Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH01100 |
Symbol | |
ID | 3259040 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | - |
Start bp | 872727 |
End bp | 874455 |
Gene Length | 1729 bp |
Protein Length | 427 aa |
Translation table | |
GC content | 47% |
IMG OID | 638258373 |
Product | NADPH dehydrogenase, putative |
Protein accession | XP_572301 |
Protein GI | 58270290 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.111379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTCACCTT CCAAAAAATC ATCATAGGAG TTCATCAGCT CATCACAACT TACCATCGCG ATGCCCATTG CCGAGGCCAC CGACATCCTC TTTTCGCCCA TTACTCTTGG AGCGATGAAG CTCCAACATA GAGTTGCTTT GGCACCCATG ACCAGGAACA GAGCTGTTCC GTCAAATCTG AACCCCGGCA CGTATGTCCC TTGCCCTCTT ATGGCAGAGT ATTACACCCA AAGGACAACG GAAGGAGGTC TGGTCATCAG TGAAGCATTG CCAATCTCTC TACAGGTGGA TCTGCTTATT CCACCCCTTG CCAATGATCC ACACTAATCA CTTTCTACAA AGGCTGCTGA TGCACGTGCG GTTCCTGGAA TTTTCACTGA AGAACAGATT GAGGCCTGGA AACCGATTGT AGATGCTGTT CACCAAGCTG GAGGGATTTT CGTGGCCCAG CGTAAGTGTA AAATTATCAT GGATTGCGCT CAGATCAGCT AACCTAGATG TCATTCAGTT TGGCACCAAG GACGTACAAG AATGGTCGAA AATGAATACG CAATCATATC ATCTTCAGCT GTCCCTATAG TCAAGTCCTT TACTGGCTTA CCGGGGCTTA AGCCTAGGCC TATGACGCTT GAAGATATTG AACGCGTCAA GAAGGAGTAT GCTCAAGCGG CAGTGAACTG TATCAAGGCA GGCTTCGATG GAGTTGAAAT ACAGTAAGCA ACGCCTTGAC TCTAGATATG GTCGATATCA CAGTGTTGAC TGCATGGTGC GGCTGCAGCG GTGCCAATGG CTATCTGCCA GAGCAATTCC TTCACTCTAA CATCAATCGG CGCGATGACA AGTACGGAGG TTCTCCTGAA AACCGCAATC GCTTCGTCCT TGAAATATGT CAAGCAGTCA CTCGAGTTAT AGGACCTGAT CGTTTCGGCC TTCGGCTTTC CCCGTACGGA TTTTTCAATG AAGCGCGAGG AGATAATAGA GTTGAACAAT GGACGATGTT ATGTCGGGAT ATCAAAGGCC TTGGATGGGC ATATGTCCAT TTCATGGAGC CTCGATATGA TGAGATAAGG TCAGGTGCCG ACAAGCTTGC TGAATTGGGA GAAAATAATG AAGACGTAAC TTTGGATCCT TTTGTGAACG CTCTTGAAAA TTGTATACCC GTCATTGTGG CCGGTGGATA CGATGCTGAC AATGTCAGGA AGTCAAGAGT TTTGGAGGAT AAGGTAAACA TTTCGCCCTT AAAACAGTAT ACCCCATAAG CTGACTTGTT TGCCTACGCA GAAAGCGGAT GTTGTGGCTT TCGGGCGCTA CTTCACTTCT AATCCAGACG TAAGTCTCAT GACATCCAGT CGAGATTCGC ATTACTGATC CAACCATCTT AGCTCGTCTA TCGCCTAAAA CACGATAAGC CTTTCGTCCA ATACATAAGA CCACGGTTCT ACGGGCCATT CCCAGATCCG GAAGTTGGCT ACACGGATTT CCCTTTTTGT CACGAACTCT CCGGCACCCC AGAGAGAAAA GCACTGTTAT CAAGTGGGAC CGCAAAGGTT CTGAAGGTGG CAGAGCCTGG TTGGCAGCTA TCAAAATCAG GAATACAGTA AGTTGCAATG CCAAAAGGCG AAAAAGGCGA ATGTTGACTC AAATGGTATG AACGAAGATT GGGAGGTTTG TTTGCCGCGG TTACTCAGGA TTAGATATAG TGTGGCCCAC AGAACGCTCA TGAAATGCA
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Protein sequence | MPIAEATDIL FSPITLGAMK LQHRVALAPM TRNRAVPSNL NPGTYVPCPL MAEYYTQRTT EGGLVISEAL PISLQAADAR AVPGIFTEEQ IEAWKPIVDA VHQAGGIFVA QLWHQGRTRM VENEYAIISS SAVPIVKSFT GLPGLKPRPM TLEDIERVKK EYAQAAVNCI KAGFDGVEIH GANGYLPEQF LHSNINRRDD KYGGSPENRN RFVLEICQAV TRVIGPDRFG LRLSPYGFFN EARGDNRVEQ WTMLCRDIKG LGWAYVHFME PRYDEIRSGA DKLAELGENN EDVTLDPFVN ALENCIPVIV AGGYDADNVR KSRVLEDKKA DVVAFGRYFT SNPDLVYRLK HDKPFVQYIR PRFYGPFPDP EVGYTDFPFC HELSGTPERK ALLSSGTAKV LKVAEPGWQL SKSGIQLGGL FAAVTQD
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