Gene CNH01390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH01390 
Symbol 
ID3259161 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp777077 
End bp781061 
Gene Length3985 bp 
Protein Length887 aa 
Translation table 
GC content46% 
IMG OID638258344 
Producthypothetical protein 
Protein accessionXP_572327 
Protein GI58270342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGCC CTTTCCCGCC AGAAAGCCAA GCGGGCGGTC CGCCAGAACG AAAATTCAGT 
GTTGACAGCG CGCAAGGAGA CCATGGTCAA CAACAACCTC AGAAGAAGAA GAGGGTCAGT
TTGAGTTGTG CTCAATGTGA GTTAGTATCT TTTAAGAAAC CCGCTCGGAC CAAACGGAAT
ATATTATATA TATATATATA TATACTTGGG CACGGTCTTT TTTTTATCTA CAACTTGAAA
TTGTATCGCG GCTAACAGTT CCGTTGAAGG TGCTAAGAGA AAGCAGAAAG TGCGTATAGG
ATGTGAAAAA TCGATGACGA CTGACCAGTC TTGTTTGTTC CATTCAGTGT AACCGCGAAT
TTCCTTGTCA GCACTGTGAG TGCCATCCAT CTTCGTCTGT TTTGATTCGC TGACATTATT
TTCCTCGTAT AACAGGTGTT GGTAGGTCCC GAGATGATCA CAAGAATGAG GAAAAGAATT
GAAACGCTGA TCATTTTTTC CTTTCCAGCC CGGAAAGTCC CCGAGTTATG CGTAAGCTGA
ATAATCACAT GATGTCAAAT CGAAGGCTAA GCCTTAACTT AGGTTCCCTA TAACCCTCAA
GCAAATAATA ACGTCAATGG GCCAGATCCA CAGACGGCGG CCAGACTAGA AAGCATCGAA
GCTGTCTTAT CTGTTGTCGT GAGACATACA GGTGGGATCA CACATTACGA TGCCATCCGC
GACTGGATTT CTTGTACGTA GCCAAATATC CTTTCCATAA CCCTGTCTCA TTTCGGAAAG
CAGCGTTGCC CTTTCAGAAA CACTTACAAT CGGCCCCATC CACCCCCGCT TCTCCCCATA
ATCTTATGAC CCATGGTAGT GTTCCAGGTC CATCTCGGGC AGGTTCCACA TACCATCTTG
ATCCCCAGGA AACAGCTCAT CTGGAGAGAG GTGGCAGTTC TGATGATGAT AATCTGGCAA
AGGTTGGGAA GGGGTGGCTG GGAGAGATTG ATGGGTTAGT TTTACTGTCA TTACACCGCA
TTACGTCGCT TATCATATAC GCAGTGGCCT TCCTGAAAAC GTACGAAATC GTGCTTGGCA
AGTGGAACAT GTACTAACAT CTTGCAGATG GAGCTCAACG AAAAGGTCAA GATGAAGTTG
GATATTCATG GAACGCCTGC TGAAAACCTT CAACGTTTGA TTACTGACTG CGGTGTCAGC
CCACACAAGA TTGCAGAACT CGTTCAGGAA CTTCCGCCGA AGCCTTTTGC CGACAGAATA
ATTGACTGGT TCTTTGCCAA ACTCAACTTC ATACGATATC CTATCGACGA AAGGATGTTT
AGAGCGTCCT ACGAGGATCT TTATAACAAG TCTACCGCTT TGGATCCATC AAATGTCAGA
