| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02350 |
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| Symbol | |
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| ID | 3259294 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | + |
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| Start bp | 466819 |
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| End bp | 472753 |
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| Gene Length | 5935 bp |
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| Protein Length | 1614 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638258250 |
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| Product | protein-histidine kinase, putative |
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| Protein accession | XP_572410 |
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| Protein GI | 58270508 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.16806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTCCTGTT ACATACGCGG TCCAATAATC CCTTCTTGCC CATATAATAG CAAATCCTCG
TACTTTCTTC TCTTCATCCC ATCCAATCGC TTCAAGCCCC GGTTTTCGCT GCCTACCTTC
ACCATTCCTC TTGGTGTACA GCTCGACGTC CCAGTCGCAT ATCAGCTCGC TGCTGGACCA
GGGTGGTGAA GTCGGCCACA TTCGATCATA TCAGGGGTGT TGTTCAAAAA AAAGGAAGAG
AAAAACCTTT CTGGCCATGA TTTTAGGAAC CGATATCGAC CTGTCGTCTA TACCAACGGC
GTTTCTCGAG GTGTGTATCT CGGTCCCTTG CGAGTACACG ATGAAAGCTG ACCATGAGAA
CGCGTTCCCC GTCACCTTCC AAATTTGTTC TGGCTTGTCT TTTGGACGAC CATCTAGGCT
TATCCTTTCC CAGCGGTTGT GATCGTGATC GATTCCTCTC TCCGCCCAAG ACCGCCGCTC
CATTCCAGAG ACACAGATGT GACCGTTCGG CAAACTGATG GCCAAATATC ACCCCTTGCG
AGTCCTCCAG TGCAACAGTT CGCGTCAGCA CCCGTGGCGT GGGGGAATCA GCGATGGAAT
GAATTGACTC AGGGGAAAAC AATTGCAGAG TGCGTGGATG TGATTTCACA GAACAAGTTG
CAAACTTGGG TGGAAGGTGA CATTGGCGAA AAGTCGGAGA GTTTTACGCT GGACATGAAG
TTGCCGGAAG GCGTAACTCT TCATCTGGCA AAGACGATAT TGCCATTAAG TCCACCGTCC
GCCTCTCAAT CGTTTTGCAT CCTTACATCG CAATATATCA ATAAGCCGGA AAGCTTCACC
CCATCAATCT CATCCAGTGA TGTTCTTTTC TCTCCTCTAC CGCGATTTTC CCAGACTTTT
TCTCGGTCAT CTTCTTTTTC GTCCAACCCT AGAAGGTCGA TTGATGTCCC TGCTTCATTA
CCGGGACACC GGGGTTCTGC TACATCAACA AGTAGCAACC TGCGCTCTTC GGTCGATTTG
ACCTCCCCTA ATTCTGAATA CTCTCCACCA AGCCGTGAAC AAAGCACGTA CTTCACCCAT
CGCTTCGCGG TCAGAGAAGA ACGGCCCTCA GTAAGGCGGA GACGGTCACC GCCAAACTCG
TTTAAGAGAT CAAAACCCCC TGAGAGCCAT GCTCAGGACT GCTGGGACTT GGTAGAGAAC
TTCGACTGGT CAAAAACAGC ATTAGGGCCG AGAGAACAGT GGATGGATGC GTTAGATCCT
