Gene CNH01570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH01570 
Symbol 
ID3259169 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp689982 
End bp692418 
Gene Length2437 bp 
Protein Length568 aa 
Translation table 
GC content47% 
IMG OID638258331 
Productconserved hypothetical protein 
Protein accessionXP_572338 
Protein GI58270364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTTCCTTGT CTACCCACCA AGCTATCCCT CTCTCCTTTC TCCTTCCCTT CCATCAATCA 
CAGCTCCGTC CCTCTGGTTC GTGTACGTTC GTATACTGTC CTTTCTATAC ACCACCACAT
ACCCGAAAAG ACATTCCTTC GATTTTGAGA TCACTATCAA CTGCCAGGGC CATCAACGAG
GATGCCTTCA CAGTCACCCT CTCCCTTTCC AGAAACATCG CTTGGCGCAT CGTCACAACC
CGTCGACTCG GCAAATAATT TGCAGTGGTC TTCCGCCCCT CCACCTCTTC CCCCTCGCCC
GCCTCCAGGT GCCCATAGAA AGCCAGTTCC TGCTTTGCGC AATGACGACC TGCATGGACA
ACCACTCCAG CGCCATTCTA TGTCTCCTCC TCCTGTACCA TCTCGACCTG CTGCCGGTAT
TGCTGCCCCT CCCGCAACCT TCACGACGGC CTATAACACC GCTGCCCAAT CTACTTTGCC
GCCTCAGCCA CCACCTCCTC GCTTAATCGA TGAGAAGAAC TCGTCTCAGC CACCTCCTGG
GAAAAGAAGA GGCTGCTATC CCTCAACAAG AAGAGGTCGG ATTTGGTTCT GGGGTCTTAT
TGCTCTCATC ATTCTCGCTA TTGTCATTGT TGTTGCTGTT TGCGCATCTG TTATACCTAA
GAACAACTCG TCTTCCGACA CAAACTCATC TTCTGACACA AACTCATCGT CTGACACAAA
TTCATCTCCT GGCAAGTCTT ACCACGGTGG ACATCCATTA TCAATTGCCG AGGGTGGCGT
TGACATTGGG CAACCTGGAG ACATTGCCGT TTTCGGGAAA AACTCTACCG ATCACTTTGT
CATGACTACC AATCGATCCA TTGTAGTCAC GAGGCTTGAC CCCGTTGTTT TCCCTGGCAG
CATTGGTGCT CATGTCCACC GCGTCCATGG ATCGTCCTAT TTTACACAAA ACCTCACTTC
GGCGACTGAG ATGCAACGAC TTGCAAACTG CACAACCACT GTCGTTCAAG ATGATCTGTC
GGCATATTGG GTGGCTGGCC TGTATTACCG TTACCCCAAT GGCTCGCTGG CGTCTGTACG
GTTGGATAGA ACTTCACTGT ATTACTTTCA GAAGGCACCT ACTGGTGTAC CCATCTATCC
ATTTCCAGAC AACTACAATA TTATTGCCGG TAACCCATAC CGTCGAGCAA TCAATTATTC
AGATCCGTGA GTTAATTTGT TTGCGGCAAA CTTGCGATAG TCAGCTAATG AATAACCAGA
ACGCATATTT CCAAATGGTT TCAGTGTTAC CGTGGAGGTG GCAATGATCT CCGTACTTAT
GGTTTCCCTA AAAGCCCGTG CTCCGACGGC TTGGTTCAGG CTATTCAATT GTAAGTATTT
TCATTGTATA GTGCTGTAAA TCCGCTGATG GTGTGCTGTT TTAGTCCCAG TTGCTGGGAT
GGGGTTTATG CCGAGGACGG TGATTATTCC ACACATGTCG GTGCGTCTTG TCAACGACAG
ACATTTTCAG TAGACTCAGA TTGATTGACT CAACTCTAGC CTACCCTATT GACAACACCA
ATGGCTACTA TTGCCCAGAC GGTGAGCAGT CATGCTACTT TAAAACGTGA CTGAGCTAAC
ATGTAGTTAG ACTTTCCGAA AAAGTTCATC ACCTTGCAGT TTGAGACAGT ATTCGCAGTC
TATGACTTCC CTTATAATGG GAATGATCAA ATCACATGGG TACTCAGCAA TGGTGATACC
TCTGGTGTAC GTCCTGTTAT CCTGTAGCCT CTGGCATTAT GGAACTAATC CCATACACAG
TACGGTATTC ATGCCGATTT TATGAATGGC TGGAAGCGTG AGTGTCTTGA TCTAGCATAT
TCTTCTTGAT TCTTATCATA TGCAGCGGAA ACACTTGAAG CCGTATTGAA CGACTGTCGA
TATATGAACG CCACCAGCGA AGATCCAAGT AAGTTGGCAC GTTTGACTGG AAAAATGATT
CCCGCTCATC CGCTGATCGA TCGCAGTCTC TGACGATCCG CCCAACTGCC CGCCTTTGAA
CAAGTCTATC AATATGGATA TCACACACAG CTGTCGTCTG CAGACGCCAA TAGTGAACGA
GGAAGTTGGG GAACATTCCT TACTTGAATA CCTACCAGGT TGCAATGCTC TCTGGTCCGG
TAACATATCC AAACCCGCGT GTCCATCTGG ACATATCGAT GGAGGAGACT TGGATCTAGT
ATCTCCTTCG GTCTGGTACC GAGAAGAACC CTATATATCA TGATCTAAAA TAAGAGTTCA
TGTGAAATGA GAAATTTCAG GAATTTAATG ACTTTACCAG ATTTATAAAT TAATTTGCTC
GGATTTATAT TTTTAGACAA GTTTAGACGA GTTATATATT TCAGTGCACT TGGCCCGGCG
CCCTTTTTGT TGTTTCTATA GTACATACAT GCCGAAT
 
Protein sequence
MPSQSPSPFP ETSLGASSQP VDSANNLQWS SAPPPLPPRP PPGAHRKPVP ALRNDDLHGQ 
PLQRHSMSPP PVPSRPAAGI AAPPATFTTA YNTAAQSTLP PQPPPPRLID EKNSSQPPPG
KRRGCYPSTR RGRIWFWGLI ALIILAIVIV VAVCASVIPK NNSSSDTNSS SDTNSSSDTN
SSPGKSYHGG HPLSIAEGGV DIGQPGDIAV FGKNSTDHFV MTTNRSIVVT RLDPVVFPGS
IGAHVHRVHG SSYFTQNLTS ATEMQRLANC TTTVVQDDLS AYWVAGLYYR YPNGSLASVR
LDRTSLYYFQ KAPTGVPIYP FPDNYNIIAG NPYRRAINYS DPTHISKWFQ CYRGGGNDLR
TYGFPKSPCS DGLVQAIQFP SCWDGVYAED GDYSTHVAYP IDNTNGYYCP DDFPKKFITL
QFETVFAVYD FPYNGNDQIT WVLSNGDTSG YGIHADFMNG WKPETLEAVL NDCRYMNATS
EDPISDDPPN CPPLNKSINM DITHSCRLQT PIVNEEVGEH SLLEYLPGCN ALWSGNISKP
ACPSGHIDGG DLDLVSPSVW YREEPYIS