Gene CNH01070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH01070 
Symbol 
ID3258990 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand+ 
Start bp881963 
End bp883016 
Gene Length1054 bp 
Protein Length268 aa 
Translation table 
GC content49% 
IMG OID638258376 
Productpyridoxamine-phosphate oxidase, putative 
Protein accessionXP_572553 
Protein GI58270794 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTCC CAAGAAGTAT CATCAAGACA CTCGATAAGC TTATATTAAA TAGCACCATT 
CGTACTATGT CCACCCAACA CGTCTTCGGT ACTCCGTCCA CCTCCTCGGA CCCCGCCTTA 
CCCTCTTCTG CTCCCGAGAC TGTCAAGCTC ACCACCCACA ATCAGTACCT GACTCCGCGG 
CTGCTCGCTT CCGACCTCTC TCCCAACCCT CTTTTGCAGT TTAACTCCTG GTTTGCGTCT 
GCTCTCCAAC CCTCTCAGGG CGAAGTTGCT GCAGGTCGCA AAGTCAATGA ACCAGAGGCT 
ATGACTCTGT CTACCGCTAC CGCTCAAGGT ATCCCTTCTT CTCGAGTAGT GTTACTCAAA 
ACCGTAGATA AGACGGGCTT CGTCTTCTTC ACAAACTATA CCTCACGGAA GTCGGAAGAA 
CTTCTTGCAA ACCCTTACGC GGCACTTACG TTCTACTGGC GAGAAGTATC AAAGCAAGTC 
AGAGTGGTGG GTAAGGTCGA GAAAGTTAGT AGGGAGGAGA GTGTAGAGTA CTTTAACACC 
CGACCAAGGG GCAGTAGGAT TGGTGCGTGG GCGAGTAAGC AAAGTCAGCC GGTGGAAGAG 
GGTCAGTTGG AAGAACGGGT GAAGAATGAG GAGAAGCACT GGGAAGGGAA GGAAGTGGAG 
TGCCCTGAGT TCTGGGGTGG TTGGAGGGTC GTTCCATTGT GAGCAATCTT TCACCTCATG 
CATGACCTTC TAATTGACTT GGTCTTTAGC GAGGTTGAAT TTTGGTCTGG ACAGCCCTCT 
CGTTTGCATG ACCGATTTAG GTACACCCGA CCAGAAGGAA GTGAGGGGGA GTGGGAGATT 
AAGAAGCTTT CTCCGTAATC TATCATGGTG GTTTTAAGGA GAGGATAAAA ATGTTGTCGT 
AATATCTACA AATAGAATAG AAGTAAGTGC CGCTGCGAAT ACAAGCTCCA GAAGACGTGA 
CCTGACCAGT TGTCCAGATA TACATCTCAG TGTACGCACG ATTGTTAGGC TTTATTGCAA 
TCACATGAAT GAATAACCGA CTTGAATCCC TTCT
 
Protein sequence
MAFPRSIIKT LDKLILNSTI RTMSTQHVFG TPSTSSDPAL PSSAPETVKL TTHNQYLTPR 
LLASDLSPNP LLQFNSWFAS ALQPSQGEVA AGRKVNEPEA MTLSTATAQG IPSSRVVLLK 
TVDKTGFVFF TNYTSRKSEE LLANPYAALT FYWREVSKQV RVVGKVEKVS REESVEYFNT 
RPRGSRIGAW ASKQSQPVEE GQLEERVKNE EKHWEGKEVE CPEFWGGWRV VPFEVEFWSG 
QPSRLHDRFR YTRPEGSEGE WEIKKLSP