| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02260 |
|---|
| Symbol | |
|---|
| ID | 3259306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | - |
|---|
| Start bp | 502254 |
|---|
| End bp | 505128 |
|---|
| Gene Length | 2875 bp |
|---|
| Protein Length | 732 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638258261 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_572563 |
|---|
| Protein GI | 58270814 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.476412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCC TGCCCATGAA CAATGGGAGC GAGGAAGGGA CCCAGAGCTG GCGGTGGGCG
CTTGATTTAG TGCTATATCA GAGTGAGACG CTAATATGTC ACCAGAGGTA TGATGCTCCA
TACTCTGCTG GGCCTGCTTC GGATCTAGGG AACCAATCAA ATCACGGCAG GAAAGGCAAA
AATCCTTCTG AGCCCTCAAT GGATGTGATC TTCTTAGGGC TGGACCCCGA ACTGACAGAA
GACGACGTAA GTATCGATAG TGTACATATC GAAGACGCCT CAGATTGACT ATCCCTTTTT
GCGCAGTTCC TTGGATATCT TCGCACCGAA CATAAAGCAG CTATCTCGGG CGTCAAGATC
GTCCGTGATA AATTCACAGG AGCCTCAAAA TGCTTTGGTT TTGCTCAATT CCAATCCCTG
GATGGGGCTT CTGACTTCAT CAACAACAAG TACGTCAGAA TGTTTGTCAT ATGTAAAAGT
AAAAATCATT GAAGCGCTTG AATAGTTATC CAACGGTCCT TATGCCCGCC CTCTATGCTC
ATTCAGACCC TCGCAAGGTT AAGATTGACT TTTCAACTCC CCAACAGAAC CCTCATTCAG
GACATGGCTC ATACCAGTCT GCTCCCATGT ATGTCCGCCC AGGCCATGAT GGGATGCGAG
ATATCGGGTC CCCAGGTGGA GGAAAAAGGG TGCTCTTGCT GCGTGGCTTG GATTCCATGA
CAACTCCGGA CGAAGTCATT CGTCGAATTG GTCAGGAAAT TGCTAGAATG GTGGGAAAAC
AAGGAAGAGA GTCCGAGGCA GAAAGTTCAA TCGTGAGGGT AGTCCTTATT GTCGACAAGT
CAGCGAGAAG TAGTTGGGGT TATGGATTTG TAGAGCTGGC CACCAGCGAG GTAAGTTTAT
TTGCGTTCCA TAAGCTTTCT GCTAACATCC TTTCAGTTGG CTTCTGCTCT TCTACCGTTC
TTACTCTCTC CACAGCATCA ACCGACGGGC TTCCTCATTC ACGATGTCCC AGTTGCCACC
TCTTTCTCTA ACCCCTCTTC TTTTGTGCCC GTTTCTGCAG GTCCTTTGGG TGGAGAATTC
ATCATCCGTC CTTCTCGTTT TGGCGGCTTT GGAAGTGAAA CGATAGACAA GCCTGAAGGC
CAGTGGTGTG CGTATTGGCA CGAAAAGGGT GGTGCCATGG AAAGTGTACC TCGTGGAGCG
CCAGCTATCG GTGAAGATGG AAATGTCGAG CTTACCCCGG CCCATCGAGC GTTCCTTGGA
AGTCTAGCGG GTGTACCACA GTCGCAGGCG ACATCTTCCC AAGGTCCTCA GAGCGTACAA
ACAACGGGGA TGACATCAGC CAGTGTTGAG GGCGTCATGC AACCAATCAA AATAGGCATT
GGCAAGGGGA AGAAGAAGGA GGAAGCCGCA ATCATTCCCA TCACGCAAAA AAGGAGCTTG
TTGGATGATG GCGAGGAAGA TGATAAGGTT GGGAAGGATA CCGTGTTGCT GTCCAGGAGT
ACGTCTACTA GGTGTCTAGT AACAATCATT TCTAATATGC CTGTAGCGAA AGGCGCTCGT
