| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH00630 |
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| Symbol | |
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| ID | 3258998 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | + |
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| Start bp | 1000446 |
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| End bp | 1004430 |
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| Gene Length | 3985 bp |
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| Protein Length | 1036 aa |
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| Translation table | |
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| GC content | 59% |
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| IMG OID | 638258420 |
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| Product | Rab guanyl-nucleotide exchange factor, putative |
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| Protein accession | XP_572256 |
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| Protein GI | 58270200 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.762248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCCACACGCA GCCTCGACAC CATGGCGACC CTCGAGACGC TGCTGCCGCG CACGGGGCAG
CGGGTGACGG CGGTGCTGCA CCACGGTGAG TCTGCGCGTG CCTGCGCTGA GACTGACGCT
GTGCAGACGA GCGGCTCTAC CTCGGGCTGG GCAACGGCGG CGTGCTGGTG TATGCGGGCG
CCCCCCCCGC GCTCGTCGCG AGCCTCCCCC CCGCCCGGCG CCAGGTCGAC AGCCTCGCCG
TGCTCCCTGT GCGCGGCCTC CTCGCCGTCC TCGCCGACAC CGCCCTCGCC TTCTACGCCC
TCCCCGCCCT CGCCCCCGCC CCCGCCCCCC TCCCCCTCCC CCGCCACGTC CTCGCCCTCG
CAGCCACCGC CTACACCCCC CGCGAAGGCC CCCCCACCGA CCTCCTCGTC CTCGGCTGCC
GCAAAAAGGT CCTCCTCTAC GGCGCCCCCG CCCGCCCCTT TCCGACCCCT GCGAGCTCCC
CCTCCCCCAC TCCCCCGCCA CACCTCTTCC CCTCCGCCCC CCCCGCCCTG CCGAGACCGT
CCATCTTCTC TTCACCCCCA CCGCCTCCGC CATCCTCCAT CTTCACCCCG CATCCCCCTC
CGCGGCGCTT TTCCTCTTCG ACCTCACCAC CGATCCATTC CCCCCCGCTT CCCCCNNNNN
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNGACC
CCTGCGAGCT CCCCCTCCCC ACTCCCCCCG CCCATCCTCT TCCCCTCCGC CCCCCCCGCC
CTGCCAGAGA CCGTCCATCT CCTCTTCACC CCCACCGCCT CCGCCATCCT CCATCTCCAC
CCCGCATCCC CCTCCGCGCC GCTCTCCCTC TCCGACCTCA CCACCGATCC ATTCCCCCCC
GCTTCCCCCT CCACCGACGA CGGGCCCGAA CAGCAGACGC CCGGCGCGCC CGCTTCCGTG
GCGTACGGCA AGGGCGCCCT CAGCGGCCTC GGCGGGTATG TAGGCCTCGG CGCGCTCGGG
