| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH01520 |
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| Symbol | |
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| ID | 3258993 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | + |
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| Start bp | 703642 |
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| End bp | 706110 |
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| Gene Length | 2469 bp |
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| Protein Length | 639 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638258337 |
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| Product | 2-isopropylmalate synthase, putative |
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| Protein accession | XP_572334 |
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| Protein GI | 58270356 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0965657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGAGTATCCG TGACTCCGTT CTGTCATTTT CGTCTTCTTC ATCGCATCCC CCAACTCCAC
TTTCTCGGTC AACAACAACA GAAAAAAATA TAACAATCGA GTTTCATCGA AAACAGAGTC
AGAAATCTTT GTCACAATGC CTATGCTGTA AGTAACCCAC TGTTTTTCCA TTTGAGTTAC
TTGTCATTTT CCTAAGCAAA TTAACAATCA TTGGCAGCTC CGACCCCTCC AAGCGCTACC
TCCCCTTCCA ACCTGTCCCA TTTCCCAATC GCACTTGGCC TGACAAGACT CATAAGAAAG
CCCCTATTTG GCTTAGTACT GATCTCCGAG ACGGGAATCA AAGTCTCGCC AATCGTATGT
GGTGTTGTTT GCCATTCGGA CAAAAGTGCT AAAAGTCAAC AGCTATGACC AACCAACAGA
AGCTGCGCTT TTTCCGACAT CTTGTGCAGC TGGGTTTCAA GGAAATCGAA GTAGCTTATC
CCGCGGCATC TGAAACCGAC TATAACTTCG TCCGGGAATT GATCGATCGC AAGGAAGTCC
CAGATGATGT CTGGATTCAA GTGAGTCAAT GTAGTCCGCC GACCGAGATC AATCATTGCT
AACAGTCTGT CACAGGTACT CACCCCTGCA CGAGCAGATC TTATCAAGCG GACATTCGAA
GCCGTCGCGG GTCTTAAACA CGTTATCGTC CATATGTACA ATGCTACATC TTGTTTGTTC
CGAGAAGTGG TCTTCAACAA CGATCGAGAT GAAACAATCA AGTAGGTACT CTCTGATTTA
GTAATCACTA ACCTTGTCTA GGCTTGCTAT GGATCATACT ATTCTCATTC GCCAGCTCGC
GGAAAAATAC GCGGAGTCGC ATGGTACTAG TTTCCGCTAT GAATACTCTC CTGAAACTTT
CTCTCAAACG GAGACGCCGT ACGCTGTCGA GGTATGTGAG GCAGTGAAAA AAGCTTGGCT
TGGTGGACAT GGAAGTGTTT GGGCGGACGG TCGCAAGGAA GAGCGAATTA TCTTCAACCT
CCCAGCCACA GTTGAAGTAG CGACTCCCAA TTGCTTCGCT GATCAAGTGA GTAGACATCA
TAGATGAAAA CACTAAAAAT AGAGTTGACA CCATTTTAGG TTGAAATTTT CTGTAATTCC
ATCTCAGAGA GAGAGAAGTG CATCATCAGT CTGCACACTC ACAATGATAG AGGTATGTGG
AGCAATACCG GTATTATATG CCTGGCTTAC CTGGTCTCTC AGGCTGTGCA GTAGCTGCTG
CTGAACTAGG TGTTCTCGCT GGCGCTGATC GTATCGAAGG GACTGTGCTT GGTAATGGTG
AACGCACCGG AAATGTGGAC CTTGTTACCC TTGCTCTCAA TTGCTATTCT CAAGGCATCA
GTCCCAATCT TGACTTCTCA GACATGTTTT CTGTCATTGA CACTGTGACA GAGTGTACTG
GTCTGCCTGT GCACCCTCGC CATCCTTATG CTGGTGAACT TGTGTTCACT GCCTTCTCTG
GTAGCCATCA GGATGCCATC AAAAAAGGCT TCGAGGCCCA GGCTAAAAGG GATCATGCTG
GTGACCAGGT GTGGAGCATG CCTTATCTTC CTATTGATCC TGCAGATGTT GGTTGTACAT
ATGAGGCTGT GATCCGTGTC AACTCTCAGT CTGGCAAGGG GGGGTGAGTA GTGACCCCCA
TCAATATATT TTTGCTTACT GATCCCAAAA CACAGCATTG CCTACATTGT GAAGTCTGCA
CTCTCCCTTG ACCTTCCTCG AAGGATGCAA ATTGCCTTCT ACAAGGTTGT TCAAGAGTGT
TCTGAGGCAA CTGGAAGGGA GATGACCTCC AAAGACATTA CCACTGCTTT CCGTCAGACT
TATCACCTTG GTGGTTCTAT CTATGATGGG CGGCTTGTCC TCAAGTCTTT TGTCACAGTT
GATCTTTTCT CTTCACAAAC ACCATCAGTT GCTGGGACCC CTGACCTCTC CCCAATTCGA
TCTCGATCCC AAACACGCAT GCCTCCCCTC AGTCTTTCAA GTAGTGTGGC AGAACCTAGC
CCAGACCGAA GCCTTGATAG GAATTTGCCT TCAATGTCCA AACGTCTTAC TGCCAAGGTT
TTAGTTGATG GGAAATTGCA TGAGATTGTT GGTGAAGGTA ATGGGCCACT CTCATCATTC
CTTAATGCTC TTGAGAGTGA CCTTGGCATT GTGCTGTCTG TCCGAGAATA TACTGAGCAT
GCTGTGGGTG CTGGATCTGA TGTGAAGGCT GCAACATATG TTGAGCTTAT TCCTGCAAAT
GTGGATGCAA AGGACAAGAC TCAGGGGGGA TTCTGGGGTG TTGGTGTTGA TGCTGATATC
ACAGCAAGTG GCCTCAAAGC GGTAGTCAGT GCAGCCAATG GTTTTTTGGG TCAAGGTCCC
ATCCCATCTC AAAACAGTAT CTAGAAATAA TTGTAGCAAT CAGTTTTAAT GCATACATAT
TGTCATTGA
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| Protein sequence | MPMLSDPSKR YLPFQPVPFP NRTWPDKTHK KAPIWLSTDL RDGNQSLANP MTNQQKLRFF
RHLVQLGFKE IEVAYPAASE TDYNFVRELI DRKEVPDDVW IQVLTPARAD LIKRTFEAVA
GLKHVIVHMY NATSCLFREV VFNNDRDETI KLAMDHTILI RQLAEKYAES HGTSFRYEYS
PETFSQTETP YAVEVCEAVK KAWLGGHGSV WADGRKEERI IFNLPATVEV ATPNCFADQV
EIFCNSISER EKCIISLHTH NDRGCAVAAA ELGVLAGADR IEGTVLGNGE RTGNVDLVTL
ALNCYSQGIS PNLDFSDMFS VIDTVTECTG LPVHPRHPYA GELVFTAFSG SHQDAIKKGF
EAQAKRDHAG DQVWSMPYLP IDPADVGCTY EAVIRVNSQS GKGGIAYIVK SALSLDLPRR
MQIAFYKVVQ ECSEATGREM TSKDITTAFR QTYHLGGSIY DGRLVLKSFV TVDLFSSQTP
SVAGTPDLSP IRSRSQTRMP PLSLSSSVAE PSPDRSLDRN LPSMSKRLTA KVLVDGKLHE
IVGEGNGPLS SFLNALESDL GIVLSVREYT EHAVGAGSDV KAATYVELIP ANVDAKDKTQ
GGFWGVGVDA DITASGLKAV VSAANGFLGQ GPIPSQNSI
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