Gene CNH02730 details

Gene Information

• Locus tag: CNH02730
• ID: 3259190
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: +
• Start bp: 354587
• End bp: 356586
• Gene Length: 2000 bp
• Protein Length: 452 aa
• GC content: 48%
• IMG OID: 638258212
• Product: NADH-ubiquinone oxidoreductase, putative
• Protein accession: XP_572446
• Protein GI: 58270580
• COG category: [C] Energy production and conversion
• COG ID: [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
• TIGRFAM ID: [TIGR01962] NADH dehydrogenase I, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACCATCTCTC CAATCTCGCA ACCCTTCTTC CTTCTCTCCT TTAACACCAA AAGGTCACCG 
CCAAAATGCT TAGAAACCTC CGGCCTCTCC TCCGCACCGT CCCAGCCCCA TCTCGATCAG 
TCATCAGGCC GCTTTCCACC ACATCAAAAG CATTTGCCAC GGCTCAGTCA TCGCCCGTCC 
GGGCGCACTC TGTAGAGGAG TGAGTTCTTG CATCGACAAG GGCATTAGCG GCAATAATGA 
TGAGAAGGAA CAAATGCTGA TGTCAATCAC GAACTCAGGC TCCATGCTTT AACTGCGGAA 
GAGATCTTGA AGGAAGGGGG AGTGAGAAAA GAGGCGGAAA TGAGACACTT TACAGGTTCG 
TGTGCCTCGC GTACAGTACC TCCCATCTAG ATAATCAGCT CAACTCTTTC ACGTCTCGCC 
GGGTGTTGTA TAGTCAACTT TGGTCCCCAA CATCCTGCCG CGCACGGTGT GCTTCGACTT 
ATCCTCGAAC TTAACGGTGA AGTACGCATG TTTTACGACA AGCTTGAAGT TTTGGTCTGA 
TTGCGTTGGG AATTAGGAAA TCCTCCGTGC CGACCCACAT ATTGGTCTTC TTCACCGAGG 
TACTGAAAAG CTCATCGAGT ACAAGAACTA TACACAGGCT TTACCCTACT TTGATCGACT 
GGACTATGTT TCTATGAGTG TGTATTGGGA AAAAAAGAGA AAGGCGAGGG AACAAAACTG 
ATTATGCCGC TACAGTGACC AACGAGTTGT CTTACTCCAT TGCTGTCGAG AGATTGCTCA 
ATATTGAAGT GCCGGAGCGA GCCAAGTGGA TTAGAACATT GTTTGGAGAA ATCACCCGTG 
TTCTTAACCA TCTTATGGCC GTCCTCACGT GAGTATCCTT TTTGCCTGCC TTTTTGCCCT 
GTACCTGACG GGCTGTATAC AGCCACGCGA TGGATGTTGG TGCTCTTACT CCCTTCTTGT 
GGGGTTTCGA AGAGCGTGAA AAGCTCATGG AATTTTACGA ACGAGTATCC GGAGCTCGTA 
TGCACGCGGC CTACGTCCGA CCTGGTGGCG TTGCTTTCGA CCTCCCGCAC GGCTTGCTCG 
ACGATATCTT CAAGTGGGCT ACACAATTCT CCTCTCGAGT AGATGAAGTT GAGGAGGTTG 
TTACCGGGAA CCGAATCTGG AAGCAGAGAA CGATTGGTAT TGGACCTGTA ACTGCTCAAC 
AAGCGTTGGA CTACAGCTTT TCCGGTGTTA TGCTTAGAGG TAGTGGTATT CCTTGGGATA 
TCCGAAAGGT GGCTCCTTAT GATGCGTACG ACAAAGTGGA GTTTGACGTT CCTGTTGGCA 
AGAACGGTGA CTGCTGTGAG TGTTTTGTTC TTGTTATTTT TAGTAAAAAG AAGAAGAAGA 
AGAAACTGAC CATGCATTTT AGATGACCGA TATCTCTGCC GAGTGCAAGA ATTCCGAGAG 
TCCCTTCGAA TCATTGGACA ATGTCTTAAC AAGATCCCCG ACGGTGCTTA CAAGGTTGAC 
GACCACAAGA TTGTCCCTCC CCCTCGAGCT TCCATGAAGG AAAGCATGGA GAGTCTTATC 
CACCATTTCA AGGTAAGCCA TCATCCAGTC TCAGGGTGCG GTATATGATC TATGGCTAAT 
CTATTCATCT CCTTTTTAGA TCTTCTCTGA AGGTTATTCT GTCCCTCCAG GAGAAACATA 
CGCCGCTATC GAAGCCCCCA AGGGTGAGAT GGGTGTCTAC CTCGTTTCCG ACGGTACCAA 
CCGCCCTTAC AAGTGCAAGA TCCGAGCACC CGGTTTCGCC CACTTGGCCG GAGCGGACTT 
TATGATGAGG CACCACTTTT TGCCGGATGC GGTCGCTATC ATTGGTACTA TGGATTTGGT 
GTTCGGAGAG GTTGACAGGT AATTTGGTGG GTGGAGACGT AATGGGAGAC GGGCGTTGTA 
TGATAGAGGA TGCATTTTTT ATTCATTAGG TCATATTTTT GTTTTCCTTG TTATGGTTGA 
TGATGCGTGT AGCGAGCATA 

 

Protein sequence

MLRNLRPLLR TVPAPSRSVI RPLSTTSKAF ATAQSSPVRA HSVEELHALT AEEILKEGGV 
RKEAEMRHFT VNFGPQHPAA HGVLRLILEL NGEEILRADP HIGLLHRGTE KLIEYKNYTQ 
ALPYFDRLDY VSMMTNELSY SIAVERLLNI EVPERAKWIR TLFGEITRVL NHLMAVLTHA 
MDVGALTPFL WGFEEREKLM EFYERVSGAR MHAAYVRPGG VAFDLPHGLL DDIFKWATQF 
SSRVDEVEEV VTGNRIWKQR TIGIGPVTAQ QALDYSFSGV MLRGSGIPWD IRKVAPYDAY 
DKVEFDVPVG KNGDCYDRYL CRVQEFRESL RIIGQCLNKI PDGAYKVDDH KIVPPPRASM 
KESMESLIHH FKIFSEGYSV PPGETYAAIE APKGEMGVYL VSDGTNRPYK CKIRAPGFAH 
LAGADFMMRH HFLPDAVAII GTMDLVFGEV DR