Gene CNH01890 details

Gene Information

• Locus tag: CNH01890
• ID: 3259245
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: -
• Start bp: 587815
• End bp: 592894
• Gene Length: 5080 bp
• Protein Length: 1218 aa
• GC content: 47%
• IMG OID: 638258299
• Product: conserved hypothetical protein
• Protein accession: XP_572364
• Protein GI: 58270416

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGCCCACAAC ACGGTAAATC GTCCCTCAGC CATGTCCTTC CAAGAAACAA ATACTCCACC 
GCCACCCGCT ATTACAATCA GCTCCTCAAA TGCCCCTCAC TCAGAACAGC CCATGCCATC 
TACACCCCCC TCTCCTCTGA GATCGACATC CTCCTCCTCG GGAGAAAAGA GAGAATCAAA 
TGATATTACA ACACCAAGGA AACGCAGAGG GAGTCATAGC CACGTCCGAA TAAACGACGA 
CCCAGAAATA ACTATCAGCA ATGCAGACGG AGAGCCTAGT GGAAGTGGCC ATCGAAAACA 
AGCCTCTTTT GCCTTGACCG CCGATGATGA GGCGGACAGG CATAATGCAG AGAAAAAAGA 
AACGGCGGAT GACGACCAAG TCAATGAGAA GACTAGGTAC GAAAAGGTCA AAATACTAGC 
AGAATTGAGG GTGAAGAAAA TCCTGGGACA TCGGTGGTTT TCCTGGATTG GACCCAAGTT 
GACATGGGGG AAACTGAAAC CTGTGATCAG ATGTGCCATT TCCGTAAGTA TACCTCAGAA 
CATTATGTCA AATCTCATGT CCTGAATTTG TCGTTCACCT GTTGAAGGCG TGGCTAGGTC 
TTGTCCTCCT GATGATCGTC CCCGTTGAGA GGTCCATCGG CAATGGCGCA TGTAAGTGAT 
CCCAGGTCTC ATTGATCCAT AGTAGACAAT ACATCTAACA ATAACATGCA GTTTTCCTCT 
TGATTGTCAG CTTCATGCTA CCGCCAAGTG ACCCCGTGGT CCAGACATTG GAGAAGTATG 
TAAATCTATT CTTCTTCACC TCGCTGTCAT GGGTTTGGGT ACGTCTAGAA TTCCTCTTTC 
ATGAAGTAAC CAGTGGTTAA CCTCCCCATA TAGGTGATTA TTACAGTGCT CATTGCTGGT 
GCCACGAGAG GTCCTCCCAA CCCCGATAAG GTTGCCGCGG CCGAAGCAAG GTGGGCGTAT 
CTGAAAGATG TCGACCCTAC CAAATACCAG CAAAGAATTG TGAGAAGATT TTTACGCATC 
TGACGTTGCG TTTCACCCTG CTGACCATCT CTAGATTTTT GATGGTACTT ATCTCCAAGC 
GAAGCCAGCT GTGGTATGCT GCGTTTTCTT ATCTGCGGGA ACGGGCGCTC TTGTAAGCGT 
TTTTGGATTT CAGACATACC AATCAAACTG ATCATTTCAT TCGCAGCTTT GGTGGAAATT 
GAGAACGCAA CCCAGCCCAG CCACATTCCC ATTGGTCCTA TCCTGCATTC TCATTGACGT 
TAGCCTTACA GTTGTCGTGT TCTATCCTTA CAACTCTTAT ACTTCCGGCC TCATCTTCTT 
