Gene CNH00570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00570 
Symbol 
ID3259326 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand+ 
Start bp1020614 
End bp1021351 
Gene Length738 bp 
Protein Length204 aa 
Translation table 
GC content50% 
IMG OID638258427 
Producthypothetical protein 
Protein accessionXP_572251 
Protein GI58270190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.118512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGAG AAGACCATAA GCAGGACTCT GGCCTGTGGG TATTCTCATA ATCCTCCCAA 
AATCACGACT AACCTTCATT CCCAAACCAG TCGTGCACTC CGAGCCCACC TTAATACTCG 
GCCTGATCTC CTGCTTGGTG AGCCTCATTT TATCTTCATT TCCACCTTTA GCAAACTCAC 
AGCCACATTG CGGGCAGCTA TTGCCATGCG TCATGCCACC AATCCCCTTC TTCACCCCGC 
CCCTGACCCA CTAACCAAGA GTCCTACCCA AACACCTCCC AGCCTTCGCC TCTCTGTCCC 
GCACGGTAGC CCTACTTACG ACGCTCTTGG TATCAAACTT CGTACTAAAG CCCGTGAGGT 
CGATGTCGAC ATTCCGCTCC AATCTACGGC AAAGACTGCG AGTGAAGTGA AGCAGGCAAT 
TGATAAGATG GGCGAAGATG CGTTGAAATA CTACAAGGTT GTGAGTTGTT ACGCGTAGAC 
TCTTTCTGTC TGGTGAGATG CAACGATATA ACTGACATCG ATGATCAGCC CAAAGACCCC 
CAGGTCAATG TATTCGTCCC TCCCAAGTTT ACTCACACCC TCGTCCTGCT ACCTCTCGCT 
CTTCTCATTT ACCTCGCGGC CGCGCCTTCT ACTTCAAACG CCGCCAACGC GGGTAGGGCG 
TTGGTTAGCA AATATTTGAG TGACTACATG ATTCCTGCCT CACTGATATT TTCTTTTGCT 
TGTGTAAGTC CGATATAA
 
Protein sequence
MTREDHKQDS GLRALRAHLN TRPDLLLGEP HFIFISTFSK LTATLRAAIA MRHATNPLLH 
PAPDPLTKSP TQTPPSLRLS VPHGSPTYDA LGIKLRTKAR EVDVDIPLQS TAKTASEVKQ 
AIDKMGEDAL KYYKVPKDPQ VNVFVPPKFT HTLVLLPLAL LIYLAAAPST SNAANAGRAL 
VSKYLSDYMI PASLIFSFAC VSPI