Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH01390 |
Symbol | |
ID | 3259161 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | - |
Start bp | 777077 |
End bp | 781061 |
Gene Length | 3985 bp |
Protein Length | 887 aa |
Translation table | |
GC content | 46% |
IMG OID | 638258344 |
Product | hypothetical protein |
Protein accession | XP_572327 |
Protein GI | 58270342 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCC CTTTCCCGCC AGAAAGCCAA GCGGGCGGTC CGCCAGAACG AAAATTCAGT GTTGACAGCG CGCAAGGAGA CCATGGTCAA CAACAACCTC AGAAGAAGAA GAGGGTCAGT TTGAGTTGTG CTCAATGTGA GTTAGTATCT TTTAAGAAAC CCGCTCGGAC CAAACGGAAT ATATTATATA TATATATATA TATACTTGGG CACGGTCTTT TTTTTATCTA CAACTTGAAA TTGTATCGCG GCTAACAGTT CCGTTGAAGG TGCTAAGAGA AAGCAGAAAG TGCGTATAGG ATGTGAAAAA TCGATGACGA CTGACCAGTC TTGTTTGTTC CATTCAGTGT AACCGCGAAT TTCCTTGTCA GCACTGTGAG TGCCATCCAT CTTCGTCTGT TTTGATTCGC TGACATTATT TTCCTCGTAT AACAGGTGTT GGTAGGTCCC GAGATGATCA CAAGAATGAG GAAAAGAATT GAAACGCTGA TCATTTTTTC CTTTCCAGCC CGGAAAGTCC CCGAGTTATG CGTAAGCTGA ATAATCACAT GATGTCAAAT CGAAGGCTAA GCCTTAACTT AGGTTCCCTA TAACCCTCAA GCAAATAATA ACGTCAATGG GCCAGATCCA CAGACGGCGG CCAGACTAGA AAGCATCGAA GCTGTCTTAT CTGTTGTCGT GAGACATACA GGTGGGATCA CACATTACGA TGCCATCCGC GACTGGATTT CTTGTACGTA GCCAAATATC CTTTCCATAA CCCTGTCTCA TTTCGGAAAG CAGCGTTGCC CTTTCAGAAA CACTTACAAT CGGCCCCATC CACCCCCGCT TCTCCCCATA ATCTTATGAC CCATGGTAGT GTTCCAGGTC CATCTCGGGC AGGTTCCACA TACCATCTTG ATCCCCAGGA AACAGCTCAT CTGGAGAGAG GTGGCAGTTC TGATGATGAT AATCTGGCAA AGGTTGGGAA GGGGTGGCTG GGAGAGATTG ATGGGTTAGT TTTACTGTCA TTACACCGCA TTACGTCGCT TATCATATAC GCAGTGGCCT TCCTGAAAAC GTACGAAATC GTGCTTGGCA AGTGGAACAT GTACTAACAT CTTGCAGATG GAGCTCAACG AAAAGGTCAA GATGAAGTTG GATATTCATG GAACGCCTGC TGAAAACCTT CAACGTTTGA TTACTGACTG CGGTGTCAGC CCACACAAGA TTGCAGAACT CGTTCAGGAA CTTCCGCCGA AGCCTTTTGC CGACAGAATA ATTGACTGGT TCTTTGCCAA ACTCAACTTC ATACGATATC CTATCGACGA AAGGATGTTT AGAGCGTCCT ACGAGGATCT TTATAACAAG TCTACCGCTT TGGATCCATC AAATGTCAGA GCGCTGCCTC TTGTTTTTAT