Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH03270 |
Symbol | |
ID | 3259038 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | - |
Start bp | 179785 |
End bp | 182246 |
Gene Length | 2462 bp |
Protein Length | 675 aa |
Translation table | |
GC content | 53% |
IMG OID | 638258157 |
Product | hypothetical protein |
Protein accession | XP_572497 |
Protein GI | 58270682 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.280704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTGTTCTGCG GCCATGTCAA AGCCCAAACC AGGTCTAGGG AAGGGCATCG GAAAGGGCAT CGCCCGCACC CTCTCCGTGG CCCACTCCAC GCCAGACTAC GCTCTAGTAC CGACATGGGA TCCACCAGAG ATCGTCCTCG CCCACCCCGC CCGTCTTCGA CACCCGCCGG CTTCAACTCG ATTACCTATA TTCCGCCTTT CTGCCATCCC TAGGCCATAC CTCTCTCAGC CTTACTCATG CCCTTACCCA TACTCTTACT CTTACTCAAC GCTCTCAACA TCACCACCAC CGCCTGCACA GCCAATGCCC CTCTCCCCCG ATCGGGTACT TTATTCTTAT CCTTCTCTGC CCCCTTCAAC AAGTATAGAC GTCCTTCTGT CCGCTCTTGA AATCAATTCT CATACCTCTT ACACCTCCTT ATTCAATTCT TCTTCTATCG CTCTCGATTC CTCCCCTTCC AGTTCATCGC CAAGCTCAAG TTCATCAGCA AGGCCAAATA TACTGCCAGT CCCCTACTCC CCTGCTGGTC CTCGCGATCC ACCATCCCCG CGATCGACCC AGCAATCGCT CAAATCCCGC TCGCTCAACT CTCTCTCTTC ATCTCTCGAT TCTTCCTCCT CAGCCCCGCC CCCTCCGGGT CATTCTTCTG GCGGCGGCGG TGGTGGTGGA GTTACCTTTG GAGCGGTCAT TCCGCCCCTC GCTACGTCTG ATGGGGGCGG GTTACCTTCT TCATCATTCA TCTTCCACCT CGGTGCTTCT GGTTTGGCTA AAGACCGGCC TCGCACTTCC TCTTCCTCCT CATCACCAGC CAGACCTTCT ATCCCTCCAC GTCCCCGCTC TTTTCCTCTC CTCTCCATCC CCTCCCCCCC TTCCTCCGCC CTCAGGTCCA TCTCCATAGG GGAAGACTCC TACTTCACCC GCCCTGATGG ACTATGTATA GCAGACGGGG TGGGTGCGTG GGCACGAAGT GGAAGAGGAA AAGCGGATGC CGGGCGATGG AGTGCGTTGA TGACGCATTT TTGTGAAGAG GAAGTCGGGA ATTGGTGGAG TGGGAAGGAC ATTTATTTGA GAAATCCGAG AGGCAAAGGC AAGGGCAAGG GCAAGGAAAG GGATAAGAGT TCGTCAGTGC AAAGTAAGGA GTCCTCGGGC AGAGGGAATG ACAAGAGCAA TGTCAAGGGG AAGGGAAAGA GCAGCGCAAT GGAGGAAGAA GTTACAGAAG GAGAAAAGGA AAGACGACCC TTGGATCCTG TAGAGATAAT GCAGAGGGGC TACGAAAAGT GTTTATCCTG CGCCATCTCC GAGGTATGTT CCACCTGTGC TTCCCCTTTC CCGCACTTCT TCCCCAGCTA ACCCTCCCTC