Gene CNH00610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00610 
Symbol 
ID3259071 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp1007974 
End bp1010527 
Gene Length2554 bp 
Protein Length397 aa 
Translation table 
GC content49% 
IMG OID638258423 
Producthelicase, putative 
Protein accessionXP_572253 
Protein GI58270194 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGTTAACTGC CCTATCTGTA ACATCTCGGT ACCCGAGGGC GACATCAACC TCCATCTCGA 
CCTCAAATGC AAAGGGGCTC CCCCAGCTGA ATTATCTACT CCACAACAAG TATTCGATTT
CACGAGCTCA CTACATCCGA AGACCCAACC ATCAACCTCC CAAACCTCTC CATCGACCCA
TCCCGGGAGC AGTCAAAGAG CGAGAGCTAG CCAAGCGAAC TTAGATGAGC GGAGGGCATC
TGTGGGGGCT GATGGGAAGA AGAATATAGC GCCAGTTTTT CAAACGCAAG GAGCTGTTAC
GAAGAGGAAA GCGGAGGGGA AGGAAACAAA AGTGATTGGT GGTGATGGAT TTGGAGGGGG
TAAGGGGGCG AAGCAACGGC GGGTGAATCC CTTAGCTGCT GCTCAACCGT GAGCCTTTGG
TAATCTCACA GAGAGGAGAA AGGGAGAGAG AGCGTAGCTT ACATAAACTG TAGCTTGGCG
GAACGATCAA GACCTTCAGA GATATCACAG TATATCGGAC AGTCAGATAT AGTCGGTTTA
GGAAGTCTGT TACGGGTCCA AATTGAAGCA GGCAAGCTGG TGGGGAGCTG TATACTATGG
GGACCACCAG GGTGTGGGAA AACGTAAGCA TCATACTTTA AGATAAGGTA CACGTGCTCA
ACGACGTTAT ACGTTAAATA GAACGTTGGC CAGGCTGATT GCAAAGTCTT CTGGAGCAGA
CTTCAAAGAA CTTTCCGCGA CAAGGTGCGC GGTATTGCCA TTGTGTTAGC GTGTGTCTGA
TCGAACTTGC GTAGTTCGGG TACTCAAGAC GTTCGGCAAG TTTTTGAAAA GGCTAAGAAT
GGACTGCAGA TGACTGGAAG GTAAGCCTTC TGTCTGTTGT TGTAGTGACT CCAACTGATC
GTATCGCAGA CGGACTGTTC TAATGATCGA TGAGATACAT CGGTAAGCAA CTGGCCTCAT
CTTCTCAAGA CCAAGGTTGA TAGTTGGTCT TACAAATAGA TTTAACCGTG CCCAGCAAGA
TCTGCTACTA CCTTACGTTG AAAAAGGTTG GATACAGCTT ATAGGGGCTA CCACCGAAAA
CCCTTCATTC AAGGTCAACG GTGCTTTGCT TAGTAGATGC CAGTGAGTTG ACCGTTCATA
CCTTTCGTTA GTCATGAAGC CTGATCTCTG TCAGAGTGTT TACATTACAC GCCCATTCTC
CTGAATCCCT TCAAATTATT CTACGCAATG CCGTGCAAAC CATCTCTGAA TCCGAACCCA
TCCCTTATCT CCCATCAGGG CTCATCCCTT TCCTTGCGGA TGTTGCAGAT GGTGATGCCC
GTCAAGCACT TAACGGTCTC GAGCTCGCTC TGCGCACGTG TCAAACAATG GACGAGACTG
CCAGCGCGGA AAAAGCACAA CGGGTCAATT CCGCCAGTGG TGAAAAAATG GAAAAAGAGG
GGCAAAAAGA CGAGTTCGAT GCGGCGGTTG AGGAAGCGGA GGAGGACTAT CAGAAGAAGA
AGAGAGACGA GGAGATTATG GATGCTGTGA GGCGAGGATT GCAGAAAGGG TATAATAGGA
CGGGAGAAGA GAGATATGAT ATGATTTCGG CGCTGCACAA ATGCTTGAGA GGATCGGACG
GAAGTGCAGC AATGTACTGG CTGGCTAGGT ATGTTCAAGG TCATATTTCT GTGTGGTTTC
CGTGGCTAAC AATCCTTTAG GATGATTACC GGCGGGGAAG ATCCCTTATA CATAGCCAGA
AGGTTAATCG TAGTGGCGAG TGAGGACGTA GGCCTGGCAG ATAACCATGC GCTGCCACTG
GCTATGGCTA CATATCAGGC TTGTCAAACG ATCGGTTTGC CCGAATGTCG AATTAATCTT
GCCGTAAGTT CATAAAGCAC TTTTCCTCGG TATTGTACGC TTGGCATACT GATAGGATGG
TTGCCAGCAT TGCGTCGCAT ATCTGGCTGA AGCTCCCAAG TCAACAAGAT CCTATAAGGC
TTATGCTGCA GTAGGTCATA GAGGGAAATT CATGGATACA CATTTTGCTC ACGACCTTGT
TATAGGCAGA ACAGCTGGCA ACTATGCCGC CTTTACCTGG CGTTCCTTTA CAAATCCGCA
ACGCTCCTAC CCAACTCATG AAGAAGTTGG GTTACGGGAA GGAATATGCG TACAACCCAG
ATTATGGTCA TCCAGTTCAT AATGTGAGTC CGTCAGGCTA ATTACGTTGA CCCTCGTCCC
TGACTTGCTT TCTATATAGG ACTACTTACC TGAATCCCTT CTGCAACATT CTTCGCACTC
TCATGATCCA AGTCAACACA TTCTCAAGAC AGCGGACCAG TTTGAGGCGG ACAAGAAATG
GGACGAGGAG CATCTTGATG AGTGGGAGAG GGTGGTGAAC GACGGTGTAG CTTGGGAAGG
GAGATATGAG CGATTTGGTG AGATATAATG GTGTCAACGT TAGAGTTTGA GCCTCAGCTT
ATATCTGGCC CCCGGCGCGG GCCATGTGTC GGAGTTGAGG AATAAGGCGA CTGACTGTCC
CTAAGTATAT TTGTATTGTA GCCCAACTCG AGCA
 
Protein sequence
MTGRRTVLMI DEIHRFNRAQ QDLLLPYVEK GWIQLIGATT ENPSFKVNGA LLSRCQVFTL 
HAHSPESLQI ILRNAVQTIS ESEPIPYLPS GLIPFLADVA DGDARQALNG LELALRTCQT
MDETASAEKA QRVNSASGEK MEKEGQKDEF DAAVEEAEED YQKKKRDEEI MDAVRRGLQK
GYNRTGEERY DMISALHKCL RGSDGSAAMY WLARMITGGE DPLYIARRLI VVASEDVGLA
DNHALPLAMA TYQACQTIGL PECRINLAHC VAYLAEAPKS TRSYKAYAAA EQLATMPPLP
GVPLQIRNAP TQLMKKLGYG KEYAYNPDYG HPVHNDYLPE SLLQHSSHSH DPSQHILKTA
DQFEADKKWD EEHLDEWERV VNDGVAWEGR YERFGEI