Gene CNH02040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH02040 
Symbol 
ID3259208 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp556812 
End bp558196 
Gene Length1385 bp 
Protein Length266 aa 
Translation table 
GC content54% 
IMG OID638258283 
Productribosomal protein L4, putative 
Protein accessionXP_572378 
Protein GI58270444 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1358] Ribosomal protein HS6-type (S12/L30/L7a) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.637781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACCCACAA AAACTTCAAA AATGGTGCGC ATTCAACCAT TCTCAACAGG CATCACCAAG 
GAGAACTAGA CAGCGCCAAC CATCAAGGCA TACACTAGAT GGATTTGGGG ACGTCGGTGG
CTGGCGCACT TGTGTTTCCC ACGAGAAGCT CTGGTAACCG CCCCCAAACG TGCGAGAAGG
AGCAATGCCT AGGGGCAGCG CGATGATTTC TCGGCAATAT GCCTGACCCA CCTGGGTGAT
CTCTCGCAAG AGACGATCTC TAGAGCTCCG ACGTGATGCC TCGAAATTAG TAGAGGTTCA
TCGCTGACGT CGTCTCAATG ACCCATTTAT AGGCCCCCAA AGGAAAGAAG CCCGCTGCTG
CTCCCTGTGA GTGTGTTCCT GTCTGTCTCT GTAGCTTGTC CTGACTCTTT CTCTAGTCGG
CACCAAGAAG GCTGGTAAGA AGGTCCAGAA CCCTCTCTTC GAGAAGAGGT CCAAGACCTT
TGGTATCGGT TAGTAAAATT TATTGTCAGT ATTTGGAGTT GTTGCCAATG CCTGTTATAG
GTGGCGACCT TCCTCCCAAG AGGGACCTCA CTCGATTCGT CAAGTGGCCC GAGTACGTTC
GTCTCCAGAG GCAGAAGGTC ATCCTCAACC AGCGATTGAA GGTTTGTCAT TTTTTTTGGC
GTCTTAATCC GTGATTTAGC TGACTCCCCC TCTAGGTCCC CCCTGCCATC GCCCAGTTCT
CCAACACCCT CGACAAGAAC ACCGCCACTC AGCTCTTCCA GCTCCTCAAC AAGTACAAGC
CTGAGTCTAC CCAAGAGAAG AAGGCTCGTC TCCTTGCGGA GGCCGAGAAG CGAGAGAAGG
AGGGTGACAA GGCCACCACC GCCGACACTA AGAAGCCCAT CTTCGCCAAG TACGGTCTCA
ACCACGTTGT TGCCCTCGTC GAGGCCAAGA AGGCTCAGCT CGTCGTCATT GCCGACGATG
TTGACCCTAT TGAGCTCGTC GTCTTCCTCC CCGCTCTCTG CAGGAAGATG GGTGTCCCTT
ACGTTATCGT CAAGGGCAAG GCCAGGCTCG GTTTGGTGAC CGGCAAGAAG ACTGCCGCCA
CCGTCGCTAT CACCGAAGTC AGGTCCGAGG ACCAGCAGGC TCTTGCTACC CTCGTCTCTG
CCGCCAAGGC CAACTTCCTC GAGAAGTACG AGGACCACAG GCGACACTGG GGTGGTGGTG
TCCGAGGCAA CAAGTCTATC AACAAGCTCA AGAAGAGGGC TAAGGCTCTC GGTCAGGATG
CCAAGAAGAT CGACCTTTCT CTTTAAGAGA AGGCGAGGGT TGGGTGTTTG GGTAGTTTTA
TCTAGGCACT GCATGTATGA TAGTGGCTAT CCCGGGCTAT TCGTTGCATC TATGTTGTCG
TTTCT
 
Protein sequence
MAPKGKKPAA APFGTKKAGK KVQNPLFEKR SKTFGIGGDL PPKRDLTRFV KWPEYVRLQR 
QKVILNQRLK VPPAIAQFSN TLDKNTATQL FQLLNKYKPE STQEKKARLL AEAEKREKEG
DKATTADTKK PIFAKYGLNH VVALVEAKKA QLVVIADDVD PIELVVFLPA LCRKMGVPYV
IVKGKARLGL VTGKKTAATV AITEVRSEDQ QALATLVSAA KANFLEKYED HRRHWGGGVR
GNKSINKLKK RAKALGQDAK KIDLSL