TTCCTCTTTT CCACTCCCCC ACTTCCTCCA AACAGGGAAT AAACGGATCC TCAACATGCC TCCTCGCCCT CCTCCACAAC TCCACTCTTC ACGTCGCCAA TTTGGGTGAC TGCTGCCTCC TCTTGATTCG CGGAGGAAAA GTCGTCTTCC GGACGGAGGA GATGCAGCAT GCGTTTAATT TTCCTCTCCA GGTGTGTATT TTCTCCCTTC CCCTCTTTCC CCGTCATTGT TACCTTCCCC GTCATTCAAA AAGAAAAAGA ATTTGAAACT GATTTTCCCT CCCTTTCCCC CTATCGTCAT TTTCATCTTC CTGTTCCAAT ACGATACGCC CATGAAAATG AACACGAATA TGGATATAGG TCGGCACGCA CAGCAGGGAC GAACCCATGA AAGACGCAAT GCGATTCGAC GTGCCTGTCA AGAAGGGTGA CATTGTCGTT GTTGGGAGTG ATGGGTTGAT GGATAATATG GTAAGTCCCA AAAGTCAAGT CTTCAGATCT CAGCCCAGTC TCCAACCCCC CATTCCCCAA TCCCTGTTTT CTATTGCCTG TCTCTAACCT CCAAACCACA AAAACAACCG ACCCATTGAA AAACGCTAAC GCCTCATCTT TTAACTGCAC AGTTTGACGA AGACATTCTC GAAGTCCTCT CCCAACTCTC CCCTTCCCCG TCCCCATCTC CCTCCCCACC ACCTCCACAA CCCGTCTCGT CATCCCCGCA AAGCCCTTCC CCCACACATA CCCACACGCA CACCGACACC CACACTCTCA CCCTGAATCC CCAAAAAGCC TCTGAAGCCC TCTGCACTCG CGCTCGCCAA ATATCCGAAA CCACAACGAC AACCACTCCA TTCATGTGTG CCGCCATCGA GGAAGGAATA GACTTTGTAG GGGGGAAGAA GGATGATATC AGTGTGCTGG TTGGGGTTGT TGGAGTGAGG AGTCTGAAGG AAGTATCGGT GAAGGATGGG TTGGAAGGGG TAGAGGAACA AGGACAGGCA CAAGGCAAGG AAGGAGGGAA GGAGAGGCTG ATGTTGTATC ATTGATGTTC TTTCTATAAT CGAAAAAGAC AAGGCGATCG AAGGGGTTGT AACGCTGTAG AC
|
Protein sequence | MSKPKPGLGK GIGKGIARTL SVAHSTPDYA LVPTWDPPEI VLAHPARLRH PPASTRLPIF RLSAIPRPYL SQPYSCPYPY SYSYSTLSTS PPPPAQPMPL SPDRVLYSYP SLPPSTSIDV LLSALEINSH TSYTSLFNSS SIALDSSPSS SSPSSSSSAR PNILPVPYSP AGPRDPPSPR STQQSLKSRS LNSLSSSLDS SSSAPPPPGH SSGGGGGGGV TFGAVIPPLA TSDGGGLPSS SFIFHLGASG LAKDRPRTSS SSSSPARPSI PPRPRSFPLL SIPSPPSSAL RSISIGEDSY FTRPDGLCIA DGVGAWARSG RGKADAGRWS ALMTHFCEEE VGNWWSGKDI YLRNPRGKGK GKGKERDKSS SVQSKESSGR GNDKSNVKGK GKSSAMEEEV TEGEKERRPL DPVEIMQRGY EKCLSCAISE LTLPLPLFHS PTSSKQGING SSTCLLALLH NSTLHVANLG DCCLLLIRGG KVVFRTEEMQ HAFNFPLQVG THSRDEPMKD AMRFDVPVKK GDIVVVGSDG LMDNMFDEDI LEVLSQLSPS PSPSPSPPPP QPVSSSPQSP SPTHTHTHTD THTLTLNPQK ASEALCTRAR QISETTTTTT PFMCAAIEEG IDFVGGKKDD ISVLVGVVGV RSLKEVSVKD GLEGVEEQGQ AQGKEGGKER LMLYH
|
| |