| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH00280 |
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| Symbol | |
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| ID | 3259037 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | - |
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| Start bp | 1105537 |
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| End bp | 1108196 |
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| Gene Length | 2660 bp |
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| Protein Length | 772 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638258458 |
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| Product | ATP dependent RNA helicase, putative |
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| Protein accession | XP_572221 |
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| Protein GI | 58270130 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATAGTATCCC GGAGTTATTT CATCGATCAT GGCGAAGATT GACAAGAAGA CCAAGCTCAA
GCTCAACAAG AAGTCTGTGA GAGCCCCATC TAAGCCTACT ACGGAGAAGA AGCCCAAAAA
GTATGTTACG GCCGACACGC TCACATGGAA GCCCGTCAAA ACTTCAAGCT TTTCTGGCAT
CGACGGTGGG GGCGGTATGA TGATGCTTGA GGAGCTCGAA GATGTTGGGA TTGAGTGGGA
AGAGACCGAT GGTGGGAGAA AGATTGCAAA ATTTGTCGAA GTGGAAAGCA AGACGAGTAA
GGGCAAGAAG AACGCCGCGC AAGAGGAACC CAATCAAGAA GGGCGAGGAG ACGATGAGAA
AGCCTCTTCA GCAAGTGAAA CTGAGGAAGG TAAAAAGGCC GATGACAAAG AAGCCGTTGA
GGAGGATGAT GAAGAAGAGT TCCCCGATTT CGCTGGGTTC GCTGAAGAGG ACCTCAACGC
TGCAGACGAG GAGGAACATC CCAATTTAGA CGACGAGCCT GCTTTCAACG GTATGTACAT
GTTTGATGAT ATAGCTAGTA CTGATAGATC CCCAGATGAC CTTCTCCCGG AATGGTCTTC
TATTTCCCTT CATCCCTCCC TCAAGCGTTC TTTCCTTGCA TCCAGCTTCA CCGCTCCTAC
TGCCATCCAA TCTCGAGCCA TCCCCGCTGG AATTACTGGT CGAGACGTCG TTGGTGTCGC
GGAAACCGGT TCCGGTAAAA CACTCGCTTA TTCTTTACCC ATCCTCCATT ATCTCCTTGG
CCAACGCAAA TCGAAAGCTG GCATCAAGCG CCCCTTGTCC GCTTTAGTCC TTTGTCCTAC
AAGAGAACTT GCTCTGCAAG TGATGGACCA TCTCAATGCC TTGTTGAAAC ATGCACTCGC
CACTCCAGAT GGGGAGAAAC CGCAAGGCCC ACCTAGAGTC AGCGTTGGCT CTGTCGTTGG
TGGTCTAAGT GCGCAAAAGC AGAAGAGAAT TTTAGAGAGG GGATGTGATG TCATTGTTGC
GACTCCTGGC CGGTTATGGG ACCTCATCAA GGCTGTGAGT CCATCTACTG TTGGTTTGGC
GCTTTTGGCT TACATATTTG TAGGATGATG AGCTCGCGAC GAGTGTCAGG ACATTAAGAT
TTTTGGTTAT TGATGAGGCG GACCGAATGA TTGAGAACGG ACACTTTGCA GAGTTGGAGA
GTATCGTCAA ACTTACTCAA CGTTCTACCG CGTAAGCCCT CCTTGTATTT CGGATCGACC
GTGGCTAATG TGTTGAAACT AGCCAACAAG GCCCTGATGA TGATGACCCC GTATTCCAAG
