Gene CNH00860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00860 
Symbol 
ID3259367 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp943711 
End bp946200 
Gene Length2490 bp 
Protein Length680 aa 
Translation table 
GC content50% 
IMG OID638258396 
Producthypothetical protein 
Protein accessionXP_572279 
Protein GI58270246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.43522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTCC TCTCAAAACC ATCCCGGTCC TACGCCAACG TGGATCACGA CGCAGAAGGT 
CTCAGTGCAG TCGGCAGTGG CCCCTATTCA TCCACGCAGC AAGGAAAAAA ATTGAGCAAG
AAAGGCGATG GATTCAAGAC GTATCGTCCG CGTGAGTATC CCTCTACGTC ATCTATACAC
TGCTGACCTT TCACTAGCCA TAAGTGAAAC ACACCTTCGA CGATCACTAG GGTACGATCC
TCATCCCACT TCTCACTTTG CGCCCCTTCC ATCCGCCTTC CAATCCCACC GCATCAAGAA
AGAGCAGGCC CTTGCAGGTC AACGCGCCGA GGCCGACCAC CTTCTCCAAC CAGGCTATCG
ATCTTATCAT CCTTCAGACG AAGCTGATTC TTCCGTCGCT CCTCGGCGCA CGGCAGGCGG
TCTTGGCAGT CTACGGCCAA GCCCCAGCAC GTCCAGCTTC AATGGCTCGG CAGCAATTGG
AAACGGACGT CGAGCGGCCG GGGTGTATAT GGATTCAAAT GGGAAACTGC ATGATACCGA
ATACGACCCG TTTGCTGGTG TCAAGGATAT GACCAGAGCA AAATCGAATC GCCGAAGCGC
GTTTGGGAGC GAAAGGCATC ATCGCGCCGG TTCCTCTTCA TCATCCTCCA GCGATAGCGG
CCAAGCGTCT TATCGACGAC CGAGTCATGA TATGAGAGAG GAAGAAGAGG TTAGACGCAA
GCTGCAAATA GAGAGGCAAC AAATGGACGA TGTTTCATCT TACGTCGCTA GACGGAAAAG
TTTGCTTTCA GAACGAGAAG GAAGTGGTAG AGGTAGTCCA TCAATCAGGT CGAGCGAGGA
CGGACCGCCA ACAGGAGGTA GCTTTGTTAC GGCTCGCACA AGATCTCAGC AGGGATACTA
CTACCCTTCA CCTTTATCAC CCTCTTTTGC GACGCAAGGT GCGAGTTTCG CCAACGGTTA
CCCTTCACGC ACTCCTACAG CATCTGCTTT TCCTGCTTCT GCCGGTGAAG GCACACCACC
TGAAAAGTCG ACAGAAATGA CACGAGCTAA ATCACCTCCG CCTCCACCCA AATACGAACC
TCCTCCTGTA GAAAGACCCA AACCAAAATC AAAAGTTGAA GTGAAAGATG GTACCACCAA
AATCATTGGC TTCGACGGAC CTGTACGTCC GATCTCACCT AACCCACCGC CAACCGAACA
ATTCTCCAGC CTCCGCGTCC GTTCCCCTTC CCTTTCATCC TCATCACACC ACCTCAGCCC
GCCAGGCGCA CCTGCTTCTG CCGCAGAAGG ATTATCTGCG GCTTCGAGGT CCTCTGCAGA
TTTGACTCGT CAAATGCGCT CACCGAGACC GATTGAAAGG CGACATCAGG CGAGGGACGA
