| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH00880 |
|---|
| Symbol | |
|---|
| ID | 3259217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | + |
|---|
| Start bp | 931335 |
|---|
| End bp | 933259 |
|---|
| Gene Length | 1925 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638258394 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_572282 |
|---|
| Protein GI | 58270252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAGTG GGTTCGACAT TGCTTCACGC CATTCTTATC AGTCATGGCA CGAACGCTTT
AAGAAGAATT CATCCTCATT CTCTGCAAGG GTCGAGCGCT ATATCAAGGC CGGAATTGCC
AGAGAAACGC TCAAAACAGA AAAAGAACTG AAAAACTTTA GACGACCAAA TCAAGAAGAT
GCCGCTGCAG ACAGCCAGGG CGAATCCTCT GTCTCACCGC TAAAAAGCAA TAAGCGCAAG
TTGGTGTCCG AGGATGATCT CGATAACGAG GATGCCGACG ACAATGTTCC CCTCAGAAGC
ACGCGAACGG TGAAAAAGGC AAAGAAAGAG GGAAAGTCTC CTATTGACCC AAATACGAAT
GTGCCTAGTG CGGTGAAGGA CAAGGGCAAA GCTCGTGCCC CCACTCCTTC CCAGACTCCG
TCTATATCCT CCACCAAGGG TTCATCCCAG CAATCTCAAC TCGAAATCAC CAAAGTCTTC
ACGGAATTCA CGGATCTCAA TCCTCGTGGA GGACCTTCAG ATACTCGCTA TTCATCTCGT
AATCCTCAGA GCACGTCACA GTCAGAACAC CGACTTTCGC TACTCTCACA ATCCCATGCC
CGCCGAAAAT CAGGATCAGA AGATTCAGGT CGGACACCGG ATCTTGGTGC GGCCGATGAA
CCAGAACCTG CAGGGGTATA TGAAGATCCC CCGGTCTTTA TAGAGACAGT AGTACAGAAG
TTGCCTGATG AGGAAGAACA GCGGTTATTG CAGACGAAGC AGCAGTTTGG AAAAGGACAA
GCGGAGAAGG ATGATATGGC AATGGATGCG GAGGAAGTCA ACGACCTTTT GATCACAGCT
TTGACGGAAG ATGAGGAAGA GCCTAAAAGG GGTGAGGTAG ATGGCGAGGC CAATAAGCAA
GGTGTGGCGG AAGCAATGGT GGAGATGACG GAAGTGGATG TGGAGAAGTC TGAAGGAACG
AGTGCTGCCA AAAGGAGCGA AGTCAGGGTG GAGATATCTG CGTCGCCTCG CGTGAGAGTG
GGAAAACAAG CCGACGAGCC ACACCAACCT ACATTCCCTC GTTCTGTCAG TCCGCCGATG
GATATCCAAC CCGCAACTGA GCTCGTTCGC CGAAAAACCG CCAGCGAGTC TCCTGCCAAG
ATGTCTGCGC AAGGTTATTC ACAAAGCGAC GAGGCTGTGG ACCTTCCTCA ACCTGTCGAG
GAGAAAGAGA GCAGCAGTGC TGATACAGCA CCTGTTCAGG CACAGCCTGC TCTTCTCAAA
CTAATCCCTT CCCCTGTACA TACGGCTATC GACAGTGACG CTGATCACCA TACTAATCAT
ACCTCGTCGA CCAGCTTCCA CACTCCGCAA TCCTCCAAGC ATCGCTTAGG CCGTCCTCGT
CCTTCATTAC TACGGGAACA GATTCTTGCA AGCTCTACCA AACGACGACG TACTCAAGAT
CGACTATCAC TCTCTACTTC TTCCGTCGCC GGGACCGGGG CATTTCATAA GTCACCAGTG
CAAGTGGTGG AGTACGATAC AGTATATGCG GACAATGCCA TACCGCCTCG ACCACCAAGG
CCGTCATTGG ATACAGCTAG TCCGATTACC CCTAGCGTCC AAGCTGAGAA TGGTACTGCT
GAACGACGCC CGGCACCTCC ACCGAAACCT CTCACATGGG AAGAACGTAG TGCAAAGGTA
GCTGCGGGAG CGGACCTGGC GGCGCATATG AGGAAGCAGT ATAGAGAGAA AATAGTGGAC
CTGTCAAACA AGTACGGATT GACCGTTTCA GAGGTGGTTA CGCGGATCAG CAAACTGAAA
GCGGGAGGCG CAAAGGGAGA ACATTATTGG GATGATGTAG AGAAGGGATT TGAGCAAGCG
TTGGGCAGAA AGGTTAATTA GCTGGTATAA TGATTTACAT CTTGGTGTTT ATGATTAGTC
TCTCA
|
|---|
| Protein sequence | MHSGFDIASR HSYQSWHERF KKNSSSFSAR VERYIKAGIA RETLKTEKEL KNFRRPNQED
AAADSQGESS VSPLKSNKRK LVSEDDLDNE DADDNVPLRS TRTVKKAKKE GKSPIDPNTN
VPSAVKDKGK ARAPTPSQTP SISSTKGSSQ QSQLEITKVF TEFTDLNPRG GPSDTRYSSR
NPQSTSQSEH RLSLLSQSHA RRKSGSEDSG RTPDLGAADE PEPAGVYEDP PVFIETVVQK
LPDEEEQRLL QTKQQFGKGQ AEKDDMAMDA EEVNDLLITA LTEDEEEPKR GEVDGEANKQ
GVAEAMVEMT EVDVEKSEGT SAAKRSEVRV EISASPRVRV GKQADEPHQP TFPRSVSPPM
DIQPATELVR RKTASESPAK MSAQGYSQSD EAVDLPQPVE EKESSSADTA PVQAQPALLK
LIPSPVHTAI DSDADHHTNH TSSTSFHTPQ SSKHRLGRPR PSLLREQILA SSTKRRRTQD
RLSLSTSSVA GTGAFHKSPV QVVEYDTVYA DNAIPPRPPR PSLDTASPIT PSVQAENGTA
ERRPAPPPKP LTWEERSAKV AAGADLAAHM RKQYREKIVD LSNKYGLTVS EVVTRISKLK
AGGAKGEHYW DDVEKGFEQA LGRKVN
|
|---|
| |