Gene CNH02170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH02170 
Symbol 
ID3259334 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp523615 
End bp524895 
Gene Length1281 bp 
Protein Length319 aa 
Translation table 
GC content50% 
IMG OID638258270 
Producthypothetical protein 
Protein accessionXP_572391 
Protein GI58270470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGCA CCATGACCAT CGCCATTCTC CACGCTCGCT TCTATTTATC AAGCTACAAT 
TTGAGCTACA AGCACCGTTG GAACACTACA AGCAGCAAAC AACCCACAAT GCAGGACAAG
CCTCTCTCAG CACAAAGGAT CACCGAAGAG CGTGCGTTCA TAAAGCGCTA TACAGAAAGT
CTCGCAGACT ACACCGTCCA GTACCCTGCC GACTTTTCCG CACCCCTTCA TGAAAGGCCC
AGAAAGGTAC CAGCCATCGC TATCCCAGTC GCAGACCCTC CCTCGGCAGA TGCCATGGAT
GTGGATTCAC CATCCAAAGG TTAGTTTTCC TGATTTCACA TGCTCCAATC TCCTGTCCTA
ACGACATGCA AAGACACCGT CATCTCTCTC ACCGTCAAAT CACTCAAACC ATCTCTCACC
ATCCCCGTTA CCGCCCAGCT CACAGACACT GTCTCTGACC TCAAGACCAT CATTTCTAAA
TCATCTGCCT CAGCACCTGC TCCAGATGCT CAGCGTCTCT TGCTGAAAGG CAAAGCTCTA
ACAGACACCA AGCTCTTGAA AGAGTATGCA TTAGAGTCTG GCGCTACTGT CCATCTCATC
ATCAAAGCTC CTTCCGCCAC TCCTTCCTCC GCACCCACAC CATCCATTTC CACATCAGAT
GCCACCATCC CCCCTCCATC GTCAGTCGCT CCTCACCCTC CTGCATTGAC CATCACCACC
TCAGTCGACG AATCTTCCGA GGCTGGTACC TCTATGCCAC TCACCCTCGC AGATCAGGTT
GCTCCCCCAC TCGGTCCTCA ACCAGAAGTG TCTTCAGCAA CCTTCCACCA TACTATTTCC
GATCCTACTT TCTGGCAAAA GATACATGCC TTGTGTGTCA GCGAATTTGA TAACGAGCAA
GAAGCCAATT CAGCCTGGGA GACGTTTTTG GTCAGCATGA AGGGCGGACT GAGTGCCGGT
GAAGCTGCTA AAATCAGAGA TGTAGTTGGT GTCTGGGGCA TGGGAGGACA GTGAACGATT
AGATGACATG CTTTGTACTG TACCTGTATA ACCATGTGTT CGTGCTAAGA TATGACATTT
GTTACAGATG ATGCGATTCA GAAAAGAACA ACTCGTTATG GCTTCTTGAC ACCCCCAATC
CAAACCGCCT TCATCTCTCG AATCTCATTC CCCTCTTCAA CTCTTACGAT ATCCTCTTCC
TCCACGCTGA CGCTGTTCAC CCACTTTCTC AACTCTTCAA TCTTTTCCTT GTCCACTCCG
TATTGTTTAT ACAATGGCGC A
 
Protein sequence
MLSTMTIAIL HARFYLSSYN LSYKHRWNTT SSKQPTMQDK PLSAQRITEE RAFIKRYTES 
LADYTVQYPA DFSAPLHERP RKVPAIAIPV ADPPSADAMD VDSPSKDTVI SLTVKSLKPS
LTIPVTAQLT DTVSDLKTII SKSSASAPAP DAQRLLLKGK ALTDTKLLKE YALESGATVH
LIIKAPSATP SSAPTPSIST SDATIPPPSS VAPHPPALTI TTSVDESSEA GTSMPLTLAD
QVAPPLGPQP EVSSATFHHT ISDPTFWQKI HALCVSEFDN EQEANSAWET FLVSMKGGLS
AGEAAKIRDV VGVWGMGGQ