GCGCTGCCTC TTGTTTTTAT TGTGCTTGCA TTGGCTGTCC GGCAGGCACC TGAAAAATGG
GCGGGAAATG AGCAAACAAG ACGACTGTCA AGTTTACGGA TGTATTGGAG TTGTGAGTCA
ACGAGCCTCT TGTAAAAGGA TTTTGACAAG CAAGTCTGAT CCGGTTCTCG CAGCCCGGCG
TAGCATCCTG ATAGCTACTG CTGTTCAATC CGAAAGCCTG GAGCTAGTCG TCAGTCGTTT
ACTGGTGAAT ACTACAATTA ATTTCCTCGC GATGTTTCCT GATTTCAAAT GCAGAGTGCC
ATGTATTTGG TACTAATCCA CGACCGCCGT CTTACAGAGT GCTGGTCTCA GCTGGGCGCT
TCTTTACGTA CGGCGCAGGC TATTGGTTTA CATCGTGATG GTTCTAAACT TGGATTAGAG
TAAGCTTCCG AGGCGTGATC TTAGACTGTT CGTGACTGAC GAGCATGTTT ACAGTCCGTT
TCAAACAGAG TACCGAAGAC GACTGTGGAG CTATCTGTAT CATGCAGATA AGCAGTACAG
TCTGGTTTTG GGACGGCCGC CGAGCATCTC TGACAGTTAT ACCGATACTC AGTAAGCCTC
GCTTCGGTTG CTAAAGCCGT TTACTGATCT GATGCATGAA AAGAACTCCA TCCAACATCG
ACCTTACCGA CTATGACCCC GCTCTCGGTT TACCACCAGC CAAGCCTTTC CACGAACCTA
CACCTGCCCT TTTCCTTATC TTACGCAAGA AGCTTGCTGT TGTCATTGGC AAAATTGTGC
ATCATTTTCA AAAGCTCAAC GAACCTGCGC AGTATTCAGA CGTGGAGAAG CTGCAACAGG
AGCTAGATCT CTTTGTTGAG CAGTTGCCTC CTCATTTCCG AATGCACGAT CCAGATAAAA
GCTTAGATAG TGGTAAGGTC AATCTAGCTG TTATTGGGGA GTACGCTAAA TGACTAAAAC
AGTTCATTTT TGGTTACCGG TTCATCGGTT TATGCTCTTG ACGGAAGTAC TGGTCACAAC
TATTATTTTG CATGTAAGCA CGAATGACGC AATTTAGCCA TCCACCGTAT TCATCACTAA
TTTCTTTTTT TTTCCTTTTT AGCGCCCGTG GTTGCTACGC AAGTTATCCA GTAACCGCTA
TGCAGCCTCC CGAACAGCAT GCTTTGAGGC TGCTAAGCTT GACTTCCAAA TCAGGTTTGC
TTGATTCAAC TCATTCTTCA TTCTGTTTTA CCGTCTGACC TTGAATCCGC AGACAAGATT
TTGAACGTGT CCCCGAGTTC AAATTATTTG CCATCACTGG TCAATTCAAA ATGTTCAATA
GCGCCATGAT CGCGGGAATA AGCGCGATCA TCGACCCTAG AGGACCAGAT TCGGACCAGA
TGAGAAAAAT ATTGACTACC TTCTTGGAGG ACAATCCTTG GCATGAAGTC GCGACCAAGG
ATGCCACCAC AAGGAAAGAA GTTCAAATCG TCTGTTTTTT TTTTTCGTAC ACTTCCAATG
GAAAAGCTGG CTGACAATAT CTCAAATAGA TCCAAACTTT GTCCAGGCGA GCTGCAAAGA
TATTTGAGGA TTCATTCGGT CCGGGCGAGC CGGCTGCGCA TGACAAAGAT AGTGCTGCTT
TGCTGTTAGC CCTTCGACAG AGCAACGATT CATCAACACA TTCCAACGCA TACCCAAGGG
GCGTCCAGCC AGAGGATACC CCAAACCCCG GAGGGTCAGG TGTAATGCAA CACAAGATGA