CTATGGCTAC TCTCTTTGAA GAGTCAACGG CTAGGGAGGA CATGCAGACG TTTGTTTTCT
CCGCTACTCT TTCCAAGGAT TTGCAGAAGA ACCTCAAGAG GAGAAGCAGA TCTTGGAAAG
GGAAAGGAAA AAGGTCATCT ACTCTTGGTA AGTTCACATG GGTCCTTTTT AGACCATAGC
TATTAGACCA TAGCTAATGT TACTGTAGAG GATTTGGTGG AGAAGCTTGA TTTTAGAGAT
GAGAACCCCG AAGTTATTGA TTTGTCCCCC GAAGGAGGTG TCGTTTCCTC ATTGAGGGAG
AGTATGATCG AGTCTACAAA GGACGACAAG GTATGCAATC TCATCCACTT GCAATGAGCT
AATTTAATAC CTCATGCAGG ATCTCTATCT CTATTATTTC CTTCTCCGAT ACCCTGGCAG
ATCTATCGTC TTTGTTAACT CTATCGACTC TATCCGTCGT CTTCTCCCCC TTTTCACTCT
CCTCCAACTT CCCGTTTTCC CTCTTCACTC CCATCTCCAA CAAAAGCAGC GTCTTAAGAA
CCTCGACCGA TTCAAATCCA ACCCCAAAGG TATCCTGATT GCAACCGACG TCGCTGCGCG
AGGTTTGGAT ATCCCCCAAG TTGATCACGT TGTTCACTTC AACCTGCCCC GAACGGCGGA
CGCGTACATT CACCGATCAG GTCGTACTGC TCGAGCCCAA AATGAGGGTT TCGCATTACA
ACTTGTGTCT CCGGATGAAA AGTCTGTCCA GAGGGCATTG ATGAAGAGCC TTGAGCGAAC
GCATGAGCTA CCCGATCTGC CTATCGAAGC CGGTTTCCTT CCTTCTCTTC GTGAGCGACT
GAGAGTGGCG ACTGAAATTG AGAAGGCACA ACATCGAGCG ACCAAAGCAA CTCACGATAA
AAACTGGTTA CTCGAAGCTG CCGAGGCCAT GGATATTGAT ATCGACCCTT CCATGCTCGA
TGGAGAAGAC GATGATCCCG ATGCTCCTTA TTATAAACCT AAGAAGCAGG ATAGGGGCAA
AGGCAAAGCA TCTGTGGAGA ATTTGAAGAT GGAGTTGAAG GCTTTGTTGC AGGAGAAGCT
TGTCGCAAGG GGTGTGTCGA TCAGGTATCC GACAAGTGGA AGTAAAGTCA TCGTGGATGA
CCTAATCAAA TCAACCGGTG AGTTTGTCCC CCCTCTTTAT AAATCCTGTC TCACAGAAGG
CTGATAACCA TATAGGTCAC GGGATGTTGT TGGGTGCAAG CACTAGCAAA GCTTACGACC
AAGTGGAGAA GACTGGGAAG AGAAAATTAG GATCTGGGAG ACCTGGAGCT GTCAAGAAGA
AAAAGGTGGA GGGCCGATGA
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| Protein sequence | MAKIDKKTKL KLNKKSVRAP SKPTTEKKPK KYVTADTLTW KPVKTSSFSG IDGGGGMMML
EELEDVGIEW EETDGGRKIA KFVEVESKTS KGKKNAAQEE PNQEGRGDDE KASSASETEE
GKKADDKEAV EEDDEEEFPD FAGFAEEDLN AADEEEHPNL DDEPAFNDDL LPEWSSISLH
PSLKRSFLAS SFTAPTAIQS RAIPAGITGR DVVGVAETGS GKTLAYSLPI LHYLLGQRKS
KAGIKRPLSA LVLCPTRELA LQVMDHLNAL LKHALATPDG EKPQGPPRVS VGSVVGGLSA
QKQKRILERG CDVIVATPGR LWDLIKADDE LATSVRTLRF LVIDEADRMI ENGHFAELES
IVKLTQRSTA QQGPDDDDPV FQAMATLFEE STAREDMQTF VFSATLSKDL QKNLKRRSRS
WKGKGKRSST LEDLVEKLDF RDENPEVIDL SPEGGVVSSL RESMIESTKD DKDLYLYYFL
LRYPGRSIVF VNSIDSIRRL LPLFTLLQLP VFPLHSHLQQ KQRLKNLDRF KSNPKGILIA
TDVAARGLDI PQVDHVVHFN LPRTADAYIH RSGRTARAQN EGFALQLVSP DEKSVQRALM
KSLERTHELP DLPIEAGFLP SLRERLRVAT EIEKAQHRAT KATHDKNWLL EAAEAMDIDI
DPSMLDGEDD DPDAPYYKPK KQDRGKGKAS VENLKMELKA LLQEKLVARG VSIRYPTSGS
KVIVDDLIKS TGHGMLLGAS TSKAYDQVEK TGKRKLGSGR PGAVKKKKVE GR
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