Gene CNH00360 details

Gene Information

• Locus tag: CNH00360
• ID: 3259232
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: +
• Start bp: 1088719
• End bp: 1090933
• Gene Length: 2215 bp
• Protein Length: 540 aa
• GC content: 50%
• IMG OID: 638258450
• Product: conserved hypothetical protein
• Protein accession: XP_572228
• Protein GI: 58270144
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3774] Mannosyltransferase OCH1 and related enzymes

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCGAGATCC GTTATTATCC CACTGTGAAT GGCCTCAAAG TCATCCTCTA TACATCCGTA 
CTCCCCGCTA GCCTATCCCC GCCGCCGCAC CTCGCTTTCC GTCGCCCTCA ATTCCCATCC 
TCTCCAGCCC CCCTATCCCT ACTCTTATCC CTCCCACCGC CGACGAGCTG GCACAATGCC 
CAGCCAACGC ACAAGACGTT CCCGCGACAC ATCCACAAGC CTCACACGCA AAACAGTCAT 
CGCCTTCCTC GTCATCCTTT CCCTCGTCCT CCTCGGCACG GTTATCGTGC TTTCCACAGT 
ATCATACTAC CTCGCCATCC CCTCATGGGC CTATCTCACA GAGACTGAAG TTGCCTGGAG 
AGCAGAAGAT GTCATCAAGC CTCTTCTTGA ACAACCTAGA CCGAAACTGT CGAAACGAGT 
GCAATGGGGA GAGCTCGATA GCGATGTCCT CTCCTACAGC TCGACGGGTG CTGCTGCGTC 
CGCTTCCACC ATCTCTGTCG ACTCTGCCAC CATGACTGCC GAAACTTGGG ACGAGTTCAA 
GGAGGAGATG GAGGAGCTTG ATGCCGCTGA AGAGGTCGAT GAAGATAATG CCACACAGCC 
TGAAAGTGAA GCTGTCGACA CAGATCCTAC CGCCACCTCA TCTATCGAAG AAGATAATGG 
TCAGTGGGGG ATTGATGGCA TGGGCACTGG TTCATACTGG ATGCGAAACG ACTGGGACGG 
GCGTGTGCGG GACACCGATA GCTGGGAAAG GCTGTACAAT GTTACCAACA GGTGAGTTCA 
TCTCATTGGG GTATCGGCTG CGCTTTGCAG TGTTCCATCA TGGTGCAATT GGGTCGTCTT 
TCTTCTTTTG TGCTCGGTCC TCTTGGAGTC GTTCGACGAT ATCAACGGGT TCCATTTTAC 
TTGACTCAAT CTCCTACTTT CATTAAATCC TGTTGAAGCA ACGTGGTCGA TTACCCCGAA 
TAACTCTCTT CACAAACGAA TATGGCTGAC ATGGCATCTG TAGGCCAGGA GAAAACATCC 
CTAGGTTGAT TCACCAGACA TGGAAAGACG ACCAGCTACC CGAGAAGTGG AGAAAGGCTT 
GGAAGGAATG CAGAGAAGGC ATGCCCGACT AGTGAGTACT TATACAAGAA GTATTGGCAA 
ATGCTAATAA TCTACAGCGA GTACATGCTT TGGACCGACG ATCTCTCTCG AGAATTCATT 
GCCAAGCACT ACCCGGCTCA CCTTCACATG TACGACTCTT ACGAGTTCCC TATCCAGCGA 
GCGGATTCTA TCAGGTACTT TATCCTCCAC CACTTTGGCG GTGTCTACAT GGACCTTGAT 
ATCGGCTGTC GAAGACGTTT GGACCCTCTC TTGCAAGGTG ATTGGGAGGT CATCCTTCCT 
ATCACCAAGC CCGTCGGTAT CTCCAACGAC TTGATCTTTT CGTCCAAGGG TTCTGCATTC 
ATGGACGGCA CTGTCCACGG TCTTGCGGCT TTCAACCACA AGTACTTCTC CAACTACCCT 
ACTGTCATGT TCTCTACCGG GTAGATATCT TGCTTGACAG TCACGAGACA AACGCTGATG 
TACCCCAGGC CCATGTTCTT GTCCGCCCAA TATGCCATTT TCTCCGCCTC ACACCCCCTC 
ACCGAGTCTC ACCCTCGTTC TGAGATCCGT GTCCTCCCCA AGTCTCTTTA CGGGAAGAAT 
GCCCCCATCT CTGACGTGCC CCACTCCTTC TTCTCTCACT TCTACGGTTC TTCATGGCAC 
GCGGACGATG CTGGCTTTAT CACGTTCTTG GGCCATTGGG GCAAGAGACT TATGTGGATT 
GGCGTCGTAA TCCTCATTTG TGGTGCCATT CGTCTGATCT GGGTCAAGCG CAAAGCAGCG 
GCTGGACATC AATACCAACT TCTCTCCATC TTACCCACCA CACGCTCCCC TTCACCTTCT 
GGTTATGACA CAGTAGAGGC CAGCAAAACA TGCGCAGGTA GTATACATGT GTCATGAGTG 
CTAAGGAACT ACAACAAACT ATTAGAAAGA TTCCCTAGGT ACAGCAAGGG AACAAACGTT 
AAGTAAAAAC TAGTGATGCC CGCGAAAGAC TTCGCGCAAA GGGTTTTGGG TAAATTAGTT 
CAATTGCATC AAGTTAATTT TGGGAATCAC ATTCAGTTTT GGGTGTTATG TTATTGAGAA 
TGTACGTATT CGTTCAAGTG TGTGGTATTA TGATGCATTT ATTTATGATG CACTT 

 

Protein sequence

MASKSSSIHP YSPLAYPRRR TSLSVALNSH PLQPPYPYSY PSHRRRAGTM PSQRTRRSRD 
TSTSLTRKTV IAFLVILSLV LLGTVIVLST VSYYLAIPSW AYLTETEVAW RAEDVIKPLL 
EQPRPKLSKR VQWGELDSDV LSYSSTGAAA SASTISVDSA TMTAETWDEF KEEMEELDAA 
EEVDEDNATQ PESEAVDTDP TATSSIEEDN GQWGIDGMGT GSYWMRNDWD GRVRDTDSWE 
RLYNVTNRPG ENIPRLIHQT WKDDQLPEKW RKAWKECREG MPDYEYMLWT DDLSREFIAK 
HYPAHLHMYD SYEFPIQRAD SIRYFILHHF GGVYMDLDIG CRRRLDPLLQ GDWEVILPIT 
KPVGISNDLI FSSKGSAFMD GTVHGLAAFN HKYFSNYPTV MFSTGPMFLS AQYAIFSASH 
PLTESHPRSE IRVLPKSLYG KNAPISDVPH SFFSHFYGSS WHADDAGFIT FLGHWGKRLM 
WIGVVILICG AIRLIWVKRK AAAGHQYQLL SILPTTRSPS PSGYDTVEAS KTCAGSIHVS