CCTACCGATG TCCGTACAAG CTGGCATTGG CACTCTTTGC TCGTTTCTCA TTTTTCCCGA 
ATCAGTGGGC CACTCATTCC AGTCCAAGTT TCCAGGAATC CTTACACCAC TCGCTTCTGC 
CATGAAGTCT ATTGAAACTC TTTTCGGCGA GGCCGAAAAG CATGATAACG GACAAGAGGA 
GAACACTGAC GATCTGCTAT CAGTAAGAAA TAGCGATTAC GGACCAAAAT TCTATGCGGA 
CAAGCTTGAT GATTGGGCGG ACAGGAGCAA GAAGATTCGC ACTCAGCTTC TCCAGTCTTT 
GGCCGGAATT CCGCCCTTGA GAGCTCAACA ACGATACCTA GCGGTAGATA TTAGTTACAG 
CCGTTTATCC GGAGAAGATT TGCGCAATCT CTTTGATCGA TTGGCCATTG TGCAGGCGCG 
TTCAGGGGGA ATGGCTTTCT TCTTTGATGT CATTATCAAC AATGCCAAAC ACTCACATCT 
GGATTCGTCT GCGTGGTCAG TCCATCACGT TTCTCAATCT CGTTCGGGTT CTCGCGCTGC 
TTCTATCAGG CATGAGTTTT TGGATGAGAG AAGAGGAAGT GTGGATGATA GCTTGCATGG 
CGATGGGACT GTCACACCTC CCCCCGAAGT CGATGATCAC GCAGAGAGTC CTCATCATGA 
CCGTGGGTTG TATTTTGGTT CCCGAAAGTT CAATTTTTCC GGCATCTTGA GGAGAAATGG 
TTCACCTCAT GGGTTCGCCG CGACGCAAAA AGGAAGCCAT CTCTCCCTGC TCGATCACCT 
CAGAAAATCA CAACAACCTG TAGGTGTGTA CGAAAGTACT AGATACATGG ACATTGAGCG 
AAACTTTGCT GTGTAGGTAC CGTATCGCTC ATTCCATGAA CAATTGCTGA TTGAACTCTT 
TGCAGAGACA CCGAGCATGT GTTGGAACAG CTTGATATCC TTGCACGAGG CAGTGTTCCT 
TTAATTCGCG CTTGTGAAGC TGCTCTTTCA GAAGCAACAG ATTGGATTCT CAATGTCAAT 
CGAGATCGAT CAATCTTTAC CTGGCCCAAT CGGCATCGCG AATCACAGAA GGAGAAAAGG 
AGGGACGAAA AGGTTATCGC CACCACCAAG CTTGAAGAGG TCACTGGACA TCTACAAAGT 
GCCTTGGACG ACTTCCATAT TGCCCGCTTG GAAATTGTTA AGCCGTATAA ACATCTTTTT 
GACCCCACTC ACCCCGAGGA AGGACGTCGT GGCAAGGTGA ATCCTCATGT CTGTACGCTG 
TACCTTAAAT TGCTGATCGA CATGGCTTGC AGATGCACTT CCGAAGCCTG TTCCAGAACT 
TTGTCGCTCA GTATCATGTT TTAGAATTCT CAGAGGCACT CCTAAATTTA CTCAGGCTCA 
TGGAAGAGTT AGACAAGTCA CGTCAAAAGC GAAGGTTATG GTATCCCCAT TTGACTTCGA 
TGATCGATCA TTTCCGTCAT TCTCACAAGG ACAAGCATTT GACTGATGGT GACGATGGGC 
ATGAGAATGA TGGTGAGTTG ACTCCCTACA ACTCGCTTGA CCGGCAAATT GATGCTTTTT 
TTGCATAGCT GCGTTTGAAC AGGAGGAAGA GGAGGATTTC TTGGGCGAAG TCAAAAAGCG 
AAACCCAGAG TACAAGCCTT TCGACAACTC ATTCCTCAAC CTCATCGCCA AGTGCTCAAA 
