Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH01780 |
Symbol | |
ID | 3259212 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | - |
Start bp | 620528 |
End bp | 627721 |
Gene Length | 7194 bp |
Protein Length | 2245 aa |
Translation table | |
GC content | 49% |
IMG OID | 638258310 |
Product | hypothetical protein |
Protein accession | XP_572352 |
Protein GI | 58270392 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTTG ATTTCAGCTT CGTCAACCGC AAGCCTCCAA AATTCACCGT TCTTTACTGC TCCAGTTTCG ACCGCCTGCC ACCGCTTTTT TCATCCGGCA TCAACCATAC ATGGTGGCAG GATATGTCCT CTGATAATCC ACGTCCGGAG GACGTCGAAA CCCTCCTCGC TGCAAGGCGC AGAGTTCAGG AGAAACCAAA TACGGACGCC CTTCTTCCGG TCTACTTGTA CTTGTTACCC CAATCGAATG AGGCGTCGTC TGGCTCCAGC CCTTTGGAGG ACCACTGGTA CTGCAGCAGG TCCAAGTCCA CTCTCCACAT TGAGGCCGCC ACATATCTTA TATTCCTCTT TGCCTTCCAG CGTCAGGGCA CTTCAAAGAC TTGGGTTGAC AAACTAGAGG TCGTTCTCGA ATCATGCGAG AACTGTGCTA GGAGCTTTGG GGTCGCGAGG AGACGTTTAG AATCTAGGTG GGTATCTATT GCTTCTCGAA ATCATCTTTG TCTAATTGTA AATTAGATAC CTCTCTGAAT GGCCAGCACA TGTTCGGAAG AATTTCTTTG CCGCTGTTGA TAAGTGGCAA AGCACTTTCA TTCTCAACCA TTCCGATAAA GCCAGTGACA GAGGGTATGG AAAGCCAAGT TCCACTGAAC CTGCGCTCTA CTCTCTCAGT CAGCCTATAG TTCAGTTGTT ATTGGGTGAA CCGTCGCTGT TATCTGATCC TGGCGTCAAC AGCTTATATC AAGACGCCTT TCAATCGACA CTTCCTGCGC CAACATCACT TACCGCTCTT GGAATGACCC CTATACATGC TCGGCTACTT TCCTCCTCGG AGCCTGCGCA AAATCGTTGG TCTGCAGCCC AACTGCCGGC TCTTGCCCGT CGGCCAATTC GGTTCTCAGA ATGGTGCAAT TTAGGAATCG GGAGCGAGAT CCAAGATTTG TATAATGATG GGGCGCTCGA TGGAGAAAAA CGGTGGCAAA ATGTTGCAGC AATTCTGAAT AATAAGGTTC TCGACCAAGA AACTGTTGAA AAAGGCCTTT TGGGTGGCCA GCTGGAAACT GACTCGCGAG GGAGAAAGGG GAGAGGAGTG ATGTCTGTGC TGAGTGGCCT TTTGAGTAGT GACATTCCTT GTAAGTATCG TGTCACTGAA TAGGAGCTTT GTTCCTAATT GCATTTAGAT CTGGAATCCG TCATTTCCTG CCTTGCTACT CTTCTGCACA CTTCACCGAC GCGATACATA TGGTCATTCG ATACTTCCCC CGATCTTCCG CATACCCTTA TATCAGAGCT TCGAACAAAT CCGGCATTCA ACGAACTTCT CGAAACCCGT TATCCCTCAC CGCTCGATTC CGAAGCTGAC GGCCATAGTG CTCATGGCAA TGGCAGCAAC AAGAGCAAAG GGCGACGGAA GCCGGATACA AACCCATTGG ATTGGTTAGG GGACTATCTG TTGTCTGTAG CAGACACAGA GAAAGGATTG GTCACTCAAG TTGGTGAAGA GAAAGGATCT GGAATGGCAT TTGCCGAGGC TCTTGCAGTA ACCACCAATA TGGTCTTCCA AGAGCTCCAG CACGGTAGGC TTTCAAACGA ATTACGTGCT