Gene CNH02460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH02460 
Symbol 
ID3259229 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp434539 
End bp436511 
Gene Length1973 bp 
Protein Length528 aa 
Translation table 
GC content48% 
IMG OID638258239 
Productbud site selection-related protein, putative 
Protein accessionXP_572421 
Protein GI58270530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.31227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCCACATACC CCATTTCACT GCATCGCCGA TCATGTCAGC CCTCGACAAC AGCACTGCAC 
CCTCATTGCA AACCAAAAAG CGAAAGAGGA CAGGCAAAGA GCGAGAAGAA AGGAAAAAGG
CCGCAATCCA GGTGAGTCCT ATACTTTCTC AAGTTCATGG CGTCAAATAC TTATGTCGAG
TAGGCCAAAC AGGAAGCCGA AGCTGTTGAA AAGGCAAATG GTGAAGTTGA GGGAGGCACC
ATAGTGCAGG ACAGTGTGCA AGAAACTGTT GCACCCCAGG AGGCTGCTTC TGTAGAACAT
GAAGCTGGTC TATCATCGGT TGATGTTGAA AAAGTTGCCA AACGAATCGT AAGTCTCATT
ACGAGCTTGA TGGTTTGCAT TCTTGCGAAA TTGACGGACC TATGCTAGCC CCAAGCTCTG
AAGTCTCTTC ACCCTGTATT CAAGCAAGCA AAAACTTTCG AAACTCGCCG TCTGATCAAG
AAAATCAAAT TTCTTCGGTG AGCCTGTTTT TATTTAAATC TTTTAGCAGT GGACGGCCTT
CTAACGATCG TATAAAGAAA CAAGGATGTC AAGGATGAAA CTGCTGATTT GGAGTCTCAG
TTGAAAATTA TTCATGTAGG TCATACCTAT TCAGTCGTCT GTGTACTGGT TCTAACAGTG
ATTACAGGAT ATCCAACTAC AACCTCTCGC CAAATCTCAT CTTCTGGTCA AGCTTCGTAA
ACATCCTCTC TTCAAACAAA CCCCTCTCCC TAGCGAGATC TCATCCCTCC TCTCTCCTCC
TTCTGCCACG ACAGCCTCCT TTGCAGGTAC TAGTGCCACT CCCGCCTTGA TCAACAAAGC
CGAAAACCGA CTTTGCAGCG CCAAGATTGT GGCAGAGAGA ATGAAGAATG TTGTTAGTTG
GACTGTATGT GAGGGTGGCG CCAAACTTGT TATCGAGAAA AAGCCGGCCA CCATTAGCGC
TGGGAAAGGC GGTAGCAAAA AGGCAGCAGA ATCGACTGAT GAGGAAGACG ACGAACAAGA
AGAAGGGGAG GAGGCCAACG TTGGAGACAT TTCACGTTCA ATGGTTAATG GATCCGACTC
TGAAGAAGAT TCGGACGATG AGCGTGTTCT TCAAGATCGT GCTGCAGATG CAGCAGGCTG
GGAATCTGGA TCCGTCTCTG GCTTTGACAG TGAAGGTGGA GAGGTTGACA TCGCCAGCGA
GTCCGAGTCC GAGTCTGACA ACTCCGACGC CATTGCTGTC CCTTCTGCCA AACGTGCAAA
GACCGCCGTC CCTCCTCTCC CTCCGAAATC CAAGCCCCTC AAGTCTGAAA AGGCAGATAA
GCCTCCCAAA TCCGCCAAAG ATTTGACTTC CTCTATCTTC TTGCCTTCAC TTTCCGTCGG
ATTTACTCGT GGGGATGACG ATGATTCTGA TCCTGATCTG GATGATGACC CCAATGGAGT
CGCAGGGAAA CAGCCGGTAG TAAGGAAGAA CAGGCGAGGT CAGCGAGCTA GACAGGCGTA
AGTTTTACAT TCACTCCCAC TCCGCTTTTC GCATAATATA TATGGCTTTT AGTATCAATG
CTGACTGTCT TTATCTTCTG GTAGTATCTG GGAGAAGAAG TATGGCAAAA ATGCGAAACA
CGTTGTCAAA GCCCACGAGG AAGAGAAACT TCAAGCCCAA AAAACCAGGG AGAAAGCCGA
AGCGAAAGGG AGAACGAGAG ATTCAGGATG GGGTGCCAAA AGTGGTAAAG CTGTTGGACC
TGCTGTCGCT GCGGGCCCCG CTCAAACTGC CGCTGTGTCG CACACGCAAA AGGTGTATTC
GGAGCCAAAG CAATCTCAGA CAGAGCAGAA GAAATCGCTT CACCCGTCTT GGGAGGCGGC
GAAGCTTCGT AAACAGAAGA TGGGAGTTGT ACAGACCGAG ATCAAAGCAC AGAAAATCGT
GTTTGATTAA TCTTTTATTC TACTGCTATG TTACCCGGAT CTTATAATGA TTG
 
Protein sequence
MSALDNSTAP SLQTKKRKRT GKEREERKKA AIQAKQEAEA VEKANGEVEG GTIVQDSVQE 
TVAPQEAASV EHEAGLSSVD VEKVAKRIPQ ALKSLHPVFK QAKTFETRRL IKKIKFLRNK
DVKDETADLE SQLKIIHDIQ LQPLAKSHLL VKLRKHPLFK QTPLPSEISS LLSPPSATTA
SFAGTSATPA LINKAENRLC SAKIVAERMK NVVSWTVCEG GAKLVIEKKP ATISAGKGGS
KKAAESTDEE DDEQEEGEEA NVGDISRSMV NGSDSEEDSD DERVLQDRAA DAAGWESGSV
SGFDSEGGEV DIASESESES DNSDAIAVPS AKRAKTAVPP LPPKSKPLKS EKADKPPKSA
KDLTSSIFLP SLSVGFTRGD DDDSDPDLDD DPNGVAGKQP VVRKNRRGQR ARQAIWEKKY
GKNAKHVVKA HEEEKLQAQK TREKAEAKGR TRDSGWGAKS GKAVGPAVAA GPAQTAAVSH
TQKVYSEPKQ SQTEQKKSLH PSWEAAKLRK QKMGVVQTEI KAQKIVFD