Gene CNH00270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00270 
Symbol 
ID3259004 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp1108410 
End bp1109876 
Gene Length1467 bp 
Protein Length352 aa 
Translation table 
GC content45% 
IMG OID638258459 
ProductDNA repair-related protein, putative 
Protein accessionXP_572220 
Protein GI58270128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0902227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGAG ACGCTATAAC GAATGCGGCA GGTACTGTCG AATCGACTCT CCTCCATCAG 
GTGTTCATCC AGTCATTACT CTCCCGACGT GTTGTCTCCG AAGCCATTGC GCTCGAACTT
TATAAACGCG CTGTCACGGC AGTCCGCGGT ATGTCTTTTG TATGTCAATA TAGACAATGC
TCAATTAAAA TTATGCAGCC TACGACAGAC AGTTTAATCC TCCGTACGCT ATAAGCGGTC
ATGGAGTGGC AAGTTTCGTG ACCGACGTGT CGACTTTGCT GCACAGTGTG AGCTTGGAAG
TAATTCGAAC TATCGATCAG CGATCCGATC GAGCCTTTTT TGTGCTTGTG AGTCCTGTCG
GATGACACTG TTTAGATTAT AAAGCTGACC ATGGATGGCT AGAGAAACCT GGATGCTTCG
GAGGTTGCGT CATTTGCAAC TGACCTCAAC TCGATGGAAG TTGAATACTT ACGCAACCTT
GTAAATCCAT TTTTTTCCTA CAGTTTCCTA AATTTGACAC TTTAATTCGC ACAGATTGAA
AGTATTGTCG TTTCATACCC TGCCAACTCA TTGGCTATTG GCCAAGCGCG TGATGTCATC
AATGACTCTC CTCTTACTCA GCATAAGATG ACCAAGTCCC ATGCTGAGAG TCTGCTTGAC
GCATTAGTCT CTAGAGGGTG GCTTTACAAG TCTAAGTAAG TTTAACATAT CCTCCATTTA
TTAGATAACT AGGACTCATA CGTATGATAG GCGAACGAGG TTTTCATTGG GTGTTCGAGC
ACTCGCTGAA CTTGAAACAT ACCTCAAGAA CGAGTTTGAT CAGTATGTGA AGTCATGTGC
ACAATGTAGG CGTGTGGTGA CCGAAGTGAG CCACCTTTTC CTCGCGGTTC ATATTTTTGT
ATCTAATGCC ATGCTATTCA CAGGGTCTTG CCTGCTCTAA TGTGGGTTGC GACTGTCACA
TTCATAACAC TTGCTATGCC CGCAACATCC AACAATTAGC CAACCCTGTC TGCCCAAGCT
GTTCATCGAG TTTCCGTGAT CTTGCGCCTA AACCTGTCGG TGAAAAAGCA GTATCGATTA
TGGAGGACAA TTTCAAAGGT GGTAGGAAGA GAAAAGGGAA AGGAAAGAAT GTTGGGGATA
TGGATGATGA AGGTGAGGAA GAAGAGGGTG GTTCTTCTGA AGCAGAGGAT GAGTTGGATG
AGCGAAGGGA AAGCCAGAGT CAAACTCAGA ATCAGGGAGT AAGTTATTCC ATTTACGTAT
GAAGTCTGAT CCTAATCACA TCAACTAGTC AATAAGACGG TCTTATGTTC CTGAAACGCA
GTACGACGAA GAACCGTCAA CCGGGAGCGC AGGACCTTCA AAACGTATTC GAAGAGGATG
AGCCAAAGAC TCAAAAATCT GTTTTACCTA CGATTTCCTA TATTTGTTCA CGACATCACC
TTATTGGGTT ACACATGCAA ATGCTTT
 
Protein sequence
MSRDAITNAA GTVESTLLHQ VFIQSLLSRR VVSEAIALEL YKRAVTAVRA YDRQFNPPYA 
ISGHGVASFV TDVSTLLHSV SLEVIRTIDQ RSDRAFFVLR NLDASEVASF ATDLNSMEVE
YLRNLIESIV VSYPANSLAI GQARDVINDS PLTQHKMTKS HAESLLDALV SRGWLYKSKR
TRFSLGVRAL AELETYLKNE FDQYVKSCAQ CRRVVTEGLA CSNVGCDCHI HNTCYARNIQ
QLANPVCPSC SSSFRDLAPK PVGEKAVSIM EDNFKGGRKR KGKGKNVGDM DDEGEEEEGG
SSEAEDELDE RRESQSQTQN QGSIRRSYVP ETQYDEEPST GSAGPSKRIR RG