Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH03130 |
Symbol | |
ID | 3258983 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | + |
Start bp | 226737 |
End bp | 228526 |
Gene Length | 1790 bp |
Protein Length | 366 aa |
Translation table | |
GC content | 51% |
IMG OID | 638258172 |
Product | conserved hypothetical protein |
Protein accession | XP_572482 |
Protein GI | 58270652 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.835174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGTGCGATTC GCATACCGTT CGCTCTCTTT CGTTCGGGGC AGAGCTCGGC GACTTCGGTA TTCCCCTATG TAGGAAGGAA GAATCGTTGA AACGACTACA TATACAGACT GACGTTCTAG CTCTCCCACA TCCTCAGCAC AGCATATCAT CGCACTAGTT ACTTCAAGCA TTTCGATCAT CTCAAAAAAG TTCCATCAGA CTCAACAACA ATCTCTCACG ATGACAATTG AAATCCCATC GTCTAACAGG AAGGCCCGAA TTGGTGTGAT GGGCGTGGGC CGAATGGGCA AACGACATGC CAGAAATGTG CGATAAATTT CATCTTGTAG GCCCTGTGCA ATTGCTGACC AAGTGAATGC CTTACAGATC GCCGAGTTCG CCCCTAGAGC CGAGCTTGTG GCGGTCTCCG ACCCATACCC CGAGGCTCTG GAATGGGCCA AGGCCAACTT GCCTTCCACA GTTAAGTCAG TAGACTCTCG CGTCTTTCTT CAGTTGAGAG AGGCTGACAT ATTCTCGCAG GACGTACAGT TCCTCTGAGG AGTTGATCAA CGATCCCGAC ATTGAGGGAA TCCTGATTGC CACTGAGACC GCCTTCCACG CCGAGTACGC CATCAAGGTC ATTGAGGCTG GCAAGGTAAG CAAATCGCTT ATGCGTCAGC GTGCCTTGAC TTCCACTAAC GTGACCGTAC TCTTAGCACG CACTTATTGA GAAGCCGATC TCGGTGGATA TCGAGCTTAC GAAGCCGGTC GTGGCAGCTG CAAAGAAGCG TCCTGATCTC AAGGTCATGG TGGCTTTCTC GAGGAGATGT GAGTGCCACT CGGCGAGATG CAATTTGTGC ATTCCACTGA CATTGTACGC GATTCTTAGT CGACGCATCC TACCAAGAAG CGGCTAAGCG GATTGAGGAT GGACAACTCG GCTCAGCGTA CCTTATCAAG TCTTGCACAA ACGACCTTTA CGACCCTACT GGCTACTTCT TGAACTACGC CAAGAAGTCT GGCGGCATTT TCATGGACTG CGGCATCCAT GACATCGACA TTGGTCGATA CCTTTTGAAC GTTGGCAACA CAGATGGGCT CAAGAATCCT GCCAAGCAGG TTTCCAAAGT CTTCGCAACG GGGCTGAACA CTGTTTACCC CGAATTGGCA GAGATGGAGG ATTGCGACAA CGCTCTCGGC ATAATTGAGT TCGAAAATGG CTCAAAGTTG AACATTCATC TCTCCAGGAC TTCAATCCAC GGGCACGACG TCGTGTGTGA GGTGTTTGGG ACTAAGGGAA AGTTCGTGAT CAACGCTGTA AGTCGTTTCA GCCTGCGTCT GGACCGAGAG GGTTATTAAC ACGAGCTTGT CCAGGTTCCC AACATCTCCC GCGTCGAGAT CCGCGACGAA CACGGTGTCC GAACGGAGTC TCAGTGAGTC TACTTGATTC TCGCAGGCCT CAGATTGCTC CAATGCTAAA ACTTGTCAAA ATAGCCCCTC ATATTATGAG CGATTTTTCG AGGCTTTTAA GACAGAAGTC CAAACTTTCT CAAGTTGTAT CTTGGACGAC ACACGTAGGT CACTCGCTTT ATTTGTGTCC TCAATACTGA CGGTCCCATG CAGCTGTTCC CACTCCCCCC CACGACGCCC TCGAGGCCGC GCAAATCGCC ACAGCGCTCA CTCATTCATT CCGCACTGGC AATCCTGTAT ACTTCGATGA CAATGGAGAG CCTATTTTGA AGTAGAACCG ACGAGGAGGT CGTGCTTGAG ATTACGTATG AGCTTGATTT TGGTGTCATC GGTTTTGGCC
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Protein sequence | MTIEIPSSNR KARIGVMGVG RMGKRHARNI AEFAPRAELV AVSDPYPEAL EWAKANLPST VKTYSSSEEL INDPDIEGIL IATETAFHAE YAIKVIEAGK HALIEKPISV DIELTKPVVA AAKKRPDLKV MVAFSRRFDA SYQEAAKRIE DGQLGSAYLI KSCTNDLYDP TGYFLNYAKK SGGIFMDCGI HDIDIGRYLL NVGNTDGLKN PAKQVSKVFA TGLNTVYPEL AEMEDCDNAL GIIEFENGSK LNIHLSRTSI HGHDVVCEVF GTKGKFVINA VPNISRVEIR DEHGVRTESH PSYYERFFEA FKTEVQTFSS CILDDTPVPT PPHDALEAAQ IATALTHSFR TGNPVYFDDN GEPILK
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