| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02110 |
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| Symbol | |
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| ID | 3259049 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | + |
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| Start bp | 535018 |
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| End bp | 536895 |
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| Gene Length | 1878 bp |
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| Protein Length | 475 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638258276 |
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| Product | histone deacetylation-related protein, putative |
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| Protein accession | XP_572385 |
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| Protein GI | 58270458 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.225497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTTACTCTG GCCTGAAAAC ATCCTCAAAT ATTCAGCGGA CCACAAAAAG ATCAACAAAA
ACCTTGCGGT CCGATTCCCA AGCATGACTC TCACGGACTA CCCAACATTC TCAAGTAGCC
CTTTCTTTTA CGATCCCCGG AATCCTGTAT TACCTGAAGC AGAGCAAGGC CACATTCGAG
TGAGACTTAC CGCATGCTGT TGACAAACGA ATTCGCTGAA ATGAATACCA GGCCCATTCA
AATCCATCGG TCGCCTATTA CCATCCTAAA AATGTCGGAA ACTACCATTA TGGGGTGAGA
CCATCCGTCT GAAGCTTTGT AAGAATTTGA CTAATGTATC AAACTCAATA GGAACGTCAT
CCTATGCGAC CGCATCGACT GGAGTTGACA AACCAACTCG TACTCAGTTA TGGCTTACAC
GAAAAGATGT CGTACCATGC ACCTCGTGCG GCTACAGAAG AGGAGTTACT GGAATTTCAC
GAAGCAGACT ATGTCGACTT TCTCAAGCGG TATGTGAAAC ACCCGCAACG TATCTCATGC
ACTAACATCC TTCGCACATC AGAGTCACGC CAAAAAATGC TCAAGCACTA ACAAAAGACT
GGACGAAATT CAATGTCGGT GACGATTGCC CCATCTTCTA CGATTTATTT TCTTTCTGCA
AACAGTATGC GGGTGGTTCA CTCGCCGCCG CTAGAAAACT TTCAAGTGGA AGTGCGGACA
TTGCTATCAA CTGGAGCGGT GGATTACATC ACGCAAAGAA AGGTGAAGCA AGTGGATTCT
GTTATATAAA CGATATCGTT TTGGGTATCC TTGAGCTTTT AAGGTGAATC CAATTGTTCG
TAGCGTAGTT CACCAGCTGA CGTGATTGTA GATATCATCC TCGTGTGCTC TACATTGATA
TCGACATTCA CCACGGTGAT GGAGTGCAAG AAGCATTTTA TCTCTCCAAC CGTGTTCTCA
CCGTTTCCTT CCACAAATAC GCTGCCGATT TCTTCCCTAA CACCGGTAAT TTATCAGAAA
TTGGCTCCGA TCTGGGCAAA TATTTCTGTC TCAATGTCCC TTTGCAAGAT GGCATCGACG
ATGAATCCTA CATATCACTG TTTAAAGCGG TGATGGAACC AACTATCACT ATATTCAAGC
CTTCGGCAAT TGTCCTACAG TGCGGTGCGG ATTCTCTAGG ATGCGATAGA TTGGGAACAT
TTAACCTCTC TATCGCCGCC CATGGAGAAT GCGTTAGATT TATCAAATCC TTTGGACTTC
CTCTGCTGGC TCTTGGTGGA GGCGGTTATC GTCAGTCGTC TGTGTCTCGT TGTTGGACAT
ACGAGACTGG TGTTCTCGCC GGTGTCCAAC TATCGAACGA ACTCCCGCAG AACAACTATT
ACGAATTCTT CGCCCCAGAT TACAAGCTCC ATCCTCCGTT GACAGGTAAA ATTCAAAACC
TCAATACTGC CAAGTCGCTT GAACGCATCA GAATATCCAT CCGCGAAAAA CTCAGATACC
TCGGAGGGGC TCCTAGCGTC CAAATGCAGG AGATTCCTCC CGATCTACAA GGGTTACTGG
AGGAAGACGA AAAGTCGGCT GCCGAAAAGA TGGATGAGAA AGAAGAGGAG AGGAGGGAAG
GAAAAGGCAA GGAAATAGAT TGGCTGGATA GAGAAGTTGG TGGTAGTGGT GATGGGGTCG
GTTCAGGGAG GTATTTCGGT GGCGCGAGAA GAAGATTTTA GAATATCCCA ACCAATTATT
TGCTGGTCAT ATTCCATACC CAGCATCACC TAAAAGTACC CCATATAAGG ATTCACGGCT
TTCTAGGATT GTGCTAAATA TAAATAATGT TGTATTGTTG CTGTTGTACG GTAATGAGCC
GAAAGCGATG AGCCCAAA
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| Protein sequence | MTLTDYPTFS SSPFFYDPRN PVLPEAEQGH IRAHSNPSVA YYHPKNVGNY HYGERHPMRP
HRLELTNQLV LSYGLHEKMS YHAPRAATEE ELLEFHEADY VDFLKRVTPK NAQALTKDWT
KFNVGDDCPI FYDLFSFCKQ YAGGSLAAAR KLSSGSADIA INWSGGLHHA KKGEASGFCY
INDIVLGILE LLRYHPRVLY IDIDIHHGDG VQEAFYLSNR VLTVSFHKYA ADFFPNTGNL
SEIGSDLGKY FCLNVPLQDG IDDESYISLF KAVMEPTITI FKPSAIVLQC GADSLGCDRL
GTFNLSIAAH GECVRFIKSF GLPLLALGGG GYRQSSVSRC WTYETGVLAG VQLSNELPQN
NYYEFFAPDY KLHPPLTGKI QNLNTAKSLE RIRISIREKL RYLGGAPSVQ MQEIPPDLQG
LLEEDEKSAA EKMDEKEEER REGKGKEIDW LDREVGGSGD GVGSGRYFGG ARRRF
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