AGACAGCAGA GTCCTGTCGG CACACGCACA GTCGGCGGTG AAGTCTTGCT CGCGCGACAA
GGTGCGTTCA AAGCTCAAAA CCAAAGCTCA AGGCTAACCC GGGACAGACA CCGGCGTATT
CTACTCCTCC GAGGGCAACT ATACCAGACA GCGATCCGTC CACTGGCCAT CGCCTCCACA
CGGCATCGCA TTCTCAAACC CATACATCTA CTCTATCCTA CCCCCCTCTC TCACTCCATC
ACCCGCGTCG CCGCCCACAA CCCACATCCA GATCCACCTC GCACCTACCC TATCCCTCCG
CCAGACAGTG GCTATACCCC CTCCCGCTGC AGGAAGCTGG GGCACAGTCT CTTTCTGTGC
CGTTTCCTCG CATGCAGAGT CTACACCCAA ACTGCTCATC GCCACCTACC CGACAGACAA
ATCCCTCCAC TCGCAGGGAA GCGCCATCCA CCTCCTCTCG TCCCCACCCC TCCCGTCCGA
AGTCGAGCAC CTCTTGCTAG ACGGCCGCAT CGATGACGCC ATCGGGCTCG TCGAAGCTGT
CGGCGAGGCC GCCTTTGCGA CGACGAGCGT CCTGCGGCCC CTGGGACATC CAGATACCCC
ACCGCCGCCG CCACTCACCC ACCTCAAAAT CCTTCAAGCT GTCCAACTCT TCGCCCTCGG
ATCGTACCAA GCCGCCATGG AGGTGTTTGT CCTCTACAAC GTCAACCCTG CGCTCGTGCT
CTCGCTTTTC CCGGGGAAAA GTATTTCGGA AAAGCTGGGC GTGCGGAAGG AGGGGTGGAT
GGAGTTGTTT GGTGCGCCGC GGGGCGCGAG CCTGGGTGCG GGCGAGCAAA CACAAAGCGT
GCACGTAAAC GAAGAAAAAG GCGGCGATGC GTCCAGTGTA AAGAGTACAA ACACGAGTGT
AAAAGCTAGT CAAGGCGATG ACGAACGTAC GTCCCTCATT TATTACTCCA CACTAACCCC
CCGCAGCGCC CAAAGCAGCC CTCGAAGCAC TCATGTACTT TCTCTCCGAC CGCCGCCAAA
AGCTAACCGG CGCCATATCC GCCCTCCCCC CCTCCTCCCC GCTCCCCGCC GAATCCTCCC
TCCCCGCCTT CTCCTCCCTC CCCGCTCCCG CCCTCCACTC CCTCCCGTCC ATCATACCCT
TCGCCGAGAT GAGCCCGGAA GAACTGGTGA GGATGGCGCA GGTGGTGTAC ACCGGCTTGA
TGAGGGTCTA CCTCAAAGCG AGGCCGGTGT TGGTAGGCAG TTTGTGTAGG ATCGAGAATT
GGTGTGATGT CAAAGAGGTC GAGGGGTTGT TGAAGGAGGA AAGGGTAGGT TAAACCCCCC
CCCCCCCCCC CCCCGACGGG GTGATGGCTG ATTCAGTGGG TGATGTAGAA ATTCAGCGAT
TTGATAGATC TTTATCAAGG GAAGAAGATG CATAGAAAAG CGCTGACGAT GCTGCGCGAG
TAAGTTTTTC CCCTCCCTCC CCCCCATGAA CACCCCGCTC ATACCCACGG CAGACTGGCA
AAGGAAGAAG ACGATAAACT AGATCGCTAC CCGCCCACCA TCTCGTACCT ACACAAACTC
GGAGCAGCCG ATCTGGATCT TATTCTAGAA TCCTCGAAAT GGATACTGGA AGAGGATCCG
GGAATGGGTC TCACCGTACG TCTTGCTCTT CTCTTTCCTT TTTACACCAA ACAAAACCTG
AGTACAAACA ACAGATATTC ACGGCGGATG AACCCGAGAT TGAATCCCTC CCCCGGGACA
GGATCACATC CTTCCTCTCC TCCATCGACC GAGGAGCCTG TGAGGGTTAT TTGGAATATA
TCATCTGGAC CCTAGGCGAA AAGGGGGGCG AGTTTCATGA TACGCTTGCA GAGCTTTACA
TGGTTGATTC GCGAGTCAAA GTTGAGTCCG GAGCCGAAGC CGGGGCGTAC GATAAGCTGT
TGGCGTTCTT GAACGATTCG ACTCATTATA GACCGTATCG GGTGATGAAC AAGCTCTCTG
GCAAAGGTAC GTTCTCCCTT TCTTTTCTTT TTTTTAATGG TAGATGGTTA ACGTGATTGC