ACAGCGGCTT CCGCTGGATT TGAGGTTCGT GATGTTCACT GTTCCATCAA CGCCACGTTA ATAACATGCA TAACAGGCAA TCCTTCGAGT TTATCAGACA CTGATTGCAG AAGACGTGTC CGTGAATACC GCCATCTCCT CCACACTAGA CCTTCACTCC TCGTTTATCA CAACCGTCGC TTTCCGCTCG AAGAACCATC CCCTTCCTGC ATGGTGTGAA GCCCGTAGTT CTGCTCGTGC TCTCCTCACC ACTATTTTCC AAGCAGACGC TCGATCTACA ATTCATAGTT TATTAACAAT GGCGGCGGTC GCCCACGAAG AAAGAAAACG TCAACAGAAG AAGAGAAGAA CCAAGTCCGA TGTTGCTGTT GGTCCTGCCA AAAAGGTTGA CCATCTACCA CTTGCATCCG TGCGAAAAGA TTTGTGGTCC ATGGCTTACG ATGCGCTGTC ACCCAACGAT GCTGCGGGTG CTGCTATCCT GCTCAAATCT CTCGCACCCT TCTCGCATAT TGAATTACTT GACAGGCAAG CTTCGTGGTA TCACCATGGT CTAGAAGAAG CAGTAAAAAA GGAAGACTGG GTTGCGGCAA TAAGAGCAAT CAATACTGCC ATCAAAGCTA CACGTGAATC TTTCCCTCGC GCTATCGAAT CTTTGGCCAG TCAAGCAGAT CCTTCCGGTG TCAGATCATT ATGGAAGGAG CAAGGAGTAG CCAAAGCTGC GACCATCCTT CTCCTGTCTC CCGACGATGA AATCCATACG CCTATCATCA GTATCATTCA GCAATCTTTT GATGACGTCG ACGATCGAGG GGACTGTTTC CGTGCTCTCC TCCAGCACTA TCCTGATACA GCTGTAGATG GGCTCAATGA CTTTTTGCGT ACTTTCATTG AAACTGCAAG GATCACCCCA GAATCATGTT CTTTAGCGAA ATGGCTTGTT CGTTGCTTTC ACGATGTGCT TGAAGTCCTC TGCCGACCAT CAGGGGTATT AGGACCGCTT CTCCAATCAG ACGATTTCCT TACTTCCTTT GCAGACGGTA GAAGCATGCG AAAGAGATTG GAAGAGCTTT GGCATCTGAT GACGACGTCT CTTGCGCTCA TCTTCAAACG TACCCTTGAT TGGGCGCCTC ATTTCGAGAA CGAGGTAATG GTAGACTGGA TGCGGGACGC GCTTATCTTT GGCCGACAAA TGACTGACCA TATTAGAGCT TTTGAGGCAG CAGTTTTGGG ATCGAGTGCA AGAGGTAGTG AGACCATGTC AGAGTCTTCG GCAAGACAAA GTCTAGTGGG GAAAAAGATG ACGAAGCAAT TAGAATTGGT GTTGTCGGAT CTTATCTTAT GGCTCAGACT GACCGAGTAA GTCAGGCTTT ATGGGAGCCA CGGCATACCC GCTAACATTG TTATATAGTA TTGAAACATT GTTTCAGACA CATCAACTAA TCAAAACCAT CCTGGGAAGG ATCAGCAAGA GCACGACAGA CGTTTCCAAA AACCCCACCC TTGAGAAGAC CTTGCTTGAT ATTGATAAAT TCTGTCGCAA AGGCTCTCGA AGTTTTACAA GTCGGCTCTC TGATGACTTG CTTTCCGAGC TTTCTGATCT TCTCGAACCG TTTAATCTGG TCGATGATTC CGAAGTGCAG TTTGTCAAAG AAGTCAAGCC GAAGTCGTCA TCAGATGTCG GTACCTCGCG CGAGTCTACT TCGAATATCA GCACGCCCTC GACGTCTAAA GCTCCAGTTC GCAATGCGTT CACTGAGATG ATGAAAGCGT CAGGTGGTAA ACTGGCATCT AGCAGCAAAA CATCAACGTC GACTGCGAAA TCAAAACTAC CTACGCCCAA TGACGTTGTA GACGTCGATG ACTTTGACGA CGATTTCCTC AGCAATATTT CAGCATCCGA TCTTGACCTC ATAGAGAAAC GGGCTATCCT GAAAGAATCC GCTCGTCAGG CGCCTCCGAA ACCCTCGATT CAATCGAGAC TTTCCACATC