Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH00860 |
Symbol | |
ID | 3259367 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | - |
Start bp | 943711 |
End bp | 946200 |
Gene Length | 2490 bp |
Protein Length | 680 aa |
Translation table | |
GC content | 50% |
IMG OID | 638258396 |
Product | hypothetical protein |
Protein accession | XP_572279 |
Protein GI | 58270246 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.43522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTCC TCTCAAAACC ATCCCGGTCC TACGCCAACG TGGATCACGA CGCAGAAGGT CTCAGTGCAG TCGGCAGTGG CCCCTATTCA TCCACGCAGC AAGGAAAAAA ATTGAGCAAG AAAGGCGATG GATTCAAGAC GTATCGTCCG CGTGAGTATC CCTCTACGTC ATCTATACAC TGCTGACCTT TCACTAGCCA TAAGTGAAAC ACACCTTCGA CGATCACTAG GGTACGATCC TCATCCCACT TCTCACTTTG CGCCCCTTCC ATCCGCCTTC CAATCCCACC GCATCAAGAA AGAGCAGGCC CTTGCAGGTC AACGCGCCGA GGCCGACCAC CTTCTCCAAC CAGGCTATCG ATCTTATCAT CCTTCAGACG AAGCTGATTC TTCCGTCGCT CCTCGGCGCA CGGCAGGCGG TCTTGGCAGT CTACGGCCAA GCCCCAGCAC GTCCAGCTTC AATGGCTCGG CAGCAATTGG AAACGGACGT CGAGCGGCCG GGGTGTATAT GGATTCAAAT GGGAAACTGC ATGATACCGA ATACGACCCG TTTGCTGGTG TCAAGGATAT GACCAGAGCA AAATCGAATC GCCGAAGCGC GTTTGGGAGC GAAAGGCATC ATCGCGCCGG TTCCTCTTCA TCATCCTCCA GCGATAGCGG CCAAGCGTCT TATCGACGAC CGAGTCATGA TATGAGAGAG GAAGAAGAGG TTAGACGCAA GCTGCAAATA GAGAGGCAAC AAATGGACGA TGTTTCATCT TACGTCGCTA GACGGAAAAG TTTGCTTTCA GAACGAGAAG GAAGTGGTAG AGGTAGTCCA TCAATCAGGT CGAGCGAGGA CGGACCGCCA ACAGGAGGTA GCTTTGTTAC GGCTCGCACA AGATCTCAGC AGGGATACTA CTACCCTTCA CCTTTATCAC CCTCTTTTGC GACGCAAGGT GCGAGTTTCG CCAACGGTTA CCCTTCACGC ACTCCTACAG CATCTGCTTT TCCTGCTTCT GCCGGTGAAG GCACACCACC TGAAAAGTCG ACAGAAATGA CACGAGCTAA ATCACCTCCG CCTCCACCCA AATACGAACC TCCTCCTGTA GAAAGACCCA AACCAAAATC AAAAGTTGAA GTGAAAGATG GTACCACCAA AATCATTGGC TTCGACGGAC CTGTACGTCC GATCTCACCT AACCCACCGC CAACCGAACA ATTCTCCAGC CTCCGCGTCC GTTCCCCTTC CCTTTCATCC TCATCACACC ACCTCAGCCC GCCAGGCGCA CCTGCTTCTG CCGCAGAAGG ATTATCTGCG GCTTCGAGGT CCTCTGCAGA TTTGACTCGT CAAATGCGCT CACCGAGACC GATTGAAAGG CGACATCAGG CGAGGGACGA TATTTACCCT GAAACGCCTG CGCAGACTAA ACGACGACAA