| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02980 |
|---|
| Symbol | |
|---|
| ID | 3259295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | + |
|---|
| Start bp | 280674 |
|---|
| End bp | 283252 |
|---|
| Gene Length | 2579 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638258187 |
|---|
| Product | chromatin binding protein, putative |
|---|
| Protein accession | XP_572468 |
|---|
| Protein GI | 58270624 |
|---|
| COG category | [B] Chromatin structure and dynamics
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG5165] Nucleosome-binding factor SPN, POB3 subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTATCTTAA TTCAAGTTAC TCTTCATTTA CCGAAAAGCC ACCGGCGGCT ATTGGCAGGA
TGTCCACAGT GACCTTTGAA AATAGTACGT GCCGTTGATG CTGTGGAGTG CAGAAGCTGA
CGGGACTGAT TAGTCTTTCA CGGTGATTCT GCCGACTTGG GAAGTGAGTT CTGACGGGCT
TCAAAAAGCG GTCATGGGAT GTGTATGCGA TGGGTGCACT GGCAGAGGGG GATTTGTTGC
TTTCAGGTGG ATTTTTGGCA AGGATTGGTT GCCGTGGAGC TGTGGAGTCC GGATCCGGAT
GGCGTGGCTT TGAGCATCAT AAGTCGTGGC CGGATTGACC TTGATGAGCT TTTCAAGAAT
TCTCGACCAT CACCGTATTC CCACCGTCAA CCACTTACCA TGATGTGCTC GACTGATTTA
AAGACAAAGA GCTGACCCTA TCTTCTAGAG CTCCGTTTTA ACCCCGTTGG ATTTGGGTGG
AAGGCGTACC AGAGCGAGGA CAACAACCCC ACAACTTATA ATGGTTCGGA TATCAGGCAT
GCCACCTGGT TCCGGTGAGT GAATGTCGTC AACACGCCTT ACTGATTGCC ATCTTTAGAG
TCGCCCGTCA TTTTCAGCTT CGACTGGGTA TGCGAAACTC TGAAAAGCCT CGGATCTCGT
TTGACGGTTT CAAGAGAGAT GTGAGTGGCA AATTCTGACG TAGTTATTTT GTCATAGCTT
ATACGTGCTT CTATTGCAGG ACTTGGATAA GATCAAGCGG ACTCTCCAGG AATATTTCAA
CATCACGCTT GAGACTAGAG ATACGAGTTT GAAGGGATGG AACTGGGGTG AGGCGCAAGT
GAAAGGTATG TGCAGTCTCA TCCATCGAAT CTCGAGCATG CTAACAAATT GATAGGGAGT
GATCTAGTCT TCCAAGTTCA AGGCAAAACC GCATTCGACG TTCCTCTCTC TCAAGTCGCC
AACTCCAACA TTGCCGGCAA GTACGAAGTC GCGCTCGAAT TCAACCCTCC TTCCAATTAC
AAATTTGATC CCAAAGACCT CAATAAGCGT CCTCCTGACG AAATGGTTGA GATGCGTTTC
TACATTCCCG GAAAGAGTAT GAAAAAGGCT GGTAGCGATG CTGGTAGTGG TGGCGAGGAG
ACGGAATTGG ATGAGGAGGG TAATGAAGTC AGTGCCGCGG ATGCGTTCCA CAGTTTGATC
AAGGAAAAGG CGGACATTGG AGCTGTCGTC GGGGATAGCA TTGTGGTGTT TGAAGACTGT
CTAATCTTGA CACCCAGGCA AGTTCTTTCA CTTGCTATCT CGTCGAAACG ATCGCTGATG
