| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH01270 |
|---|
| Symbol | |
|---|
| ID | 3259117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | + |
|---|
| Start bp | 821355 |
|---|
| End bp | 822878 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638258356 |
|---|
| Product | cytoplasm protein, putative |
|---|
| Protein accession | XP_572317 |
|---|
| Protein GI | 58270322 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000980241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAAAAACACC AGCAGAGACA GTTAGACAAA ATGGCCGAGC ACCTCATGTT CAAGGGCAAC
CTCGCCGGCC ACAACGGCTG GGTCACCGCC ATCGCTACCT CTTCCGAGAA CCCCGACATG
ATCCTCACCG CTTCTAGGGG TTAGTCGACC CCTCAGCTGG GAATTTGGAG GAGAGAAAAA
AGCTGACGAG GATTTCTAAT AGACAAGACT GTCATTGCTT GGCAACTCAC CCGAGAGGAC
AACTTGTACG GTTTCCCCAA GAAGATTCTC CACGGTCACA ACCACTTTGT GTCCGACGTT
GCCATCTCTT CCGACGGCCA GTTTGCTCTT TCTTCCTCTT GGGACCACAC CCTTAGGTTG
TGGGACCTTA ACACTGGTTT GACGACCAAG AAGTTTGTCG GCCACACTGG CGACGTTCTC
TCGTGAGTTT TTGGAGGACA GGAGAGCATT TGGAAGAAAA AAGCTGATTG GGTAATGTAG
CGTCTCTTTC TCTGCTGACA ACCGTCAAAT TGTTTCTGCC TCCCGAGACC GATCCATCAA
GCTCTGGAAC ACCCTTGGAG AGTGCAAGTT TGACATTGTC GAGGACGGCC ACACCGAGTG
GTGAGTGGAG TCTTTGGTGC CCATGGAGCA GAGAAATTTG GAACAAAACG CTGAGGCTTG
ATTTTCCAGG GTCTCCTGCG TTCGATTCTC CCCTAACCCC GCCCTCCCCG TCATCATCTC
TGCTGGTTGG GACAAGACCG TTAAGGTGAG TTCTTTCGTT CCTTTTTTTT TCATCTGCAC
AACTACCGAT ATGATGCGAT CTATATATTT GCTACTTCAG AGGGGTGAAA CAGACCCGAT
GAGACCAACT TTTCCACCAA GATCTCTGAT CACTCCTATA TTCTCTCAAA AATTTGCAAA
TAGATTGAGA GTAGCTTGAG CTGACAGTTC GAGCTAGGTC TGGGAGCTCT CCAACTGCAA
GTTGAAGACC ACCCACCACG GTCACACCGG TTACCTTAAC ACCCTCGCCG TCTCTCCCGA
CGGTTCCCTC GCTGCCTCCG GTGGTAAGGA CGGTATCACC ATGCTCTGGG ACCTCAACGA
GGGCAAGCAC CTCTACTCTC TCGACGCCGG AGACGTTATC AACGCTCTCG TCTTCTCCCC
CAACCGATAC TGGCTCTGTG CTGCTACCGC TTCCTCCATC AAGATCTTCG ACCTCGAGAG
CAAGTGAGTG TTTTATGATT TTCATATTGC TATGTTCTGT GACTAATAAT ATTTCAGGTC
TCTTGTCGAC GACCTCCAAC CTGACTTTGA CGGCCTCTCC GACAAGGCCC GCAAGCCTGA
ATGCACTTCC CTCGCCTGGT CCGCTGACGG CCAGACTCTC TTCGCTGGTT TCTCTGACAA
CCTCGTCCGA GTCTGGGCTG TCGTTGCTTA GAGAGGGTGT TGGTAGTTGT GCATGCAGAT
CTTCTCACTG GATTTTTGGA GTTTTAATCT GTCGTTTACA ATGTTCTTTT TTGAATGTGG
TGCATTATGT ATAGGGTACA TTAC
|
|---|
| Protein sequence | MAEHLMFKGN LAGHNGWVTA IATSSENPDM ILTASRDKTV IAWQLTREDN LYGFPKKILH
GHNHFVSDVA ISSDGQFALS SSWDHTLRLW DLNTGLTTKK FVGHTGDVLS VSFSADNRQI
VSASRDRSIK LWNTLGECKF DIVEDGHTEW VSCVRFSPNP ALPVIISAGW DKTVKVWELS
NCKLKTTHHG HTGYLNTLAV SPDGSLAASG GKDGITMLWD LNEGKHLYSL DAGDVINALV
FSPNRYWLCA ATASSIKIFD LESKSLVDDL QPDFDGLSDK ARKPECTSLA WSADGQTLFA
GFSDNLVRVW AVVA
|
|---|
| |