GAGCGTGAGC AACGCCGGCT TGTTTCGGGC CATGGACCTC CTGCTCATGC GTTACCACCT TCAGCAAGCC ACAACACCGC TCTCGCGGTT GACACTGCTC TTGCAGAGAA TGGCGGGGCA AGAATTTTGC CAGAGATTGA AATCGTTGAG GATGATGATC CGAGAATCGT CTTTCCTAAA GAAGGCAAAA CCACAAGGGT GCAGAAGACG CATGATCATG TCATCAAAGG CCCATTCTCA CATGCTCTCC AAGCGCGAAA GGGGTCTCAT GCATCCTCCA CGGCGCTCAA CACGTTTGCC AGTGCAGGCA ACGGCGGTTT TTCCTCTGCT ATTGGCCATT CTTCATCAAT ACACGACTTT TCTTCTCTTA CCCGCCCCAA GTCACTAACT GGCTCAAAAC CTGGTTCATC CGTTATAGAT GATGCCGGCG GTTATCTCCC CAGTCGATGG GCGAGCGGAG ATAAAAATTT GAGAGTGACA GAGGATGAGA GAGAAAAATA TAGACCGAGG GAATGGGGTG GGAAGTATGG TGATCTGGGA GGAAGGGAAA ATGAATGGAG GTAAGTTCAT CATCCAATCT CTATCGTATT TGCAATGTAG GAATGCTGAT GCTTTTGCTT GTTTAGACCG ACACCAAAAG ACCAAATGAA GCGCAACCTG AAAGACATAG CGACAAGCGC TAGGTTTAGT TTGTATAGGA CAAAGAAGAA GTTGTTACGG AAAGCCGATC TTTAGAAAGG TGCCTCACAA CCATCCCTCC AAGTCAAGTA TCTTTGCTTG TTCCATGGTT TTCCTTCGTC ATCTTCCTAT CATCGGAATA TTCAGTCAGA TTATGTGTTC CTGATTTTTG TAGCAGTTTC TGTTGTCTTT GCGGTTGTAT GTGTTCTTAA CTTTTTTTTT TCAGACTGTT TGGGCTTATA TACCAAGCAA GATCTATTGT ATACACGTTC ATTTCCTTTC TTACCTCGTT CAGCCATATA TCATTTGCTA TCAGCCAGAG TTGTGGATTC CATTCCTGGA AGTGCAAAAG GCTTTTCTTG GTTTAGCCGA CATGTATCGC AATATACCAT
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Protein sequence | MTLLSKPSRS YANVDHDAEG LSAVGSGPYS STQQGKKLSK KGDGFKTYRP PISETHLRRS LGYDPHPTSH FAPLPSAFQS HRIKKEQALA GQRAEADHLL QPGYRSYHPS DEADSSVAPR RTAGGLGSLR PSPSTSSFNG SAAIGNGRRA AGVYMDSNGK LHDTEYDPFA GVKDMTRAKS NRRSAFGSER HHRAGSSSSS SSDSGQASYR RPSHDMREEE EVRRKLQIER QQMDDVSSYV ARRKSLLSER EGSGRGSPSI RSSEDGPPTG GSFVTARTRS QQGYYYPSPL SPSFATQGAS FANGYPSRTP TASAFPASAG EGTPPEKSTE MTRAKSPPPP PKYEPPPVER PKPKSKVEVK DGTTKIIGFD GPVRPISPNP PPTEQFSSLR VRSPSLSSSS HHLSPPGAPA SAAEGLSAAS RSSADLTRQM RSPRPIERRH QARDDIYPET PAQTKRRQER EQRRLVSGHG PPAHALPPSA SHNTALAVDT ALAENGGARI LPEIEIVEDD DPRIVFPKEG KTTRVQKTHD HVIKGPFSHA LQARKGSHAS STALNTFASA GNGGFSSAIG HSSSIHDFSS LTRPKSLTGS KPGSSVIDDA GGYLPSRWAS GDKNLRVTED EREKYRPREW GGKYGDLGGR ENEWRPTPKD QMKRNLKDIA TSARFSLYRT KKKLLRKADL
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