GTTCTGGCAA TCACTTTTGA ATCTAGGACG GCAGATTGCG CCTGGCTAGG GCCTGATCTA
GAGCTAGTTT AGTGAGATAC TATCTGTCTT GCAAGAATAA TGGTGGCTGA CTTTTACGAT
CAGTAATAAG GCGTATCAAG AGCTGATTGA CCATCCCAGT GCTTTTGGAA AACCTGCACG
ACAAGTCTGG GCTACCAATT GGGACTACTT GGAACCCCTG GTCAAACGAT GTCTCAGTGG
GACCCCGGTC TACAAAGACA ATGACCCCCT TTTCTGGCGT CGATACGGCA ATGGTCGACT
TCTGGAACAT TATCACACTT GGCGATATGT ACCGATAACA GGCAAAGATG GCTCAGTGCT
TGGTATCTTC AACCAGTCAA TTGAGGTCAC CGACTCGGTA CTGCTAGAGA GGCGAATGGG
CACGACCAGA GAACTATTGG AACACATGTC GTTTATTCGC ACAACGGAGG ACTTTTTCAG
CTCGATTGCC GACGTCTTTA GTCAAAATCC TACCGACATA CCGTTCGCAC TTTGTTACCG
GGTCCGACAA GTTGACACCG ATGGCACATT TGTCCATTTG GACGTCTCTC TTCAGTCTTC
CGTCGGCGTA CCCGAAGGCC ACCCGTCTGC TCCAGATCAA ATTCCTATCA GCTTCTTTAA
TGGCAACCCT TACCCTAGCA ATGTCGAGCG ATCATTTTCT CCCGCTTTCT CAATCGTTTC
AATTCACTCT TCGAGCAGTC ATCGGGTCTG TCACGTCTCT GAAGACACTA CACAGTGGCC
CATCGCCAAA GCCCTACAAA GGCGACAATG TGTCATCATC GAAGAATGTT CGCAATTAAT
AGAAGGATAT CCTATCCGCC GCTGGGATGA GCTTCCATTC TCAGCCATTG TCGTGCCCAT
ATGCTCTGAG GGATCTCCCG AAATTCCTGA CGCCGTCGTT ATCCTTGGTC TCAACGTCCG
ACGTTGTTTT GACCATGAAT ACGATTCCTG GATTCACTCT ATTCGATCAC AACTATCTTC
GGCCCTTGTG ACGGTCAAGG CGCGTGAAGC TGAACAGAAG ATGGTTGAGG AAAACGCACG
TATGGAGAAA GCAAAAGTCG CCTGGTTCAG AGGAGCCGCA CACGACCTTC GCAGTCCACT
AACTCTTGTC GCTGGACCGC TTGCCGATGT GCTTGACTCG GATCTGAGCC CCAATCAGCG
CACATCTTTA ACGGTTGCGC AACGCAATCT TGATCGGCTA GTGCGCTTGG TCAACGCCCT
CATGGATTTC TCGAGGGTGG AAGCTGGACG GATGGAAGGA CGGTTTGTTC CTACGAACTT
GAGTCAATTC ATAACACAGC TCGCAGCTCT TTTCAAGCCT GCAGTAGAAA GACTGGGGTT
AGAATACGTA CTTGATGTCC AGCCAAGAGA AGAGCTTGTT TTCGTCGATC CTGTTCTGTT
TGAGACCGTG GTATCAAACC TTATTGGCAA TGCGCTCAAA TACACTGAAA CGGGCTGTAT
CACTGTTCGG GTGAAATACA CGGATTACGC AGAGGTCTCC GTCATCGATA CCGGTGTGGG
TATACCGAAA AACGAGTTGG CATTGGTGAC CGAGTGGTTC CACAGGGCGA GTACTGCCAT
TCATTCGGGA ACTCAGGGAA CCGGATTGGG ACTGGCGTTG GCCAAGGAGT TGCTCAAGTT
GCACAAAGGA GAATTGCTTG TTGAGTCTCA AACCGCCAAT GAGTCAGGAG GTCCTCATGG
GTCCATTTTT ACCGCGAGAG TTCCTCTTGA TTTCAAGCCC TCACCATCGG CTCATATCAT
TCCGTCCGTC GAGTCTCCCA AGACGTTTGG TAAATACAGT CAAGTCGTTG CAAACGAAGC
CATGCGCTGG GTCGGTGACT CGGACGACTT TAGTGAGGCG TGCGACATGT CGAGCGGTAC
CGGAGGCTCA AGTGCTAGTA ATGGCTCTGG AAACACGACC GCCTTCGGGC CCAAGTTTGC
AGATGCCTTT TTGTTTGACA GGAACGACGT CGTGCTTATT GTGGAAGACA ATGCCGACAT
GCGTGAATAC ATACGGCAGC TTTTCACCCC TTACTGTACT GTAGTTGAAG CTTGCAACGG