CGGGGAACAG AGATGCCAGA GGCAAGAGCG ATTCTTTTAG GAAGGATGGG CAAGCATGAA
GAAGCGCTCA AGATTTACGT GTACCGTTTA CAAGACTATG CCGCTGCTGA ATCGTGCGTA
AACTCTTCCC TAGCACTCTC GACACTAGCG TCGACGCTGA TGGATAAACA ACAGGTATTG
CGTTAAAGCT TACCAATCAA CAAACAACGT CTTCCTCCTC CTTCTCCAAC TCTATCTCCG
TCCTCCACCC CCTTTATCGC CATCCCCCAC ACCCAAACCC AAACCCACAC CCAAATCCAC
GCCCGCCTCC ACCCACCTAC CACCTGCTCT CTCCCTCATC TCCAAACACT CCACCTCCCT
CCCCCCCTCC TCCGTCCTCG ACCTCCTCCC CCCACTCGTC TCCATCGCCG ACATCCACCC
ATTCTTCATA AAGACTTTAC GGGAGGAACA CCGGCGTAAG CTCGAGGGAA GGGTGATGAG
GCAGCTCGGC AAGGGGAGGA AAGACGAGGT GGAGGAAATG TTGATGGGGT TGGAAGTCAA
GAGGGTGAGA GTGACGGATC AGAGAATGTG AGTATGCTCA GTTTGCATCG GATCGTCGAG
TGGGTTTTAA ACTAAAAACA CTAAAAATAG ATGTCCGCAA TGCCACAAGA GACTGGGCAT
GTCTGCCATT GCAGTGCACG CGCCAAGGTA AGTCAAGTCA CAAGAGAGAG AAAAAACCGC
CGGGCTGACA GAGCATGAAT GTAGAGGCGA AGTGACGCAT CTCCATTGCA AGGACAGGTT
TAGTGCAAAG CTGGCTGCTT CCAGAGAATA GTAGCTCTTT TCTTTCAATC CTATAGTTGT
AATACCCAGC ATCCACTTGC TACTAAATGT CTTTTCTCCA AGCGTCGAAA TGTACAAATA
TATCTAGCCC GGGACAATGC ATCAC
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| Protein sequence | MATLETLLPR TGQRVTAVLH HDERLYLGLG NGGVLVYAGA PPALVASLPP ARRQVDSLAV
LPVRGLLAVL ADTALAFYAL PALAPAPAPL PLPRHVLALA ATAYTPREGP PTDLLVLGCR
KKVLLYGAPA RPFPTPASSP SPTPPPHLFP SAPPALPRPS PSPLPPPILF PSAPPALPET
VHLLFTPTAS AILHLHPASP SAPLSLSDLT TDPFPPASPS TDDGPEQQTP GAPASVAYGK
GALSGLGGYV GLGALGRQQS PVGTRTVGGE VLLARQDTGV FYSSEGNYTR QRSVHWPSPP
HGIAFSNPYI YSILPPSLTP SPASPPTTHI QIHLAPTLSL RQTVAIPPPA AGSWGTVSFC
AVSSHAESTP KLLIATYPTD KSLHSQGSAI HLLSSPPLPS EVEHLLLDGR IDDAIGLVEA
VGEAAFATTS VLRPLGHPDT PPPPPLTHLK ILQAVQLFAL GSYQAAMEVF VLYNVNPALV
LSLFPGKSIS EKLGVRKEGW MELFGAPRGA SLGAGEQTQS VHVNEEKGGD ASSVKSTNTS
VKASQGDDEP PKAALEALMY FLSDRRQKLT GAISALPPSS PLPAESSLPA FSSLPAPALH
SLPSIIPFAE MSPEELVRMA QVVYTGLMRV YLKARPVLVG SLCRIENWCD VKEVEGLLKE
ERKFSDLIDL YQGKKMHRKA LTMLRELAKE EDDKLDRYPP TISYLHKLGA ADLDLILESS
KWILEEDPGM GLTIFTADEP EIESLPRDRI TSFLSSIDRG ACEGYLEYII WTLGEKGGEF
HDTLAELYMV DSRVKVESGA EAGAYDKLLA FLNDSTHYRP YRVMNKLSGK EMPEARAILL
GRMGKHEEAL KIYVYRLQDY AAAESYCVKA YQSTNNVFLL LLQLYLRPPP PLSPSPTPKP
KPTPKSTPAS THLPPALSLI SKHSTSLPPS SVLDLLPPLV SIADIHPFFI KTLREEHRRK
LEGRVMRQLG KGRKDEVEEM LMGLEVKRVR VTDQRICPQC HKRLGMSAIA VHAPRGEVTH
LHCKDRFSAK LAASRE
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