TGCCAGACCT CATATGCCCT CAAGCAAACT GCATGTCGAC CTGACGTACA AGGTGCCCCC CAAACCCGCT CCTTCTTTCC AGTCAAAGGT GATGCAGGAC ATCCGCAGAG AACATTATGC TTCCATACAT GAACGGAAAC GATTAGAAGC AGGGCAAGTC GCACCAAAGT TACCTACGGC GTCTGCTTTA GGTAGTGGAC TCGGGGCTTA TACTGGTCCT CCTAAGCCCA GAGTGGTTGA ACCTGTAGAC AGTGGCTCGA GTGCATCTGA TTCATCAGAT GACGAGAGAG CCGCGATGAA GGGTTTACTC TCTAAGCAAA AGTCACCAGC GAAACCAGTT CGGCCAGTTG TTGAGAAGAG ATCCATCAAG GTGCTAGGTG ACCCTATAGC TGAAATCCAT CGACGAAATG AAGACCGAAG AGCTAAGGCC CATGCTACCA AGATGAGGCT GAAGCCAGAC CTCAGCCCTC TTTACCGTTA CATTCTCTCA TGGGATCCTG ATCACCAAGG GCCATCACCT CCCTATGGAA CGAAATTTGC AGCAGAGCTA TCAGATATGC GCGTAGTTCC GACAACATTT GATAGTCCAA GACAGTACGA GCGCATCATG CTTCCATTGT TTTTGCAGGA GCTTTGGTCG CAGTGCGCAA ATGACCAAGT ACAAGTGGGA CCTGTCATAC CAGTAGAGGT CGCATCAAGG CAGTACGAAG ATGATTTGGT AGAAATCGAT CTCATGGTTA TCGGGGCGGG AGATTTCTAC TGTAATGACT CTGACCTTGT CACACTCCGG CAACCCAGCA ATCCCAAAGG CATCTTTGCA AAAATCATGG GATTCAAGAA ACATCCGAAA GGCTCGATGA TTAGAGCACG TATCATGTCT GCCATGGACC AAAAAGAACT TTGCGGGAAG TCCAAGTGGC AATTGCGCAA GCACGTCTCG TGAGTCACAC TTCGAGTATC TCGCTGGTGA TGTAGCTCAT ACATATCAGT CTAAGCACTT CCATTCGAGA GTTCGCTGCC TTGAAAGGTC TACCATGGTA TGAATCCAGT CTTTTGTCGG ATATTTTGGC AGGACGAAGC GCTGTCATGC CGAAATTATC GACTCAGAGA ATTGAGGATA CGATGAAGTG TTTGAGCCTG AACGAACCGC AGGCGAAGGC CGTTCTTGGG GCTTTGGAAG TCAGAGGGTT CGCACTTATC CAAGGGTATG TGGCTTGAGC TTTGAAACTC AATATAAAAG GCCTACTGAC GCAAGGAATG GTGTAGCCCT CCAGGTACAG GTAAAACAAA AACTATAAGT GGTCTGGTGG GCAAATGGAT GTCTGAACGG AGGGTACCGA TCTCAGTCGA TGGGCAACCC CCCGTCAAGC CCAAGTTGCT GGTATGCGCC CCCAGCAATG CCGCTATTGA TGAAGTCTGC AAACGACTGA TCCTCGGAGT GCCCAACCCT GACGGTGGTC AATATAATCC GAATATTGTT AGGGTGGGTA TTGACGCTTC GGTCAATATC GCCGTGAAGG ATGTGTCATT AGACAGCCTT GTCGAAGCAT TGATCAGCAA TAGTTCAGGA AGAAACGTTG GAGGGGAATA TGGGAGGATT CAAGCGGAGC TGGATGATGT CAAGCAGCAG ATCAAGGACA AGCAGGAGGC GATTAAGCTG GCTCAAGATC ATGACGAAAA GCGGAAGGTC CTGGAAGACG AATATCACGC CCTGATTACT CGCCGTACAC AGCTTGGTCA AGCATCCTCC AAAGCAAAGG ACGCTGCCAG AGACGCAACT CGCCATCTCG ACGGTGCTCG ACGTGCGGCT AGAGATCAGA TTCTGAAGGA TGCTGATATC ATCTGTGCTA CTCTCTCCGG TGCAGGCCAT GATACATTGG CCGCCCATAC CTTCGAGACA GTAATCATTG ACGAAGCTGC TCAAGCCATA GAAATGAGTT GCCTGATCCC CTTGAAATAC GGGTGTAAGC GGTGTGTCAT GGTTGGAGGT