TGAACAGGCT TACAGTATGG CTACCCAAAA CCCTCCCAAC CTCATTTTGT CGGACGTGCT
CATGTCCAAA TTATCCGGTA CGGAGCTGTT ACAAAAGATC AGATCTCATC CTGACACTCG
CATTGTGCCT ATGGTCCTTA TTTCGGCTAT TGCTGGTGAT GAGTCTAGGG TTGAGGCTCT
GCTAAACGGC GCTGATGACT ATCTTGCCAA GCCTTTCAAA CCCAAGGAAC TCATCGCGCG
CGTTCACCTC CACATGCAAG TTGGCAAGAA ACGTGCTAAA CTTGAAGCGC TATACGCCCA
GCGTGAAACG GAGCTGACAG CTCTATCTGA CTATTGTCCG ATCGGCATCT TCCGGGGAGA
CAAATATGGC CATATTGTTT ATGCCAACGC AGCTTGGCGT GCGCAGAGCG GTCTTTTGGT
GGGTGATCCC AACGATTGGG CATCTTATGT GCACCCGGAA TCGAAAGCGC AGCTCTTGGA
AGAATGGAAT CAGTGGCTGA GGGGGGACTT GAAGGAGTTC CGAGCGGCTT GGAGATGGTC
TAATGGTATT CCTGTCAGGA GCATCTTGGT CCGATTAGAT CATGTCAAGG AAGGGTTTTC
TGGGTTAATT GGGTGCGTGG TGGATGTGTC TCATGAAGAG AGACGATTAA TCGAAGCCGA
GGAAAGAAGA AAAGAAGCGG AAGAGAGTAA ACATCAGCAA GAGCTCCTTA TTGACTTGAC
AAGTCATGAA ATTAGGACGC CGGTGTCAGC AATCCTACAG TGCTCAGATC TTGTTAAAGA
GAATCTTGTA GCTCTGAAGG ACCAGTTGAG AGGAGCGGGA CCAAAGGGCT TTGTGCCGAC
TCCAGAACTG CTGGCTGATC TTGAGCAGGA TGTGGAAGCT TTGGAAAGTA ACTCGCCATC
TCCTATCGAA CTAATTTCTA AACTGACAGT GATTCTTTTT TGAAGGTATT TATCAATGCG
GTCTTGTGCA GGAACGTATT GCCGGAGACG TTCTTTCCAG CACATCTTCC AGTGGTGAGT
TTTATCCAAC CCATATTGTG CTACAATGGT ACTGACCTGT ATTCCACTAG CTGTCCGAAA
GATCACCATC CAATACGACG TGTCGTTTGT CCCTCCTGCT GATGACTCGT GCGCCGTCCC
TTCGTCTGGC GTGCCCGACA TCCTTCCTGC AAAAGAAAAT ACTCCTCTAT GGCTGTTTGT
CAGCGTTACC GATTCTGGAC CTGGTATGAC AGAGCAAGAG TTATCTGTCT TGTTCCAAAG
GTTTGCTCGT AAGTGCTGAG CCCATTTCTC TTTGTTGAAG TTTACGTTGA CGAGTCTTGA
TTTCAAGAGG GCAATAAGAT GATTCATACA AAGTATGGCG GAAGCGGTTT GGGGCTGTTC
ATCTGTCGAA GTGAGTGACT GGAGGAAACT TTTTTTTTTC CAGGGGGGGA TACATGACGC
TGAAACCGTC TATAGAGATT ACAGAGCTTC TTGGCGGTCG TATTGAAGTG CTTAGCCAAC
TCGGGCACGG TAGTGGTGAG TTTTCGTCTG CTTTGTTATC CATTGTATAC CGCTGAATCA
AATGCCTTTT TCCCAAGTTT TCCGATTCTT CATCAAAACG CGCGCTGTCG CCCCCCCTTC
CGCCATCGCT GCTCTCGTGG AATCCTCTCC TCTCAAACCG ATATCCGCCA CTTCTCCTTC
TTCCTCGTTA GCCATGAGCC GATCATCTTC TCGAAGTACA AACGTCACCA CGCCCATAGA
GGGTAGCGGG ACTGAACACG TGTTGATTGT GGAAGATAAC CTAATCAATC AGACTGTCCT
GAAACGACAA CTCATCAAGG CGGGTCTATC GTGCAACGGT GAGTCGTCCA TCCCCACCTT
CTGTGATTCC CGCACTTACC TTGGAATAGT CGCGAGTAAC GGCCTTGAGG CTCTCAATAT
CATCCGTGAA ACCCATCGGC AACACCGACG GGGTGGGCCG AACCGTAAAA GGCTATTTGA
CGTGGTATTG ATGGATCTCG AGATGCCGGT GATGGATGGT ATCACCGCCG TACAGGAGAT
ACGAGGATCC GAAGCCGCGG GGACGTTGGG AAGGAATATG GTGATTGCTC TCACGGGGAA
TGCTAGACAA GGACAAATTG ATCATGCCTT GGCTTCTGGG TTTGACGACG GTGAGTCGGA