GGTTATGGAT ATTCTTAGCA GCAGAAGTTT CATGTATGCT TTGAAGGCAG CCGTGCTGGG 
TGCTTTGACA ACTCTGCCGA ACTTCATCGC GTGAGTCGAA CCGTCTTCGA CTTACAATTT 
GAGCGAAGGC TGAAAGGAGG TAGATCCTCT GCTTCGTTCT ATTACCTCAA CCGTGGTGTA 
TGGTGTACCA TCATGTAAGT TACCTTTATC TGGCAAGGTC CCCATTAATG CCAATTACCT 
TAGGGCTCAA CTGAGTGCGT AGCCGCCATG AATGATCCCT TGGAATTAGT CGCTAACCTA 
GTGAATTACC ATATCAGCCC TGGCAGTATA TTCAGTACGT ATCTACATCA CTGCTAATAG 
GTGGTGTGTC AGACTAATTA TGACCAATTA GGGCGATACT GCTTCTGCTT GGCTAGGTCG 
TGTTGTGGCC TCCTTCTGGG GATGCCTAGT CGGCATGGTC CTTTGGTAGG TGCTGTCCTA 
TGCAGAAAGC CCATCCTAGT TGGCTATTTC AATTGACAAC AGACTGATAC ATTCTGGGAC 
AATAGGTATA TTGGCAGCGG TTCGGGGCAA GGCAATCCCG TTAGTATACC ATTGTTACTA 
ATCTGCATAT AACTGACCGA CTTTTTATAG TATGGAATTG CTGCTGCGTG TGCAGTTGCT 
TTTCCCTTAG CGTCATTCTT TAGGATATAC TTCCCGGGGC CAGTATTAAC GGCTGTCATG 
GCCCCTGTAA CAATGGGCCT AGTTATTGGA TACGTAAGCT CGATTTCTGA CTGCTTGATT 
CAAACCCGGT TGACTTGTAT AACAGTCATA CTATAACGGG ACTATAGGGC CCCTCACCTA 
TGCACAGTGG GGTTGGGACG TTGCTTGGCG TCGTTACGTC TGCGTTCTTA TTGGAATATC 
TGCAGCCTGG GCGTTTTCGT ATGGTATGTG TCGAATATTC TCTGCGACAG AAGTGTAGCA 
GCTAATGATT GTAACAGTGC CTCCAGTGTA CTCTGCCAAG CGCGCCATTC GTTATTCATA 
CGCAAGAACA ATTGGCACTG CTGGTTCTAT TTTATGCGAC GTTCTTTCTC ATGCAAATGA 
CCATCATTAT CACCTCAAGG AAAATGACAC GATTCGCCAC AACCTTATCA CTTGGAGATC 
TAAATTGAAT AAGGTAAAGT TAAGAAATTT TGGGGGGGGG ATGACATCTA ACTCAGACGC 
CACTGCAGTT GGGCGCGAGG CATATCAATG CGACACGAGA ATTTTCATTG AGAGGTCGAT 
GGCCCGAGGA AAGGTATAAG GTAAGTTGGT ACTTCCAGAC AATCGGACGC ATCCTCACGA 
ATGTCTTGTG TCGGCCAGGC TCTTTTCGAT ACTTTGCAGG ACCTTTTATC TCTTCTATCA 
CAACTTAATC ATGTCCTCAC ACAGCTTGAG CGGCCATGGC GTAAAGCGTT GCTGGATAGG 
ACTCGCTTAT CCGATCCCGC TTTCCTCGGC GACGTGATGG TAGTCTTGAG CATGTGTTCC 
ACAGCGTTGA GAGCGGGAAC ACCTCTACCT CAAATCACCC CGAGCCCTCT AGTCGCAAGA 
TTCGTGAGAG CTATCCAGCA AGACAAGTGC AAATCATAGT GCTCACAAGT TAACAGGGAA 