TATTTACCCT GAAACGCCTG CGCAGACTAA ACGACGACAA GAGCGTGAGC AACGCCGGCT
TGTTTCGGGC CATGGACCTC CTGCTCATGC GTTACCACCT TCAGCAAGCC ACAACACCGC
TCTCGCGGTT GACACTGCTC TTGCAGAGAA TGGCGGGGCA AGAATTTTGC CAGAGATTGA
AATCGTTGAG GATGATGATC CGAGAATCGT CTTTCCTAAA GAAGGCAAAA CCACAAGGGT
GCAGAAGACG CATGATCATG TCATCAAAGG CCCATTCTCA CATGCTCTCC AAGCGCGAAA
GGGGTCTCAT GCATCCTCCA CGGCGCTCAA CACGTTTGCC AGTGCAGGCA ACGGCGGTTT
TTCCTCTGCT ATTGGCCATT CTTCATCAAT ACACGACTTT TCTTCTCTTA CCCGCCCCAA
GTCACTAACT GGCTCAAAAC CTGGTTCATC CGTTATAGAT GATGCCGGCG GTTATCTCCC
CAGTCGATGG GCGAGCGGAG ATAAAAATTT GAGAGTGACA GAGGATGAGA GAGAAAAATA
TAGACCGAGG GAATGGGGTG GGAAGTATGG TGATCTGGGA GGAAGGGAAA ATGAATGGAG
GTAAGTTCAT CATCCAATCT CTATCGTATT TGCAATGTAG GAATGCTGAT GCTTTTGCTT
GTTTAGACCG ACACCAAAAG ACCAAATGAA GCGCAACCTG AAAGACATAG CGACAAGCGC
TAGGTTTAGT TTGTATAGGA CAAAGAAGAA GTTGTTACGG AAAGCCGATC TTTAGAAAGG
TGCCTCACAA CCATCCCTCC AAGTCAAGTA TCTTTGCTTG TTCCATGGTT TTCCTTCGTC
ATCTTCCTAT CATCGGAATA TTCAGTCAGA TTATGTGTTC CTGATTTTTG TAGCAGTTTC
TGTTGTCTTT GCGGTTGTAT GTGTTCTTAA CTTTTTTTTT TCAGACTGTT TGGGCTTATA
TACCAAGCAA GATCTATTGT ATACACGTTC ATTTCCTTTC TTACCTCGTT CAGCCATATA
TCATTTGCTA TCAGCCAGAG TTGTGGATTC CATTCCTGGA AGTGCAAAAG GCTTTTCTTG
GTTTAGCCGA CATGTATCGC AATATACCAT
 
Protein sequence
MTLLSKPSRS YANVDHDAEG LSAVGSGPYS STQQGKKLSK KGDGFKTYRP PISETHLRRS 
LGYDPHPTSH FAPLPSAFQS HRIKKEQALA GQRAEADHLL QPGYRSYHPS DEADSSVAPR
RTAGGLGSLR PSPSTSSFNG SAAIGNGRRA AGVYMDSNGK LHDTEYDPFA GVKDMTRAKS
NRRSAFGSER HHRAGSSSSS SSDSGQASYR RPSHDMREEE EVRRKLQIER QQMDDVSSYV
ARRKSLLSER EGSGRGSPSI RSSEDGPPTG GSFVTARTRS QQGYYYPSPL SPSFATQGAS
FANGYPSRTP TASAFPASAG EGTPPEKSTE MTRAKSPPPP PKYEPPPVER PKPKSKVEVK
DGTTKIIGFD GPVRPISPNP PPTEQFSSLR VRSPSLSSSS HHLSPPGAPA SAAEGLSAAS
RSSADLTRQM RSPRPIERRH QARDDIYPET PAQTKRRQER EQRRLVSGHG PPAHALPPSA
SHNTALAVDT ALAENGGARI LPEIEIVEDD DPRIVFPKEG KTTRVQKTHD HVIKGPFSHA
LQARKGSHAS STALNTFASA GNGGFSSAIG HSSSIHDFSS LTRPKSLTGS KPGSSVIDDA
GGYLPSRWAS GDKNLRVTED EREKYRPREW GGKYGDLGGR ENEWRPTPKD QMKRNLKDIA
TSARFSLYRT KKKLLRKADL