Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH03220 |
Symbol | |
ID | 3259043 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | - |
Start bp | 200117 |
End bp | 202187 |
Gene Length | 2071 bp |
Protein Length | 403 aa |
Translation table | |
GC content | 48% |
IMG OID | 638258162 |
Product | conserved hypothetical protein |
Protein accession | XP_572491 |
Protein GI | 58270670 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0411031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAATTATATC TATCTTCCCC ATTATCTTGC ATGTCATCAT TCGACGATCA TGTCTAGTCT CCACCATCTC GTCCCACTTC TTTTTCTTAT CGCTCCCGCC CTCTCTCAAT ACACTGCAAC CTATTCACCT TACTCGCTGC CAGAAACAAC TGAACAAGGC CAATATGGCA CCAATGCCTG CGGGACATCA TCCTCCCAAG ATTCAAAATG TCAGAATGTG TACGTCAATG GAGTAGACGA TTTCTGTCTC TGGGGACCCC CGGAGACAAC AAGTAATGAA GGAGATGGAA CTAGTAAAAT TGGGAATGTG GAACAGATAG TCGTTAGGTG GGTTATGTTC TCCCATTACC GCTGTGAAGG GGAAGAGCGA TGGACCGGGA ACTGCATGGA GTGCAGTCGC GTGACCATTG TGGGGACTGA TAAATTGAAG TCACGCTAAA AATATCGCAC CTTTATAGCT ATTGCTTGAA GGACGGTTAT GGCACACGTC TCATTCCTCC CGGTTCAATT ACAGGCGCCC ATTTTGTTAA AGTCCTAAGC GAAAAGGTCT CGTACGTCCA AGTCACTGGC GTCGGAGATG TAAGTGGGCT CTAGAATCCA ACAAAGGGAG GTTATATTTA TGATGGATGC ATGCTAATGG TACCTTGTAA CCCCTAAGCT TACCAAACTT TTGATTCCTG CAGGAGATGA CGGTGGTGAA CTCGACGTAA GTCTATTCGT TCATTTTAGG GGATAGCTGG CTGATAACTT GCTCCGTAGC CGCACTGTAT GTCTACATAA TTCTACTAGC CCCACCTACC CATTCGTCCA CAGTTGATAC GGCAGCTTAC TGACTTAATC GCCAACAGCT TGGACCGGCC TCGGTAACCC GCAAGGTGGT TTAGTATTCA CCAATGCTTT CACGGGATCT TATGAGCAAA CTCACGAGTG GACTAGCTTC ATGTCTGCAG GTATGTTTTC TTCCCCAGTC CATTGTGCCA TCTTCCCACC TTAGCTTCTA GTGCTGACTT ACTGCTCTGT TCGAAGATGA ATTCTGCATA CGAGCATGTC GGGACGGAGA CAGTAAGCTT TCCCCCGTGA CGGCACCTGG CTTTCGACGC TGATCCCTGT TTACCCCAGA CGCTGCCGCT TATTGCCAAC ACATCTACGA CGTTTGTGAG TTCTCTTTTC TCCTCTTTTA CCCTTCATTG AGATCTCACC CATTTCATGC TATAGTAAGC TGCAGCTTCA CAATCCCAGG CGACATGTCC CCCGGCTTCG ACTCTTGTCT CGGTGAACCC ACTGAAGAAG CACCAGGTGT CTACTCTGGT TCCACTTTCC GTCAAGGCGA CCCTACGACC CCGGCGCCTC ATCCGGCTGG GGCAACTTCC GAGTGTCAGG TTTATTCGTC AGTTGGTGGG GGTAACGCCA ACATTGGCCA AGGCGCTGTT GTGTCAGCAG CGACAACGAC GCGGAGCTCC AGTAGTGCAG AAGAGACGAA CAGCCCGAGC TCAATTTCAG CAATAGATTC CACTACATCG TACACGTCCT ACACCTCACC TTCAAACACC ACCGTCTTCG CATCTGCCAC CTCCACCCTT TCAAACTTGA GCACTGTAGC GACCACCACC ACTATCATCA CTTCCGCCTC CTCATCTTCT GTCCCGTCCT TTTCGTCCAC GTCTTCATCT TCATCTAATG CTGCGACAAC AACAGCCCTC AACAATGCCC AATCCAACGG ATATCCAAAG GCTATCGAGG GGATGGGGAT CGCGAGTGTT TGCATAGCTG GAATGTTCGC ATTTTCGTTC TTTATTTGAT AAGAGCGAGG AACTCCACCC ATAATTTGCC GGGATGCTCG GGGCGGTTGG AATAGGTCGT TAGAGAGGAG AATGGATATA ATGCCGATCT ATGGTCGCTA GCTTTTCGGT GTCAAATACG GTTTAGGGGG TGTACGAGTA GCGGTCTTGT TGTACATCAT ACTTGGAGCA TATGGACGTT ATACGGACAT TATTTGAAGC CGCAGACTTT TTTAAGAATT TATTGCAGTT CTATAAAACC TTTACCACTT TTTAGTTAGG ATCATATAAT T
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Protein sequence | MSSLHHLVPL LFLIAPALSQ YTATYSPYSL PETTEQGQYG TNACGTSSSQ DSKCQNVYVN GVDDFCLWGP PETTSNEGDG TSKIGNVEQI VVSYCLKDGY GTRLIPPGSI TGAHFVKVLS EKVSYVQVTG VGDLTKLLIP AGDDGGELDP HSWTGLGNPQ GGLVFTNAFT GSYEQTHEWT SFMSADEFCI RACRDGDNAA AYCQHIYDVL SCSFTIPGDM SPGFDSCLGE PTEEAPGVYS GSTFRQGDPT TPAPHPAGAT SECQVYSSVG GGNANIGQGA VVSAATTTRS SSSAEETNSP SSISAIDSTT SYTSYTSPSN TTVFASATST LSNLSTVATT TTIITSASSS SVPSFSSTSS SSSNAATTTA LNNAQSNGYP KAIEGMGIAS VCIAGMFAFS FFI
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