TGGGCAAGAC CAAAGGACTG GATTTACCCC ACGATTCGAG TGATCAATCT GGCGAGCTTC 
CTACCCTGGT GACAGTAGAT GGTGAGTGGC TTGTGGATCT TATGTCGACA AAAGCATTTG 
AGCTGAATGG CAATGGCGCG ACAGTACTTG AATCCGATAA TTACATGCGT TACGCTCTTG 
GTATAACTAC TACCTTCTCT CTTATCTCTC GACTTGACAG AATAGTTGTC ATCTGCAAAA 
CGTAGGATGT TCCTCTCCAT GCTGTCACTT AACCATTCCG AAGGCTGACC TCGAGGCTGT 
ATATCAGATT ATTGGGTGAA AATTATCATA TTGCTGGTTT ACATTTGGAA CAAACAACTA 
GGGCATAGCG CATCTTTTGA AAGGGCCATT TTGTTTAACA TCGTGTGCTG TACATTAGCA 
TCCATCTATA TTGCGAGTTC GGCATTTGGA ACAACAGGTT 

 

Protein sequence

MSFQETNTPP PPAITISSSN APHSEQPMPS TPPSPLRSTS SSSGEKRESN DITTPRKRRG 
SHSHVRINDD PEITISNADG EPSGSGHRKQ ASFALTADDE ADRHNAEKKE TADDDQVNEK 
TRYEKVKILA ELRVKKILGH RWFSWIGPKL TWGKLKPVIR CAISAWLGLV LLMIVPVERS 
IGNGAFFLLI VSFMLPPSDP VVQTLEKYVN LFFFTSLSWV WVIITVLIAG ATRGPPNPDK 
VAAAEARWAY LKDVDPTKYQ QRIIFDGTYL QAKPAVVCCV FLSAGTGALL WWKLRTQPSP 
ATFPLVLSCI LIDVSLTVVV FYPYNSYTSG LIFFLPMSVQ AGIGTLCSFL IFPESVGHSF 
QSKFPGILTP LASAMKSIET LFGEAEKHDN GQEENTDDLL SVRNSDYGPK FYADKLDDWA 
DRSKKIRTQL LQSLAGIPPL RAQQRYLAVD ISYSRLSGED LRNLFDRLAI VQARSGGMAF 
FFDVIINNAK HSHLDSSAWS VHHVSQSRSG SRAASIRHEF LDERRGSVDD SLHGDGTVTP 
PPEVDDHAES PHHDRGLYFG SRKFNFSGIL RRNGSPHGFA ATQKGSHLSL LDHLRKSQQP 
VGVYESTRYM DIERNFAVDT EHVLEQLDIL ARGSVPLIRA CEAALSEATD WILNVNRDRS 
IFTWPNRHRE SQKEKRRDEK VIATTKLEEV TGHLQSALDD FHIARLEIVK PYKHLFDPTH 
PEEGRRGKMH FRSLFQNFVA QYHVLEFSEA LLNLLRLMEE LDKSRQKRRL WYPHLTSMID 
HFRHSHKDKH LTDGDDGHEN DAAFEQEEEE DFLGEVKKRN PEYKPFDNSF LNLIAKCSKV 
MDILSSRSFM YALKAAVLGA LTTLPNFIAA QLSRVVASFW GCLVGMVLWY IGSGSGQGNP 
YGIAAACAVA FPLASFFRIY FPGPVLTAVM APVTMGLVIG YSYYNGTIGP LTYAQWGWDV 
AWRRYVCVLI GISAAWAFSY VPPVYSAKRA IRYSYARTIG TAGSILCDVL SHANDHHYHL 
KENDTIRHNL ITWRSKLNKL GARHINATRE FSLRGRWPEE RYKALFDTLQ DLLSLLSQLN 
HVLTQLERPW RKALLDRTRL SDPAFLGDVM VVLSMCSTAL RAGTPLPQIT PSPLVARFGM 
GKTKGLDLPH DSSDQSGELP TLVTVDVLES DNYMRYALGI TTTFSLISRL DRIVVICKTL 
LGENYHIAGL HLEQTTRA