| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH01280 |
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| Symbol | |
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| ID | 3259293 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | + |
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| Start bp | 814842 |
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| End bp | 816609 |
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| Gene Length | 1768 bp |
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| Protein Length | 463 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638258355 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase, putative |
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| Protein accession | XP_572318 |
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| Protein GI | 58270324 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.328575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTCAGACG ATCAAGACAC TCCTACCCCA TAGCAATGGC GCGCGTGATA ACATCAGCAA
CTCCCAAGCG CGAACGGTCA GCGTCGTCCC CTTTGACAGA GCTAGAGCCC GAAGTTCCTG
CTCCCAAGGC CGTAAAGCCT AAGAGAGCCG TTCGATCAAC CAAGCCGAAA AATGAGGATA
CCAAAGAGAA TGATAATAAC GAGGACGCAC CTGCTGCTGC AAAGAAGCAG CGTGTTTCCA
AGGCCAAAGC TTGGCCCCCA GCTGAACTAG AACCGATGCT TCACCTTCCT CGTCAAGGTT
ACCCCGCATT CAAGCTCCCG TGTTCTACAG CCTCTTCTAA CGGAGGTATT GCCCCTCAGA
ACGACAAATC ACAACCGATG CTTTTGGGAG CACATGTATC TGCTGCTGGT GGTCCGGCTA
CAGCATTACT GAGAGCAGGT CTAGCAGGCG CGAATGGGTT GGCTCTGTTT GTCAAGAGTC
AAAGACAGTG GAAGAGTAAG CCGTATGAAG ATGAGACAGT TCAGAGATTC AAAGAGCTCA
TGAAGAGCAA GGAAGAAGGT GGTGAGTAAA TTGCCGTATA TGAACCATCG AGTGCTGAAT
TACACATCCA AAGGAATGGG CTATGGCCCG GAGAGTATAC TGGTCCACGG CAGTTATCTC
ATCAACCTAG GGTGAGTTAA TTGTCGCGTC GCACATGAGC CTTTTGCTAA CACTTCGCCT
CTGCAGAAAC CCCGACCCGT AAGCTTTCAG AGATTCAAGC CTATATAGAC ATCTGACATC
ACAATAGGGC CAAGTGGAAA GTCTCCTACG AATGTTTCAA AGATGATATT GCACGTTGCC
ACCAGCTTGG TATTAAACTC TACAACTGGC AGTATGTGCT TTCCGTCTCT ATGCCTTTCG
AATCCTCACC CGAGTAGTCC TGGATCCACA GTTGGCGCTT GTACCAAGGA AGAAAGTTTT
GCTCTTATCG CAAAAGCCAT CAACCAAGTA CACAAAGATG TCCCTGAAGT CATCACCGTG
ATCGAGAATA TGGTTAGTCC CCAGTCGTTA CTAAAGATCA CTGTCTAATT TAATTCAGGC
CAACGCAGGA TCCAACATTG TTGGTACAGC ATGGTCAGAC CTTTCCTCTA TCATTAAACT
CGTCGAAGAC AAGTCCCGTG TCCGCGTCTG TATCGACACT TGCCATACTT TTGCTGCTGG
TTACGATATC CGAACGCCGG AGACATACGC CGAGACTATG AAAAGGTTTG ACGAGGTGGT
TGGAAACAAG TACTTGGCTG GTGTACATCT AAATGATTCT AAGGCGAATC TGGGCGCGAA
CAAGGATTTG CACGAGAATA TCGGTCTGTA GGTGGCCCTG TGTCTTGTTT CACGAGTGAT
CAAACAAAGC TAACTTAAGT CTTAAGTGGC GAGATCGGTC TCACAGCGTT CAGATGCATC
ATGCGCGACC CTCTCATGAC GGGTATACCG CTCGTCCTTG AAACACCCGC GCCAGACGCC
CCAACCCCCG CCGAACATCT TTCCATCTGG ACAAAGGAAA TTGCCCTCTT ATACGAGATC
CAGGCCATCG AAGATGATGA ATGGGATGTC AAGAAGGGGG AGATCGAAAA GCGGTGGAGG
AAAGAGCGGG ATGCGATCAA TCCGCCCAAA GAAAAAAAGA AGCCCGCTGC CAAGGGGAAA
GCGAAGAAGG CCAAAAAAGT GGAGGACGAC GGATGCTCCC ATGATGAGGA CTAGAGTCGG
GGATAGAATT CCAGCCGGAG AGGTCAGA
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| Protein sequence | MARVITSATP KRERSASSPL TELEPEVPAP KAVKPKRAVR STKPKNEDTK ENDNNEDAPA
AAKKQRVSKA KAWPPAELEP MLHLPRQGYP AFKLPCSTAS SNGGIAPQND KSQPMLLGAH
VSAAGGPATA LLRAGLAGAN GLALFVKSQR QWKSKPYEDE TVQRFKELMK SKEEGGMGYG
PESILVHGSY LINLGNPDPA KWKVSYECFK DDIARCHQLG IKLYNWHPGS TVGACTKEES
FALIAKAINQ VHKDVPEVIT VIENMANAGS NIVGTAWSDL SSIIKLVEDK SRVRVCIDTC
HTFAAGYDIR TPETYAETMK RFDEVVGNKY LAGVHLNDSK ANLGANKDLH ENIGLGEIGL
TAFRCIMRDP LMTGIPLVLE TPAPDAPTPA EHLSIWTKEI ALLYEIQAIE DDEWDVKKGE
IEKRWRKERD AINPPKEKKK PAAKGKAKKA KKVEDDGCSH DED
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