TGTGCTTGCA TTGGCTGTCC GGCAGGCACC TGAAAAATGG GCGGGAAATG AGCAAACAAG ACGACTGTCA AGTTTACGGA TGTATTGGAG TTGTGAGTCA ACGAGCCTCT TGTAAAAGGA TTTTGACAAG CAAGTCTGAT CCGGTTCTCG CAGCCCGGCG TAGCATCCTG ATAGCTACTG CTGTTCAATC CGAAAGCCTG GAGCTAGTCG TCAGTCGTTT ACTGGTGAAT ACTACAATTA ATTTCCTCGC GATGTTTCCT GATTTCAAAT GCAGAGTGCC ATGTATTTGG TACTAATCCA CGACCGCCGT CTTACAGAGT GCTGGTCTCA GCTGGGCGCT TCTTTACGTA CGGCGCAGGC TATTGGTTTA CATCGTGATG GTTCTAAACT TGGATTAGAG TAAGCTTCCG AGGCGTGATC TTAGACTGTT CGTGACTGAC GAGCATGTTT ACAGTCCGTT TCAAACAGAG TACCGAAGAC GACTGTGGAG CTATCTGTAT CATGCAGATA AGCAGTACAG TCTGGTTTTG GGACGGCCGC CGAGCATCTC TGACAGTTAT ACCGATACTC AGTAAGCCTC GCTTCGGTTG CTAAAGCCGT TTACTGATCT GATGCATGAA AAGAACTCCA TCCAACATCG ACCTTACCGA CTATGACCCC GCTCTCGGTT TACCACCAGC CAAGCCTTTC CACGAACCTA CACCTGCCCT TTTCCTTATC TTACGCAAGA AGCTTGCTGT TGTCATTGGC AAAATTGTGC ATCATTTTCA AAAGCTCAAC GAACCTGCGC AGTATTCAGA CGTGGAGAAG CTGCAACAGG AGCTAGATCT CTTTGTTGAG CAGTTGCCTC CTCATTTCCG AATGCACGAT CCAGATAAAA GCTTAGATAG TGGTAAGGTC AATCTAGCTG TTATTGGGGA GTACGCTAAA TGACTAAAAC AGTTCATTTT TGGTTACCGG TTCATCGGTT TATGCTCTTG ACGGAAGTAC TGGTCACAAC TATTATTTTG CATGTAAGCA CGAATGACGC AATTTAGCCA TCCACCGTAT TCATCACTAA TTTCTTTTTT TTTCCTTTTT AGCGCCCGTG GTTGCTACGC AAGTTATCCA GTAACCGCTA TGCAGCCTCC CGAACAGCAT GCTTTGAGGC TGCTAAGCTT GACTTCCAAA TCAGGTTTGC TTGATTCAAC TCATTCTTCA TTCTGTTTTA CCGTCTGACC TTGAATCCGC AGACAAGATT TTGAACGTGT CCCCGAGTTC AAATTATTTG CCATCACTGG TCAATTCAAA ATGTTCAATA GCGCCATGAT CGCGGGAATA AGCGCGATCA TCGACCCTAG AGGACCAGAT TCGGACCAGA TGAGAAAAAT ATTGACTACC TTCTTGGAGG ACAATCCTTG GCATGAAGTC GCGACCAAGG ATGCCACCAC AAGGAAAGAA GTTCAAATCG TCTGTTTTTT TTTTTCGTAC ACTTCCAATG GAAAAGCTGG CTGACAATAT CTCAAATAGA TCCAAACTTT GTCCAGGCGA GCTGCAAAGA TATTTGAGGA TTCATTCGGT CCGGGCGAGC CGGCTGCGCA TGACAAAGAT AGTGCTGCTT TGCTGTTAGC CCTTCGACAG AGCAACGATT CATCAACACA TTCCAACGCA TACCCAAGGG GCGTCCAGCC AGAGGATACC CCAAACCCCG GAGGGTCAGG TGTAATGCAA CACAAGATGA TGCTTCCACC TCGGGCTTGG GGTCCCCCTC CTGGAGTGTC ATTTGCACCT GTGCATCATG GAGGAATAAA