAAA AGTCCTTCCC 
CGCCACCAAG ACACGTGTCC ATGGTAGAAG CTATGGCATC GTATAAGAAT GTGTGGGATG 
ATATTCCGCA GATAGGGAAG TATGTGGATA TCATGAGCGG GAAGACTGGT GGAAGATCTG 
TCAGAGGTTT GTCTACCCGT GGACACGGAC ATGGGCAAGG TCATATTCAA GGTCATAGTC 
AAGGGCAAAA GCAGTCACAG GCGCAAAGCC ATGAGAGGAA CGTCTCTCTC CAGTCCCTTC 
AGTCTGTCCC GGGTACACCC CGTACTCAAT ATTCCACTTT CGGTAAATCC CCGCGGCTTA 
CTAATGCGAG GGATCTAGAA AGACGAGGAA GTTTGGAGCA ACCTGAAGAT TCCGCTGATG 
GGGATGATGA AAACTCTACT TCGGCCTCGG AAGAGGAAGG TGGAAAAGGC GGGGAAGGAA 
AATCGTCGAA GCCGTATAAG GGCAATAGGA AATATAGAGA TCGGTGGGCA CAGACGGATA 
GAGTGAAGAC GGTTGATGAG ACAGTCCAGA CGCAGACGCA TGCTGGGGAA GAGATGGCTG 
GCGGAGGGTT GAAAATGTGG GGGCTGCCTC ATGCTTCTGC CCATGGACGG AAGAGCAGCA 
AGGAGATTCC TTTCCCCAGT GGAAGTGGGA ATGGAAGAGC AGGAGGGGGA GGGCAGCGAG 
AAGCTCAGAC TCAACACCAA TCGACTTATT ACGAGTACCA ACAACAACAC CCCCACTCCC 
AGCAGCCTCG ACAAGGGAGT ACGGCAAGCC CGAGCCAGAA ACCCGAGTTA AACGCTCGTC 
TTCCGGATTA TTCGTTTGAT TTCAAGGGGG CTACTTCCCA TGCGCAAGGG ATTGCCCAAG 
CACAGGCACA AGCCCAAAGT CAGGCTCAAG GACAGGGGGC CAACTCCAAC CTGAACGCAC 
AGCATAGGCA CAAGCCGAGC GGATCATTCT CGACCATTTA TGGTGGTCGA GGGAGGGTTT 
GGGATCCGAA CACGGATGTG GAGGTAAGGA GACGGGATAG TCAAGAGGTC CTGGCGAGAT 
TTATGCAAGG CAACTTGGGG AGAGGATGAT TAGATCTTCT CTTTTTTCCT TGAAACGTTG 
TGCGGAGCGC AGGGAGCGTA TCTAGGAGCC TCCTGTTCCC CGTATGCGTC ATAACAATGT 
CCCGACAGGA CTGGATTGTA TCTTGTGTTG ACCTCGATAT ATCGAGGAAA CCTATCCATT 
AGAGGAGTTG TGCAAAAACA AAAAAATATC AAAAAAAAAC GAGACAGCCT GAGGTTGTAG 
CTATATTTTA TCTTTTTTAT ACAATCTGTC TGGTTTAATT ATCCATCTGT TTATCTCTGC 
CAATTATTTC TCTTTTGCGA TGTGTTTAGA TTTGGGTTTT CTTTTTTTCT TTTTTTAATG 
GGGATGTCTT ATATCAACAT AAATATACCT ACATTTGGGA TAAACAAAC 

 

Protein sequence

MSLPNAFVTL LTTSSYLPGA LVLLHALQDL HPAPRDFQIV ALVTPETVDA ATIGELRRAG 
YDLVIGVEPI GSGKAGQVGL ELMGRPDLNF ALTKLHLFRL APFFSTLIYL DADILPLRPI 
SHLFTSTAPH VFSACPDTGW PDCFNSGFMV IRPRESDWDG LKGMLKDGEG EDGLYREAGN 
GSFDGADQGL LNEWFSEEGG GGDWNRLSFT YNVTPSAAYT WAPAYKRFGH KISNVHFIGP 
NKPWTSLPGR PAGVSNVKGK ENSYDYLSLI DRWFAVYDKH VRPASALDPD ISRRFAVPQT 
IAAWDSHANR ARAAATVLSE DKLELSELKA ATERGVNAFK PGQYTSLPLE GRVDLIMPKP 
KPVPRAAISQ LAAASTVAPS VSPSALTPPP ADAVPAPAPA PVLTQTEQQT AQPFVWDAQR 
SSPPASAPPE MSVPHTYYRN AWEAPLSQQS SYYAHPESHQ PQAEHKEPEY PTLPKEVTGD 
SWYARFATST PDKRAVSAVF PWEEKTGSHG YGHGSRPKPE RVFPKGEEPL PPLVQQLIHP 
LQPPSISIQY ATPTDSYQSQ HPSHATGMGM AGQAQAPKSP SPPPRHVSMV EAMASYKNVW 
DDIPQIGKYV DIMSGKTGGR SVRGLSTRGH GHGQGHIQGH SQGQKQSQAQ SHERNVSLQS 
LQSVPGTPRT QYSTFGKSPR LTNARDLERR GSLEQPEDSA DGDDENSTSA SEEEGGKGGE 
GKSSKPYKGN RKYRDRWAQT DRVKTVDETV QTQTHAGEEM AGGGLKMWGL PHASAHGRKS 
SKEIPFPSGS GNGRAGGGGQ REAQTQHQST YYEYQQQHPH SQQPRQGSTA SPSQKPELNA 
RLPDYSFDFK GATSHAQGIA QAQAQAQSQA QGQGANSNLN AQHRHKPSGS FSTIYGGRGR 
VWDPNTDVEV RRRDSQEVLA RFMQGNLGRG