AATACTGGTT TTATTTGTGC CCGGAGGGCG ATGTGGATTA TGGACTATTC TGACATTTGA
GTGTAGTCGT CATCAAACCA TATATCCTGG TGGATTTGTT GAAAAAGATC AAATTTATGA
AAGTTAGAAG GTTGGAGTTG GAAACTGCGA AAGCTCAAGA AGAGTGAGAG CTGAAAGGGT
GAAGCAGGAG GGAGTGCGGG GTGCAAAAAA AGGAGTTTTT TTTTTGGGTA TTGAAACTGT
TTCTTTAATG GACGAGAAGG GTTCCCGTCT TGGGTTTTGG TTTCGGTACG CAGGGCTCTC
AAAGCTCTGT TTTGTTGTAG CGGTAGTTAC AGGATATCAC ATTTATGTTT CGAGTATAAT
ATATAACGGT CAAGGTTAGT TCTCGGAAGG CATAATTAGT AGCATTTATC TATCG
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| Protein sequence | MILGTDIDLS SIPTAFLEAY PFPAVVIVID SSLRPRPPLH SRDTDVTVRQ TDGQISPLAS
PPVQQFASAP VAWGNQRWNE LTQGKTIAEC VDVISQNKLQ TWVEGDIGEK SESFTLDMKL
PEGVTLHLAK TILPLSPPSA SQSFCILTSQ YINKPESFTP SISSSDVLFS PLPRFSQTFS
RSSSFSSNPR RSIDVPASLP GHRGSATSTS SNLRSSVDLT SPNSEYSPPS REQSTYFTHR
FAVREERPSV RRRRSPPNSF KRSKPPESHA QDCWDLVENF DWSKTALGPR EQWMDALDPV
LAITFESRTA DCAWLGPDLE LVYNKAYQEL IDHPSAFGKP ARQVWATNWD YLEPLVKRCL
SGTPVYKDND PLFWRRYGNG RLLEHYHTWR YVPITGKDGS VLGIFNQSIE VTDSVLLERR
MGTTRELLEH MSFIRTTEDF FSSIADVFSQ NPTDIPFALC YRVRQVDTDG TFVHLDVSLQ
SSVGVPEGHP SAPDQIPISF FNGNPYPSNV ERSFSPAFSI VSIHSSSSHR VCHVSEDTTQ
WPIAKALQRR QCVIIEECSQ LIEGYPIRRW DELPFSAIVV PICSEGSPEI PDAVVILGLN
VRRCFDHEYD SWIHSIRSQL SSALVTVKAR EAEQKMVEEN ARMEKAKVAW FRGAAHDLRS
PLTLVAGPLA DVLDSDLSPN QRTSLTVAQR NLDRLVRLVN ALMDFSRVEA GRMEGRFVPT
NLSQFITQLA ALFKPAVERL GLEYVLDVQP REELVFVDPV LFETVVSNLI GNALKYTETG
CITVRVKYTD YAEVSVIDTG VGIPKNELAL VTEWFHRAST AIHSGTQGTG LGLALAKELL
KLHKGELLVE SQTANESGGP HGSIFTARVP LDFKPSPSAH IIPSVESPKT FGKYSQVVAN
EAMRWVGDSD DFSEACDMSS GTGGSSASNG SGNTTAFGPK FADAFLFDRN DVVLIVEDNA
DMREYIRQLF TPYCTVVEAC NGEQAYSMAT QNPPNLILSD VLMSKLSGTE LLQKIRSHPD
TRIVPMVLIS AIAGDESRVE ALLNGADDYL AKPFKPKELI ARVHLHMQVG KKRAKLEALY
AQRETELTAL SDYCPIGIFR GDKYGHIVYA NAAWRAQSGL LVGDPNDWAS YVHPESKAQL
LEEWNQWLRG DLKEFRAAWR WSNGIPVRSI LVRLDHVKEG FSGLIGCVVD VSHEERRLIE
AEERRKEAEE SKHQQELLID LTSHEIRTPV SAILQCSDLV KENLVALKDQ LRGAGPKGFV
PTPELLADLE QDVEALESIY QCGLVQERIA GDVLSSTSSS AVRKITIQYD VSFVPPADDS
CAVPSSGVPD ILPAKENTPL WLFVSVTDSG PGMTEQELSV LFQRFAQGNK MIHTKYGGSG
LGLFICRKIT ELLGGRIEVL SQLGHGSVFR FFIKTRAVAP PSAIAALVES SPLKPISATS
PSSSLAMSRS SSRSTNVTTP IEGSGTEHVL IVEDNLINQT VLKRQLIKAG LSCNVASNGL
EALNIIRETH RQHRRGGPNR KRLFDVVLMD LEMPVMDGIT AVQEIRGSEA AGTLGRNMVI
ALTGNARQGQ IDHALASGFD DVVIKPYILV DLLKKIKFMK VRRLELETAK AQEE
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