AATTTGATTT CGCATCCTGC GAGCTTGACA GGCCGCTGAC AAAATGCAGA TCCCAATCAA TTACCCCCAA CTACATTCAG TACCAACGCT GAAAAGCTTC AGTACAATAA GAGTCTGTTC GTTCGCATGA CAAAACGCGA CGCCTCTCAT GTTCAGCTAT TAAGGTAAGC AACCCAGTCA CGTTCGGGAC TGACTACTAT CATATAGCAT CCAATATCGA ATGCATCCGT TCATCTCGGA ACTTCCCTCG AAGGTGTTCT ATCATGGTCA ACTCAAGGAC GGGCCCAGTA TGGCGAAGAA GACGGCGGCT ATCTGGCATC AGCGAAACAT CTTTGGTCCA TATCGATTTT TCAATGTCGA AGGCACGGAA ATGAAAACGG GCACATCCAC CAAGAATCCT GCGGAGGCTC TTGCTGCAGT CGAACTATAT CGTCGTTTGA GCGCCGATTT CGGGACGAGG GTGAATCTCG CAATGAGGGT TGGAGTGATC TCAATGTACA GGGAACAGTT ATGGGAGTTG AAACGAAAGT TCACTGAGGC CTTTGGTTCC GCAATTTTGG AACTCGTTGA GTGAGTCGAT TGGACAGACA TTCAATGCCT ACGACTAACA TCTGTTCAAG ATTTAACACT GTCGACGGTT TCCAAGGCCA AGAGAAAGAC ATCATCATCT TGTCTTGTGT TCGGTCCGGG CCAAATCTGA GCCATATTGG TTTCCTGAAA GACACCAGGC GAATGAATGT CGCACTCACT CGTGCCAAGA GTTCGTTATT TATCTTTGGA AATGGACCTA CTTTGGAGCG AAGCGATGAA CGATGGAAGA TTATCGTCCA GGACGCAAGA GACAGAGGTT TCTTCGTCAA TGTGGGTTGT TTCCCGTGCT CCAAGGCTTT GCTAATCATG TCGCAATTGT TCCAGTATGA TTCTACTACA TTCAACACAG CATTCTTGGA GCCTCCGCCT TCAGTCAAGA AAAAGGCATC TGCCACCTCC AAATCCAAGG CTTCCCCAGG AGCATCCAAG TCTACGACCA TGCCTGACGG CTTGCTACCT CCAAAAGACC TGGCTGCTGA CATATCGACC CCTTCCAAGG TCAAGCGAGA GGCTAGCGTT GAGCTGGCTA AGGAGAAGAA GAAGAAGCGA AAGATGTCCG ATGGCTCATC ACGAGCTGAG GAATCGAATT CTAATGTAGC TGTTGCCACG AGCAAACCTA CTTCTCGATT ATCCTCTGGA TCTACCCTGC CCTCTGTAAA ACATGCCGAA GATAGCCCAC AGCCTTCCTC CTCCAAACCG CCGCTACCCA GGATACCGCG CCCTCCACAG TCGTCTACCG CCTCGAAAAT GACACGACCC CCTCCGCCGC CGCCCGAGGA TGTGCTCTTT ATCAAAAAAA AGAAAAAGGT ACGTTTTAAG CCCATATACC CCAAGCAATA CATATTAATT AGTTGTATAT GCAGCGACTC AACAAGTAAG AATTTTAGAA GCACTACACA CGCTATTCTT CATCCATCCA TTCGCATTTG TTTGCAATCT CCATCCACAA TACCATCATA TTTTCTGGCA GTAAGTATCG AAGACGTACC AGAAGTCGTT CGTCAAATTA GTACTGATGT GTGA
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Protein sequence | MSFDFSFVNR KPPKFTVLYC SSFDRLPPLF SSGINHTWWQ DMSSDNPRPE DVETLLAARR RVQEKPNTDA LLPVYLYLLP QSNEASSGSS PLEDHWYCSR SKSTLHIEAA TYLIFLFAFQ RQGTSKTWVD KLEVVLESCE NCARSFGVAR RRLESRYLSE WPAHVRKNFF AAVDKWQSTF ILNHSDKASD RGYGKPSSTE PALYSLSQPI VQLLLGEPSL LSDPGVNSLY QDAFQSTLPA PTSLTALGMT PIHARLLSSS EPAQNRWSAA QLPALARRPI RFSEWCNLGI GSEIQDLYND