CCAAAGTCCT GCCTCAACAG GTAGTCATGA AGACGACCAC TCACAGAAGC TGTGCGTAAT GATCTTCCAT CTTTTCCCAA TTGCTTGAGC TGACATGTTT TTTTTTTTTT TTTTTCAGTC TTGACCATTG GATTAATGCT AATACCTCTC TTGCTGTTGG CGGCTCGTCC AGTGGCGGGC CCCTTCCAGT TCTCGACACG TCTGGTATGG GTTATCTTCC CCTTCCTACC ATGTCAGGTG CAATGACCCC GATTGGCCTT CCAGGTGGTC CTGCCCTCAC ACCTAATCCC GCTTTTGCTG GTTATGGTGG TCAGGCCATT ATGGAAGAAG GCGGGAATAA CTTTATGGGG CATCATTTAA CGGGCGAGTT TACCTATCCA AATCAGTTCG GGATGCTTGC CGTAGAAGGA AATGGGGTCG GCGTAGGAAA CGGGAGAGCG GGACTTGATT CCGGAGTGGA GAATAGCGAC GAGTATTGGA ACACCTTGAT TGATGGTAAG GTCGCTATTC ATTGCAATGG GACAGTTTGC TAACTAGAAG CTTTAGGAAT TTTGGGTACG ACAGGCGGAA TGTCGGGTCC CTCACAAAGC GGCCACGCTT AATTGGAACA AGTGTATATG GTATTTCCCA ATATATGCCT TTATATTTTC TTCTTATTCC GGGATCCCTG ATTTGATCTG AGATTAGACG CATGTAGCAG CCGGTCATGA AGTTATAATT ATAGTTTATA GAGACATGAG AATGCAGTCA CGACCTTTAG CATCGTAGAA GCAATTAAAT ATTCATTCAT ACATC
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Protein sequence | MKRPFPPESQ AGGPPERKFS VDSAQGDHGQ QQPQKKKRVL RESRNVTANF LVSTVTRKVP ELCVPYNPQA NNNVNGPDPQ TAARLESIEA VLSVVVRHTG GITHYDAIRD WISSLPFQKH LQSAPSTPAS PHNLMTHGSV PGPSRAGSTY HLDPQETAHL ERGGSSDDDN LAKVGKGWLG EIDGGLPENM ELNEKVKMKL DIHGTPAENL QRLITDCGVS PHKIAELVQE LPPKPFADRI IDWFFAKLNF IRYPIDERMF RASYEDLYNK STALDPSNVR ALPLVFIVLA LAVRQAPEKW AGNEQTRRLS SLRMYWSSRR SILIATAVQS ESLELVSAMY LVLIHDRRLT ECWSQLGASL RTAQAIGLHR DGSKLGLDPF QTEYRRRLWS YLYHADKQYS LVLGRPPSIS DSYTDTQTPS NIDLTDYDPA LGLPPAKPFH EPTPALFLIL RKKLAVVIGK IVHHFQKLNE PAQYSDVEKL QQELDLFVEQ LPPHFRMHDP DKSLDSVHFW LPVHRFMLLT EVLVTTIILH RPWLLRKLSS NRYAASRTAC FEAAKLDFQI RQDFERVPEF KLFAITGQFK MFNSAMIAGI SAIIDPRGPD SDQMRKILTT FLEDNPWHEV ATKDATTRKE VQIIQTLSRR AAKIFEDSFG PGEPAAHDKD SAALLLALRQ SNDSSTHSNA YPRGVQPEDT PNPGGSGVMQ HKMMLPPRAW GPPPGVSFAP VHHGGINQSP ASTGSHEDDH SQKLLDHWIN ANTSLAVGGS SSGGPLPVLD TSGMGYLPLP TMSGAMTPIG LPGGPALTPN PAFAGYGGQA IMEEGGNNFM GHHLTGEFTY PNQFGMLAVE GNGVGVGNGR AGLDSGVENS DEYWNTLIDG ILGTTGGMSG PSQSGHA
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