Gene CNH00670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00670 
Symbol 
ID3259181 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp995612 
End bp996992 
Gene Length1381 bp 
Protein Length411 aa 
Translation table 
GC content54% 
IMG OID638258416 
Productphosphoserine transaminase, putative 
Protein accessionXP_572260 
Protein GI58270208 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0144316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAATCCACAT CTCGCATCTC CAGCTAAAAT ATCCAAACAT GCCAGACAGG AAAGACGTTC 
ACAACTTTGC CGCTGGCCCC TCGCCTCTCC CCACCACCGT CCTCGAAGAT GCCGCCAAGG
GTCTTTTGAA CTATGCCGAT ACCGGCATGG GTATCTGTGA ACTCAGTCAC CGAGGCAAAG
AGTTCAAGGC CGTCATTGAA GGTGCCGAGG GTAGGTCCCG TTGTCTTTTT TTATTATTAT
TATGGTACAC CAACAAATTC CATAGCCAAT CTTCGAAACC TCCTTGCCAT CCCCGATAAC
TACACCATCC TCTTCTCCCA AGGCGGTGGA ACCGGCCAAT TCTCTGCTGT CCTCCTTAAC
CTCCTCTCCG CCCACCGTCT TGCCCACCCC GTGCCTGCCG AAGAGTTCAA ACCCCCTACC
ATCGACTACG TCTTGACAGG CTCCTGGTCG TCCAAGGCAT ACGCCGAAGC CCAACGCCTC
GTCCTCCCGC CCTTCCCCAA CTGCCCAGGC TTTGCGACAC CCCGCATCGC CGCGAGCACA
AAGGCTACGG GCTGGACTAG ATTGCCCAAG CGGGAAGAGT ACGATTTCAG TAAAGATGCC
GCGTATGTGT ATTACTGCGA GAATGAAACT ATCAACGGTG TCGAGTTCCC TCCCGCTTCC
GCACAGGACT CTGCGTATGC TTTCCCCTTT GACCTCGTCC CTGAAGGCGT CAACGTCGTC
GCCGACTACT CTTCGTCATT CATCTCCCGC CCCATCCCCA ACATTGAAAG ACACGCCATC
ATCTATGCCG GTGCGCAAAA GAACCTCGGA CCCTCTGGTG TCACCGTCCT CATCGTAAGG
AACGATCTCT TGGTCGACAC TACCGCCGCT GCCAAGCTCG GCTGCGTCCC CGCAACTCCT
ATTACTTATG AATACAAAAT CCTCGCTGAA AACGCTTCTC TCTACAACAC CCCTCCCACT
TTCCCCATCT ACGTCTCTGC CCTCGTGCTC CAACATCTCA TCGACGCCAA GGGAGGTCTT
ACCGGTCTGG AAGCGACGAA CCGCGAAAAG GCAAAACTCC TTTATGCGAC TCTTGATGCA
GCCGAGTCAA GGGGCAAGGT GAGGACTGTT GTGAGGGAGA AGGATGCGAG GAGTTGGATG
AACGTCACGT TTGAGATTGT GGGAGAGGGT AAGGAAAAGG CGTTCTTGGA AGGTGCTGAG
AAGAAGGGGT TCAAACAACT CAAGGGCCAC AGGTCGGTTG GTGGTAAGTC AGGTCTTTAA
TGGTTTAAAC CACAACTGAC ATGGGATGCA GGTATCCGAG CGTCAATTTA CAACGCCGTC
ACCGTCGACT CTGTCAAGGC TCTCTGCCAA TATATCAACG AGTTCGGAGA GCAATAGATA
T
 
Protein sequence
MPDRKDVHNF AAGPSPLPTT VLEDAAKGLL NYADTGMGIC ELSHRGKEFK AVIEGAEANL 
RNLLAIPDNY TILFSQGGGT GQFSAVLLNL LSAHRLAHPV PAEEFKPPTI DYVLTGSWSS
KAYAEAQRLV LPPFPNCPGF ATPRIAASTK ATGWTRLPKR EEYDFSKDAA YVYYCENETI
NGVEFPPASA QDSAYAFPFD LVPEGVNVVA DYSSSFISRP IPNIERHAII YAGAQKNLGP
SGVTVLIVRN DLLVDTTAAA KLGCVPATPI TYEYKILAEN ASLYNTPPTF PIYVSALVLQ
HLIDAKGGLT GLEATNREKA KLLYATLDAA ESRGKVRTVV REKDARSWMN VTFEIVGEGK
EKAFLEGAEK KGFKQLKGHR SVGGIRASIY NAVTVDSVKA LCQYINEFGE Q