ATCGTTCCAC CAACATCGTC AAGTCGGAAG GTGACCATTA TACTTTCTTC TGCTCCTTGT
CGTTTTCATT CTGGGCCCAT GCTTACCTGT AACATTGGCA GATCGCCAGC AACATCAACA
AGTGGAACAC GAAACAGTCA GAACTTGCCA TACCTGATCC CGTGTCGGAG AGCGCGCCAC
CAAAGGGTAT CTCGGACGCC AACTCTGCAA TTGGCACTCG TCGACCCGTA AATGCAGAGT
CAGGTTCAAA CGTAAAACAG TCTCATTTAT TCAAAATGTG GAACTATCCT ATTGACTTGA
CTTTCCTTCA CAAACAAGCC GGCTCAGCCC ATCGTGATGC CTGCACCATC ACCATCTGTT
TTGCCGACAG CAACCCAGGC AGAGGAGTTT GACTACACTG ATGTGTCGAC CCTTGCGACA
ACTGGCAAAG TGGCCTGTCT GCTGTGTCAA AGGCAGTTCA AATCTGAGGA TATCCTTCGG
AAACATATCG CTCAATCGGA TCTTCACAAG GCTCGCATCT ATCCCTTTTA CTCTGTATCC
TGTAGTGGGT TCAGAGCTAT GATGATCAGA ACTGACCTAT GCTCCTGGAT ATACCGGATA
TACCTTGCTC ATCATCAATA ATTACAACAC TATCGTCTTT TGCAAACGTA TTTGGACCAA
CAGAACAACC TGCAGGATAC CGCAATATGC CAAGCTGGTC AACGCCGCAA AGATGCCATA
AGCTCGTCTA CAACTACTCC CGAACCTTCT GCATCGATTT ACCGTGACCG AGCCGCCGAG
CGTCGTGAGG CATTCAACCA ACCTGCTGTT CCTTCCCGTG CCGAAAGGGA AGCTCTTGCT
GCCTCCACCG CTGCCTATCA AGGCAAGCGC AAGCCTCCTC CTGTCAAGTC CAAACAACCA
TCCTCCCCTG AGCCGAGCAA GCAGACAGAA GAAAATAACG TGGGTAACCA GCTGCTTGCG
AAGATGGGAT GGAAGACAGG TGAGGGATTG GGTTTGGCAG GTGAAGGCCG GGCGGAACCG
ATCAAAGTAC AACAGTTTGA AAGTCGCGCA GGATTAGGCG CATCTAAAGG GGTCGAGGCC
GGAAGGTGGA GCGGACCCGG AGGATGGCAG CAAAGGGCTA AGGACATGGT GAGTTTCTAA
TTTATGTTCA AGGAAGGCAC AGGAAAACGA TGAGGCGTGC ACATTCCACA TGCTTTTGAT
GCTAATCTTT GATCAAAGAC TAAAGAAAGG TACAACTCCG AGTCCGGCCA GAAATAGCTT
AGCGCAAGCA ACTGTCGACC AGAGAGTTCA GCCACACTCG GGCTAGTTAT CCAAC
|
|---|
| Protein sequence | MLILPMNNGS EEGTQSWRWA LDLVLYQSET LICHQRYDAP YSAGPASDLG NQSNHGRKGK
NPSEPSMDVI FLGLDPELTE DDFLGYLRTE HKAAISGVKI VRDKFTGASK CFGFAQFQSL
DGASDFINNN YPTVLMPALY AHSDPRKVKI DFSTPQQNPH SGHGSYQSAP MYVRPGHDGM
RDIGSPGGGK RVLLLRGLDS MTTPDEVIRR IGQEIARMVG KQGRESEAES SIVRVVLIVD
KSARSSWGYG FVELATSELA SALLPFLLSP QHQPTGFLIH DVPVATSFSN PSSFVPVSAG
PLGGEFIIRP SRFGGFGSET IDKPEGQWCA YWHEKGGAME SVPRGAPAIG EDGNVELTPA
HRAFLGSLAG VPQSQATSSQ GPQSVQTTGM TSASVEGVMQ PIKIGIGKGK KKEEAAIIPI
TQKRSLLDDG EEDDKVGKDT VLLSRTKGAR IVPPTSSSRK IASNINKWNT KQSELAIPDP
VSESAPPKGI SDANSAIGTR RPVNAESGSN PAQPIVMPAP SPSVLPTATQ AEEFDYTDVS
TLATTGKVAC LLCQRQFKSE DILRKHIAQS DLHKNNLQDT AICQAGQRRK DAISSSTTTP
EPSASIYRDR AAERREAFNQ PAVPSRAERE ALAASTAAYQ GKRKPPPVKS KQPSSPEPSK
QTEENNVGNQ LLAKMGWKTG EGLGLAGEGR AEPIKVQQFE SRAGLGASKG VEAGRWSGPG
GWQQRAKDMV SF
|
|---|
| |