Gene CNH02840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH02840 
Symbol 
ID3259227 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp318852 
End bp321332 
Gene Length2481 bp 
Protein Length571 aa 
Translation table 
GC content48% 
IMG OID638258201 
Productexpressed protein 
Protein accessionXP_572455 
Protein GI58270598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCGTTGTTTC TGGCCAGTTG TCCTCTGTTC ATTGGCCGTA GGAAATAACC CACACCATTT 
TGACCTCCTT CACAATGAGC TTCCACCCGC AAAATGAGCC CGCCTCACCC GTCTCCGAAC
AAACTCGGCA TACAGACGCA AACCCAGTAC CCGAGTCCTT GAGCCCTTCC TCGACTTTAA
CTTTGTCCTC AGCAGCTACA CCTGCACCCG TGCCCGTGTC CGCAGCAGCA GCTACACCTT
TCTCACATGC CCATCCCGCG TTCCCAGCGC TTCCCCAACT TGGAAAACTA CCTACCACCC
CACAAGAAAT CCACCAGATC CTCTCGCTAC CCGCAAACCA ATTTACAGCC AAAGCCCTCC
CGCTCCTTGC AAAAGTCGCA GATGGGAAGC CGTTTGAGGG AGCTTCGCTG AAAGCGTGGG
AAAGGCGGAA TGCCGGCGAA CAGCTGTTGG CGCTGTACGA GGCCGGTGAT GAAGTATATG
AGACCGCAGA TGAGAGAGTG AAAGAGATTG GGGGAGGCCT TATCTATGTG CTGTACGCAA
TGATTTACCT GGGGGTTGTT TTGTGGATTA TAAAAGGTTG CTGATACTTT TTTTTGTTAA
AACAGGTCGG CAAGGATTAC TCTTGGGCAA GGCAACGCTG TGGTATGGAG TGACAAGATG
TTGAATTTCG CCATCCGTCT CTGTGAGCTC GCAGATCCTG CCCAGCTGCG GATCTGCCAC
CAAAGAGGTA TGTCTATTTC AAAAGAAGCA AAGAATTATT GAAGCTGCTG ATGCCCGAAA
GTTGCTGCAT TTGCATGGGG CCTTTTACGT TTGTCACAAC AGCTTTCAAA GGTGAGTTTT
GAATCTGCTA CACCGCAGAG AGAGGGGACG GTTTAAAGCT GACGGAGAGT ATGTTTCCAA
AAAAAGGTCA AACTCGTCAT CCCTGCAATC ACCTCGCTCA TCCAAAAGCT CAATTACCAT
CAAACATTTT CACCCATATT TGGTGCTTTG CTAGAAGCTT GCCTAGTTAC TCGTCAATTT
GACCATCCTA GCTTGGGGTT GGTCCTCGAT ATCATCTTTT TGGATGTCAA GACTGTAAGA
AAAAGTCTTG TCCTTGACCG CGCTGCTGCT GCTGATGTAC ATTTAACAGA CAGCGCCTAC
TTACTTGGAT ATCCTAACGT ATTATCATCA CGCCGGTGCT GTCACCATGG CTGTGGGAGA
CTTTTGTAAA GCCAAAGAGT ATTACTTGAC TGTGGGTTAA ATATCTCATG TCCGCATTTC
GATCTCATCG GTGACTGTGT GTGATAGGCT GTGACGGTTC CGACTACGAC TGCCTCAGCT
ATTCAACTAG CTTGCGCCAA GAGGGCATTG TTGTGCGAAT TGATCGTCAC AGGAAAGGTA
AGTGTTTCAT CTCCACTCTG TATCAACCTC CCACGGGTTG ACGCTTTTAC GTCTCGCCAT
CTGCTGACGA TCCCCCTTTC TTTTGTCTCG GGTTTAATCC TCAGAAAATC GTTTGGCCCA
AGTATACACC CACTCCAGTG ACCAGGATCA TTGAGAAATA TGCTACCTCT TATAACGAGT
TGGCCAAGGA GTTTGAAGCT CACAACTGGG CGAATGTACG GAGAGCTCAC ACGGTGGCAG
AGTTTGAAAA GGTATCTCGT CTATTACTTA GCGTAATATA TATATATACG GTGATACTCA
CACGATCACG TTTTAGGATT GTAACAGCGG CTTAATTGAG CAGGTTGTCA ACTCTATTCA
TCGTCATATG ATTTTGCGAC TTCGAAAAAC GTATATGCGA TTGACTGTGG ACAGTCTTGC
TAGACGATTG AGGGTCGGCG ACGACATGCC CAAAGCTGAG CGGGTCGTTG CGATTTTAGA
TGACATGGTG AGTCCTTATC CCTTTTTTTT ATTTTTATTC TGTATACCGT CAACGGACTG
TGATAGGAAT GGAATCGAAA GCTGACAGCG TCACAACTGC TATTAGATAA AATCGGGAGA
AGTCTCTGCT ATCTTGACGC CGTCTGCGAC GCAACCCCAA TCGCATTCCC AAGCGATCAT
CGAGTTTATC ACAGCGACAG AAAGTTTTAC TTCCCCAGCG GCGTTGGGCC GTTTGGAAAG
GGCGAGTGCA GTGGCTGCAT TGTTGCAGGA GCATTTAGCG GAAGGTAGTA GGAGGTTGGG
GGCGAGTAAA GAATATCTTG TTAAAGTCAG TCCCTTCCTT TCTTTTTTTT TAGTGACCCG
ATTTCTGATT TTCCCTGCAA TAGCAAGCAC AGTATTTAGA ATCCAACAGT AAAAAGAACA
AGGGAGACGA ATTCGATCAG TTGATGGAGG CAGAAGAGAC GATGGAGCCA GGGGCGGGCA
GTGGGAAGAT GATGGGAAGC AGCGGTGGCG GTGGATCTAA GAGTGGCAGT TTGAGGGGCG
TGGCCTCGAA TATGGCTGAT ATAGGCTTTT GACGAAACAT GCCCGAGAAG CCGAGTTGGT
CGGTGGGGCT CGAGTGTGTA T
 
Protein sequence
MSFHPQNEPA SPVSEQTRHT DANPVPESLS PSSTLTLSSA ATPAPVPVSA AAATPFSHAH 
PAFPALPQLG KLPTTPQEIH QILSLPANQF TAKALPLLAK VADGKPFEGA SLKAWERRNA
GEQLLALYEA GDEVYETADE RVKEIGGGLI YVLSARITLG QGNAVVWSDK MLNFAIRLCE
LADPAQLRIC HQRVAAFAWG LLRLSQQLSK VKLVIPAITS LIQKLNYHQT FSPIFGALLE
ACLVTRQFDH PSLGLVLDII FLDVKTTAPT YLDILTYYHH AGAVTMAVGD FCKAKEYYLT
AVTVPTTTAS AIQLACAKRA LLCELIVTGK KIVWPKYTPT PVTRIIEKYA TSYNELAKEF
EAHNWANVRR AHTVAEFEKD CNSGLIEQVV NSIHRHMILR LRKTYMRLTV DSLARRLRVG
DDMPKAERVV AILDDMIKSG EVSAILTPSA TQPQSHSQAI IEFITATESF TSPAALGRLE
RASAVAALLQ EHLAEGSRRL GASKEYLVKQ AQYLESNSKK NKGDEFDQLM EAEETMEPGA
GSGKMMGSSG GGGSKSGSLR GVASNMADIG F