| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02220 |
|---|
| Symbol | |
|---|
| ID | 3259251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | - |
|---|
| Start bp | 510326 |
|---|
| End bp | 511417 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638258265 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_572395 |
|---|
| Protein GI | 58270478 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0819] Putative transcription activator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATAGCAAAAC GGCTGTGTTG CTGAAGATCA TAAACGAAAT GCCATCCCAA AAGTTTACAG
AGTATCTTCT TAACAAATAC GTATGTCTGT CTCTGTCTCC CTCATAGGAC GAGACTGACT
CGAGGTATTC ATCTGTAGGC CGATGACTTC AAAGCGGCCA CCACCCATCC ATTCTTGGAG
CAAGCTGGAA AAGGTGCCAT TGACCCTAGA CCCCTCAGAG CCTGGCTCAA GCAGGATTAC
CTTTATGCCT ACGTAGGATA CATCAAGGTA TGTTTGTGCC GAATATCAGG ACGAATCTCA
ACTGATTATG CGTGTCTGCA ATATCGCAGT TTGCATCTTC CGTTTTATCC CATCTACACA
TCCCTACTCC CCTTTCTGCC CCGTCACCCA ATACGTCCAA AGCCATCTCG GTTCTCACAT
TTTCACTCGC CAACGTGAAA CGCGAGACAG ACTTCTTCGT GTCTACTGCC AAGGCTCATG
GGCTTGATGT CTTCTCCCCG GAGGCAAACG ATGGAGCCGA AGGTGGCTTG TTGGGCGAGT
ACAATGAAAT AACACGAGCG TATGTAGACT TTTTACACGC AGTCGGTGGG GTAGGCGCTG
TCGAAGAAGG CCTTGTGCTG CTTTGGGCTA TGGAGATTGT GAGTTCAGTG ACAGACCGTT
TGTAAGGCCC TTCAGAATGC TAAGACACCT ACCGCAGGCC TATTTGACCG CCTGGAGAAA
CGCCAAATCT TTGCGGCCTG AAACTCTTAC CTCTGCCGAT CCTTCAAGCC TTTCTCAAAC
ACAGCAAGCA TTGCTGAAAT TCGTTGACAA CTGGACATGC GACGAGTTTG TCGAGTTTGT
GGCTGATTGT GCCGAGATTG TGGATGGAGC AGGCATCGAA ATTGGAAGCG CCCTTGCTGA
GCGTTGTGAG ACAGTGAGTT CAAAGTTGGA TCGTCCTGAT ACAGTCACTG ATCAGAGTCT
GCAGGTATTC AAGAGAACCC TTTGGCTTGA ACAACGTTTC TGGCCTTCTG TATAGATGTC
GAGACAATAA ATAGAAATGC AGATATGGCA GTGAATCCCC AAATAGCAGA ATGCAACAAT
TTAATGCATT CC
|
|---|
| Protein sequence | MPSQKFTEYL LNKYADDFKA ATTHPFLEQA GKGAIDPRPL RAWLKQDYLY AYVGYIKFAS
SVLSHLHIPT PLSAPSPNTS KAISVLTFSL ANVKRETDFF VSTAKAHGLD VFSPEANDGA
EGGLLGEYNE ITRAYVDFLH AVGGVGAVEE GLVLLWAMEI AYLTAWRNAK SLRPETLTSA
DPSSLSQTQQ ALLKFVDNWT CDEFVEFVAD CAEIVDGAGI EIGSALAERC ETVFKRTLWL
EQRFWPSV
|
|---|
| |