Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH00610 |
Symbol | |
ID | 3259071 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | - |
Start bp | 1007974 |
End bp | 1010527 |
Gene Length | 2554 bp |
Protein Length | 397 aa |
Translation table | |
GC content | 49% |
IMG OID | 638258423 |
Product | helicase, putative |
Protein accession | XP_572253 |
Protein GI | 58270194 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGTTAACTGC CCTATCTGTA ACATCTCGGT ACCCGAGGGC GACATCAACC TCCATCTCGA CCTCAAATGC AAAGGGGCTC CCCCAGCTGA ATTATCTACT CCACAACAAG TATTCGATTT CACGAGCTCA CTACATCCGA AGACCCAACC ATCAACCTCC CAAACCTCTC CATCGACCCA TCCCGGGAGC AGTCAAAGAG CGAGAGCTAG CCAAGCGAAC TTAGATGAGC GGAGGGCATC TGTGGGGGCT GATGGGAAGA AGAATATAGC GCCAGTTTTT CAAACGCAAG GAGCTGTTAC GAAGAGGAAA GCGGAGGGGA AGGAAACAAA AGTGATTGGT GGTGATGGAT TTGGAGGGGG TAAGGGGGCG AAGCAACGGC GGGTGAATCC CTTAGCTGCT GCTCAACCGT GAGCCTTTGG TAATCTCACA GAGAGGAGAA AGGGAGAGAG AGCGTAGCTT ACATAAACTG TAGCTTGGCG GAACGATCAA GACCTTCAGA GATATCACAG TATATCGGAC AGTCAGATAT AGTCGGTTTA GGAAGTCTGT TACGGGTCCA AATTGAAGCA GGCAAGCTGG TGGGGAGCTG TATACTATGG GGACCACCAG GGTGTGGGAA AACGTAAGCA TCATACTTTA AGATAAGGTA CACGTGCTCA ACGACGTTAT ACGTTAAATA GAACGTTGGC CAGGCTGATT GCAAAGTCTT CTGGAGCAGA CTTCAAAGAA CTTTCCGCGA CAAGGTGCGC GGTATTGCCA TTGTGTTAGC GTGTGTCTGA TCGAACTTGC GTAGTTCGGG TACTCAAGAC GTTCGGCAAG TTTTTGAAAA GGCTAAGAAT GGACTGCAGA TGACTGGAAG GTAAGCCTTC TGTCTGTTGT TGTAGTGACT CCAACTGATC GTATCGCAGA CGGACTGTTC TAATGATCGA TGAGATACAT CGGTAAGCAA CTGGCCTCAT CTTCTCAAGA CCAAGGTTGA TAGTTGGTCT TACAAATAGA TTTAACCGTG CCCAGCAAGA TCTGCTACTA CCTTACGTTG AAAAAGGTTG GATACAGCTT ATAGGGGCTA CCACCGAAAA CCCTTCATTC AAGGTCAACG GTGCTTTGCT TAGTAGATGC CAGTGAGTTG ACCGTTCATA CCTTTCGTTA GTCATGAAGC CTGATCTCTG TCAGAGTGTT TACATTACAC GCCCATTCTC CTGAATCCCT TCAAATTATT CTACGCAATG CCGTGCAAAC CATCTCTGAA TCCGAACCCA TCCCTTATCT CCCATCAGGG CTCATCCCTT TCCTTGCGGA TGTTGCAGAT GGTGATGCCC GTCAAGCACT TAACGGTCTC GAGCTCGCTC TGCGCACGTG TCAAACAATG GACGAGACTG CCAGCGCGGA AAAAGCACAA CGGGTCAATT CCGCCAGTGG TGAAAAAATG GAAAAAGAGG GGCAAAAAGA CGAGTTCGAT GCGGCGGTTG AGGAAGCGGA GGAGGACTAT CAGAAGAAGA AGAGAGACGA GGAGATTATG GATGCTGTGA GGCGAGGATT GCAGAAAGGG TATAATAGGA CGGGAGAAGA GAGATATGAT ATGATTTCGG CGCTGCACAA ATGCTTGAGA GGATCGGACG GAAGTGCAGC AATGTACTGG CTGGCTAGGT ATGTTCAAGG TCATATTTCT GTGTGGTTTC CGTGGCTAAC AATCCTTTAG GATGATTACC GGCGGGGAAG ATCCCTTATA CATAGCCAGA AGGTTAATCG TAGTGGCGAG TGAGGACGTA GGCCTGGCAG ATAACCATGC GCTGCCACTG GCTATGGCTA CATATCAGGC TTGTCAAACG ATCGGTTTGC CCGAATGTCG AATTAATCTT GCCGTAAGTT CATAAAGCAC TTTTCCTCGG TATTGTACGC TTGGCATACT GATAGGATGG TTGCCAGCAT TGCGTCGCAT ATCTGGCTGA AGCTCCCAAG TCAACAAGAT CCTATAAGGC TTATGCTGCA GTAGGTCATA GAGGGAAATT CATGGATACA CATTTTGCTC ACGACCTTGT TATAGGCAGA ACAGCTGGCA ACTATGCCGC CTTTACCTGG CGTTCCTTTA CAAATCCGCA ACGCTCCTAC CCAACTCATG AAGAAGTTGG GTTACGGGAA GGAATATGCG TACAACCCAG ATTATGGTCA TCCAGTTCAT AATGTGAGTC CGTCAGGCTA ATTACGTTGA CCCTCGTCCC TGACTTGCTT TCTATATAGG ACTACTTACC TGAATCCCTT CTGCAACATT CTTCGCACTC TCATGATCCA AGTCAACACA TTCTCAAGAC AGCGGACCAG TTTGAGGCGG ACAAGAAATG GGACGAGGAG CATCTTGATG AGTGGGAGAG GGTGGTGAAC GACGGTGTAG CTTGGGAAGG GAGATATGAG CGATTTGGTG AGATATAATG GTGTCAACGT TAGAGTTTGA GCCTCAGCTT ATATCTGGCC CCCGGCGCGG GCCATGTGTC GGAGTTGAGG AATAAGGCGA CTGACTGTCC CTAAGTATAT TTGTATTGTA GCCCAACTCG AGCA
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Protein sequence | MTGRRTVLMI DEIHRFNRAQ QDLLLPYVEK GWIQLIGATT ENPSFKVNGA LLSRCQVFTL HAHSPESLQI ILRNAVQTIS ESEPIPYLPS GLIPFLADVA DGDARQALNG LELALRTCQT MDETASAEKA QRVNSASGEK MEKEGQKDEF DAAVEEAEED YQKKKRDEEI MDAVRRGLQK GYNRTGEERY DMISALHKCL RGSDGSAAMY WLARMITGGE DPLYIARRLI VVASEDVGLA DNHALPLAMA TYQACQTIGL PECRINLAHC VAYLAEAPKS TRSYKAYAAA EQLATMPPLP GVPLQIRNAP TQLMKKLGYG KEYAYNPDYG HPVHNDYLPE SLLQHSSHSH DPSQHILKTA DQFEADKKWD EEHLDEWERV VNDGVAWEGR YERFGEI
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