Gene CNH01500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH01500 
Symbol 
ID3259289 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp712568 
End bp713982 
Gene Length1415 bp 
Protein Length428 aa 
Translation table 
GC content48% 
IMG OID638258338 
Productconserved hypothetical protein 
Protein accessionXP_572554 
Protein GI58270796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0395313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAC GATCAGCTAA GTATAAAGCG ACAGCACGAG CCAGAGAGCT CTATCGAATG 
GCGACTATCC TCAATCATAA GCAGCTCAAG ACCAGTTTGT CCATTCCGTA TCATGCTCTC
AGGACATCTC GTTACCTCAA TCGTCCGAAG AAGTATGGTC AGCTTCGTAG TAGGGATGCT
GTTGCCAGAA TTACAAGCAT TCATGAGATA CCAGATGAGG ATTTCCGCCG CAAACTGCAT
GTCAACCATA CGGAATTTCG AAAGCTTCTC TGCCTTATCA AGGACCATCC AGTTTTCGTC
TCTCATGGTC CAAGAAAACA GGCGAACCCC CTTTTACAGC TTACAGTTGC ACTCTATCGA
CTGGGACATT GCGGATGTGC TGCGAGCACT TTTGAGATAG GAGAGCAGTT TGGGGTGTCA
GGTGAGTGCC CACGCCACAC TGCATCCAGA AACATTAAAC CGTTTCTTCG AGATTGATTG
TTATCCATCA GAGGGCACGT CGGCCATATG GACGACTCGG GTAATCAAGG CCATCCTGTC
ATTGGAGCGA AACAACGTAT ACTGGCCAGA TGAAAATGAG AGGAAGGCTA TAGACAGGCA
CTTTGAAGAG GAGGAGGACA TTCCTGATGG ATGTGTGGGG ATTATCGACG GCTTCCATGT
TCCCTTCGCT TACAAGCCTG CTCGCCATGA TGCTGTCGAT TTCTTTTCAT ACAAAGGGCG
CTACGGCTTC AATATCCTAG GAATTTGCGA CCATTTGAAG AGGATTCGGT ACTTCCAGTA
TGGTTATCCT GCTTCTGCTC ATGATGCTCG TATCTTCAAG AACTGTTCTC TCTTTGAAGA
GGCTAATGCC GACGCTCAGA GTAACAGAGA AGCCATGTTG CAAGGCCGAG CTGTTCATTC
AGAAATGATC AGTCAAGGTG AATATCTTTT GGCAGATTCG GCATTTCCTG CTGGGGATTG
GTGTGTACCG CTTTTCAAGC GTCGGAGAGG TCAGAACGAC CTTGATCGGC CAGAAGTAAG
TTTATTTGTC CGCATATCTC ATGTATAGAC CTACATGCTC ATATATACAA CAGGCCAAGT
TCAATAAGAA GTGTTCGAGT GCCCGAGTCA AGATTGAGCA TGCCTACGGA ATCCTCAAAA
ACCGCTGGCA GAGTCTTAGG AGCCTTCGCG TGAAGATTTG CAATGTCAGA GATGAAGGTG
TTGCGACATG CTGGATCCAG GCCTGTGTGG TATTGCACAA TCTGCTCATT GACACAGGTG
ATTGGTACAA TCAGCTGGAT GGTGACGCTG ATGAACCTGA TGATTACATC GACATCGAAA
GGATGCAAGA AAGGATGGAG AGGGTGTTAG AGCGGCACAG GGAAGAAGAG GAGGATGAGG
CACGTGATGC AAGAGATGCT TCAAATCTCA CGTGA
 
Protein sequence
MPRRSAKYKA TARARELYRM ATILNHKQLK TSLSIPYHAL RTSRYLNRPK KYGQLRSRDA 
VARITSIHEI PDEDFRRKLH VNHTEFRKLL CLIKDHPVFV SHGPRKQANP LLQLTVALYR
LGHCGCAAST FEIGEQFGVS EGTSAIWTTR VIKAILSLER NNVYWPDENE RKAIDRHFEE
EEDIPDGCVG IIDGFHVPFA YKPARHDAVD FFSYKGRYGF NILGICDHLK RIRYFQYGYP
ASAHDARIFK NCSLFEEANA DAQSNREAML QGRAVHSEMI SQGEYLLADS AFPAGDWCVP
LFKRRRGQND LDRPEAKFNK KCSSARVKIE HAYGILKNRW QSLRSLRVKI CNVRDEGVAT
CWIQACVVLH NLLIDTGDWY NQLDGDADEP DDYIDIERMQ ERMERVLERH REEEEDEARD
ARDASNLT