TATTTGCAGA GGCCGATTCT CTATCGAAGT TTACGCCGAC TCCATCCGAC TAGTTGGTAA
ATCCACCGAC CACCGAGTCC CATTTACTTC TATTCACCGG ATCTTTCTTC TTCCCAAGCT
TGACGATTTG CACGTTCAGC TCGTTCTTGG TCTCGACCCT CCTATTCGAC AAGGCGCTAC
TCGATACCCC TTCCTTGTCG CACAGTGGCC CAAGGATGAG GTCGTCAATG CGGAACTCAA
TCTCACAGAG TAAGCTACAT TATTATTCCC ATGGATATGT GCTGATCAGT TTTAGTGAGG
AGCTCGCACA ATACCCTGAC TTGGAGAAGA CTTATGAAGC GACCACCTTC CAGGTCGTCT
CTCGTGTGCT CAAAGCATTG ACTGGAAAGA AGGTGACCCC CCCCGGAAGC TTGAGAAAGT
GAGTTTCTTG CCATCTTTTT ACCACGTAAA CACAAACTGA TTCCCTCCTC AGCGCTCAAG
GCCTCAACGG TATCAGAGCT AACGTGAAGG CCGTCCAAGG AGAACTCTAC TTCCTCGAAA
AAGGCCTGAT TTTCATCTCC AAACAACCCA TTCTTATCGA TTTCTCCAAA ACCGATAGTA
TTTCATTTTC CCGTGTCGGC GGCGGTGTCG CTTCCGCCCG AACATTCGAC ATGCGCGTCG
TATCCAAGAC CGGAGGCGCT GACCATGTGT TCAGCGCTAT CAACAAGCAA GAAGTCGGAC
CGATCAGCTC GTTTTTGCAG TCGAAGAATA TCCGACTCAA GAATGAGATG GAGGAGGCGA
TTGTTGATAT CGATGAGCCG TTTAGCGACG ACGATGAGGA GATGGAAAGT CCTTCTGAAG
ACGAGAGACC ATCGAAGGCA AAGAATGACA AATCGAAGAC TAAGCCTGTG AAGAAAGCAG
CCGATGACGA TGAAGATGAG TCTGGTAAGC GCTCCCTTCC TCTTTCCATT TTTTCTCATA
CAATGCATCG TTTGCTGACG AAAACCATGA CAGATGATGA AGACTTTGAA GATGAATCTT
CTGACGGCGG CTCACCAAGT GAATCTGACT CTGACGACGA TTCTGGCATG GCTTCAGATG
CAAGCGACCC TATGATGGAA GAACTGCGGA AGAAGACTCA AGCGAAGCGA ACAAAGGCAA
AGGAGACAAG TGGGAGTGGA AGTGAGGATG AGAAGCCGAA GAAGAAGAAG GCGAAGAAGG
ATGACGATGA ATAGAGGGTA TGGGGTAGTT GAGAGGGGCG AGAGATGCCT GTGTCCAGA
|
|---|
| Protein sequence | MSTVTFENIF HGDSADLGKL RFNPVGFGWK AYQSEDNNPT TYNGSDIRHA TWFRVARHFQ
LRLGMRNSEK PRISFDGFKR DDLDKIKRTL QEYFNITLET RDTSLKGWNW GEAQVKGSDL
VFQVQGKTAF DVPLSQVANS NIAGKYEVAL EFNPPSNYKF DPKDLNKRPP DEMVEMRFYI
PGKSMKKAGS DAGSGGEETE LDEEGNEVSA ADAFHSLIKE KADIGAVVGD SIVVFEDCLI
LTPRGRFSIE VYADSIRLVG KSTDHRVPFT SIHRIFLLPK LDDLHVQLVL GLDPPIRQGA
TRYPFLVAQW PKDEVVNAEL NLTDEELAQY PDLEKTYEAT TFQVVSRVLK ALTGKKVTPP
GSLRNAQGLN GIRANVKAVQ GELYFLEKGL IFISKQPILI DFSKTDSISF SRVGGGVASA
RTFDMRVVSK TGGADHVFSA INKQEVGPIS SFLQSKNIRL KNEMEEAIVD IDEPFSDDDE
EMESPSEDER PSKAKNDKSK TKPVKKAADD DEDESDDEDF EDESSDGGSP SESDSDDDSG
MASDASDPMM EELRKKTQAK RTKAKETSGS GSEDEKPKKK KAKKDDDE
|
|---|
| |