TGCTTCCACC TCGGGCTTGG GGTCCCCCTC CTGGAGTGTC ATTTGCACCT GTGCATCATG
GAGGAATAAA CCAAAGTCCT GCCTCAACAG GTAGTCATGA AGACGACCAC TCACAGAAGC
TGTGCGTAAT GATCTTCCAT CTTTTCCCAA TTGCTTGAGC TGACATGTTT TTTTTTTTTT
TTTTTCAGTC TTGACCATTG GATTAATGCT AATACCTCTC TTGCTGTTGG CGGCTCGTCC
AGTGGCGGGC CCCTTCCAGT TCTCGACACG TCTGGTATGG GTTATCTTCC CCTTCCTACC
ATGTCAGGTG CAATGACCCC GATTGGCCTT CCAGGTGGTC CTGCCCTCAC ACCTAATCCC
GCTTTTGCTG GTTATGGTGG TCAGGCCATT ATGGAAGAAG GCGGGAATAA CTTTATGGGG
CATCATTTAA CGGGCGAGTT TACCTATCCA AATCAGTTCG GGATGCTTGC CGTAGAAGGA
AATGGGGTCG GCGTAGGAAA CGGGAGAGCG GGACTTGATT CCGGAGTGGA GAATAGCGAC
GAGTATTGGA ACACCTTGAT TGATGGTAAG GTCGCTATTC ATTGCAATGG GACAGTTTGC
TAACTAGAAG CTTTAGGAAT TTTGGGTACG ACAGGCGGAA TGTCGGGTCC CTCACAAAGC
GGCCACGCTT AATTGGAACA AGTGTATATG GTATTTCCCA ATATATGCCT TTATATTTTC
TTCTTATTCC GGGATCCCTG ATTTGATCTG AGATTAGACG CATGTAGCAG CCGGTCATGA
AGTTATAATT ATAGTTTATA GAGACATGAG AATGCAGTCA CGACCTTTAG CATCGTAGAA
GCAATTAAAT ATTCATTCAT ACATC
 
Protein sequence
MKRPFPPESQ AGGPPERKFS VDSAQGDHGQ QQPQKKKRVL RESRNVTANF LVSTVTRKVP 
ELCVPYNPQA NNNVNGPDPQ TAARLESIEA VLSVVVRHTG GITHYDAIRD WISSLPFQKH
LQSAPSTPAS PHNLMTHGSV PGPSRAGSTY HLDPQETAHL ERGGSSDDDN LAKVGKGWLG
EIDGGLPENM ELNEKVKMKL DIHGTPAENL QRLITDCGVS PHKIAELVQE LPPKPFADRI
IDWFFAKLNF IRYPIDERMF RASYEDLYNK STALDPSNVR ALPLVFIVLA LAVRQAPEKW
AGNEQTRRLS SLRMYWSSRR SILIATAVQS ESLELVSAMY LVLIHDRRLT ECWSQLGASL
RTAQAIGLHR DGSKLGLDPF QTEYRRRLWS YLYHADKQYS LVLGRPPSIS DSYTDTQTPS
NIDLTDYDPA LGLPPAKPFH EPTPALFLIL RKKLAVVIGK IVHHFQKLNE PAQYSDVEKL
QQELDLFVEQ LPPHFRMHDP DKSLDSVHFW LPVHRFMLLT EVLVTTIILH RPWLLRKLSS
NRYAASRTAC FEAAKLDFQI RQDFERVPEF KLFAITGQFK MFNSAMIAGI SAIIDPRGPD
SDQMRKILTT FLEDNPWHEV ATKDATTRKE VQIIQTLSRR AAKIFEDSFG PGEPAAHDKD
SAALLLALRQ SNDSSTHSNA YPRGVQPEDT PNPGGSGVMQ HKMMLPPRAW GPPPGVSFAP
VHHGGINQSP ASTGSHEDDH SQKLLDHWIN ANTSLAVGGS SSGGPLPVLD TSGMGYLPLP
TMSGAMTPIG LPGGPALTPN PAFAGYGGQA IMEEGGNNFM GHHLTGEFTY PNQFGMLAVE
GNGVGVGNGR AGLDSGVENS DEYWNTLIDG ILGTTGGMSG PSQSGHA