GALDGEKRWQ NVAAILNNKV LDQETVEKGL LGGQLETDSR GRKGRGVMSV LSGLLSSDIP YLESVISCLA TLLHTSPTRY IWSFDTSPDL PHTLISELRT NPAFNELLET RYPSPLDSEA DGHSAHGNGS NKSKGRRKPD TNPLDWLGDY LLSVADTEKG LVTQVGEEKG SGMAFAEALA VTTNMVFQEL QHGRLSNELR ATAASAGFEA ILRVYQTLIA EDVSVNTAIS STLDLHSSFI TTVAFRSKNH PLPAWCEARS SARALLTTIF QADARSTIHS LLTMAAVAHE ERKRQQKKRR TKSDVAVGPA KKVDHLPLAS VRKDLWSMAY DALSPNDAAG AAILLKSLAP FSHIELLDRQ ASWYHHGLEE AVKKEDWVAA IRAINTAIKA TRESFPRAIE SLASQADPSG VRSLWKEQGV AKAATILLLS PDDEIHTPII SIIQQSFDDV DDRGDCFRAL LQHYPDTAVD GLNDFLRTFI ETARITPESC SLAKWLVRCF HDVLEVLCRP SGVLGPLLQS DDFLTSFADG RSMRKRLEEL WHLMTTSLAL IFKRTLDWAP HFENEVMVDW MRDALIFGRQ MTDHIRAFEA AVLGSSARGS ETMSESSARQ SLVGKKMTKQ LELVLSDLIL WLRLTDIETL FQTHQLIKTI LGRISKSTTD VSKNPTLEKT LLDIDKFCRK GSRSFTSRLS DDLLSELSDL LEPFNLVDDS EVQFVKEVKP KSSSDVGTSR ESTSNISTPS TSKAPVRNAF TEMMKASGGK LASSSKTSTS TAKSKLPTPN DVVDVDDFDD DFLSNISASD LDLIEKRAIL KESARQAPPK PSIQSRLSTS ARPHMPSSKL HVDLTYKVPP KPAPSFQSKV MQDIRREHYA SIHERKRLEA GQVAPKLPTA SALGSGLGAY TGPPKPRVVE PVDSGSSASD SSDDERAAMK GLLSKQKSPA KPVRPVVEKR SIKVLGDPIA EIHRRNEDRR AKAHATKMRL KPDLSPLYRY ILSWDPDHQG PSPPYGTKFA AELSDMRVVP TTFDSPRQYE RIMLPLFLQE LWSQCANDQV QVGPVIPVEV ASRQYEDDLV EIDLMVIGAG DFYCNDSDLV TLRQPSNPKG IFAKIMGFKK HPKGSMIRAR IMSAMDQKEL CGKSKWQLRK HVSLSTSIRE FAALKGLPWY ESSLLSDILA GRSAVMPKLS TQRIEDTMKC LSLNEPQAKA VLGALEVRGF ALIQGPPGTG KTKTISGLVG KWMSERRVPI SVDGQPPVKP KLLVCAPSNA AIDEVCKRLI LGVPNPDGGQ YNPNIVRVGI DASVNIAVKD VSLDSLVEAL ISNSSGRNVG GEYGRIQAEL DDVKQQIKDK QEAIKLAQDH DEKRKVLEDE YHALITRRTQ LGQASSKAKD AARDATRHLD GARRAARDQI LKDADIICAT LSGAGHDTLA AHTFETVIID EAAQAIEMSC LIPLKYGCKR CVMVGDPNQL PPTTFSTNAE KLQYNKSLFV RMTKRDASHV QLLSIQYRMH PFISELPSKV FYHGQLKDGP SMAKKTAAIW HQRNIFGPYR FFNVEGTEMK TGTSTKNPAE ALAAVELYRR LSADFGTRVN LAMRVGVISM YREQLWELKR KFTEAFGSAI LELVEFNTVD GFQGQEKDII ILSCVRSGPN LSHIGFLKDT RRMNVALTRA KSSLFIFGNG PTLERSDERW KIIVQDARDR GFFVNVGCFP CSKALLIMSQ LFQYDSTTFN TAFLEPPPSV KKKASATSKS KASPGASKST TMPDGLLPPK DLAADISTPS KVKREASVEL AKEKKKKRKM SDGSSRAEES NSNVAVATSK PTSRLSSGST LPSVKHAEDS PQPSSSKPPL PRIPRPPQSS TASKMTRPPP PPPEDVLFIK KKKKVRFKPI YPKQYILISC ICSDSTSKNF RSTTHAILHP SIRICLQSPS TIPSYFLAVS IEDVPEVVRQ ISTDV
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