| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH00220 |
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| Symbol | |
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| ID | 3259328 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | + |
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| Start bp | 1121881 |
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| End bp | 1125425 |
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| Gene Length | 3545 bp |
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| Protein Length | 833 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638258463 |
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| Product | ubiquitin-protein ligase, putative |
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| Protein accession | XP_572216 |
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| Protein GI | 58270120 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5021] Ubiquitin-protein ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.311807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GATCTCGCCT TTCTTTTCGT CCAACGCCCA CTCTAGACCC GTCTGTACTA ATACTGCCCA
TAAAATTTCC TCAATCTTCA CACCATGGTC GCCTTCACGG CCACTGGAAA CAGAAACTTG
TATGTCATCG CCTTTGCCAC ACCGTGTATA AGAGCAACTT GCTTACTGTC CGATGCTCTT
TTTCTCATCC TCCAACCACC GATCAACATA TATAACTCAG AACACGAAAG ATCCGAGTGA
CGAGTAAGTT CTGCTGTCCA TTACGCCGCC TCACACGCTT ACTTGACATC CTTTATACCT
GCCTCCACCC AACAATTGTC ACTTTCCCAT CCTATGACTC ATTCTCTTGC TCCACCCTTT
CACTACACAA CAGTCGTCGC GGCAGATTCC CTCATTAAGC GTGATATCCT CCGACTCCCA
GACCCATTCG CTATCGTCTC TGTTGACTCG GAGCAAATTC ACACCACTTC GGTCATCAAG
AGGACACTGA ACCCTTATTG GAATGAGTAG GTCGTGAGAC TTTGAGATTG GGGTTGGTTC
TGACTGTTTC TGTAGGAATT TTGACATCGA CGTAAAGGAT TCGTCCATTG TGGCAGTACA
AATCTTTGAC CAGCGGAAGT TCAAGAGAAA GGTTGGTGTC GGCGCAGTTG TTCTACCCTA
AATCACTGAC CCCACTCGTA GCAAGACCAA GGTTTCCTTG GTGTGATCAA TATCAAAGTT
TCCGATGTCA TTGATCTTGA ACTTGGCGGT CAGGAGATGC TCACAAAGGA GCTCAAAAAG
GGTTCCGACG GCCAGGCGGT CCAAGGCAAA TTGATCGTTT ACCTCTCTAC TCAAACCAAC
GCTCCTATCT CGAACAACCC CGCCGCTTCT AGCTCCACCA ACGTCGCTAC ACCTGCGCCT
GCTGCTTCTG CTTTGGCTTC GAACAACGCC GCTGGCCAAT CTATCTCTCG TCCCGCCTCT
GCAATTCAGC CCGCCCAAGG CGCCGAAGCA TCCGTTCCTA CTTCTGCCGA CGCCATTGCT
TCTGCTGTTC CCCAACCCGC AGCCCAAGCA GTGGGTGTGT CTTCTTCCGG TGCTCCCAAC
GTCAACCCCA CCATCCAAGC TGCTTCTACT GGTCAAACGG GAACTAGCAC CAACGTAGGC
CATGAATTCG ATTCTCATTC TGACCAGTAC GGACCATTGC CTGTTGGTTG GGAACGTCGT
ATTGACCATC TTGGCCGTCA ATACTATGTC GATCACAACA CCCGTACCAC GACATGGAAC
CGCCCGAGCG ATAATGAGTT GTCTAACAGC GCCACTCAAG CGACATCCAC TGGTGAAGCC
AGAGCGAGGC ACAACCAGAG GACATTGCCT GATGAAATGC TGGACGTGCA GCAGAGCGGT
GCGAACAGTG GTGGCGCTAC CACCCCTACC ACTGGAAGTG CCCAGGCGAA CCCCGTAAAC
GCTAGCAACG CTACCACTGC CGGACAAGGT CCTTTGCCTT CTGGTTGGGA ACAGCGATTC
ACTCCCGAAG GTCGTCCTTA CTTCGTCGAT CACAACACCC GTACGACGAC ATGGGTTGAC
CCTCGTCGTC AGCAACTCTT GCGTTTCATC GCCCCCGGCC AGCAGGGCAA CTTGTCTGTC
CAGCCTCAAA CCGTCAGCCA GCTCGGTCCC TTGCCTAGTG GTTGGGAGAT GAGGTTGACA
TCCACCGCGA GAGTATACTT TGTTGACCAC AATACCAAAA CGACTACATG GGACGACCCT
AGATTGCCTT CTTCGCTCGA CCAGAATGTA CCGCAGTACA AACGAGACTT CAGAAGGAAG
CTCATCTACT TTAGGTCCCA GCCTGCGTTG AGGAGTAACA CCGGGCAGTG TCACATGAAG
GTGTCGCGTG ATAATATCTT TGAGGGAAGC TATACCGAGA TCATGAGGCA GACCCCGAAC
GATTTGAAGA AGAGGTTGAT GATCAAATTT GAGGGTGAAG ATGGTTTGGA TTACGGAGGT
CTTTCGAGGT GAGTCGCATC TTCATTTACT TGTACGTTGC TAAATCCTCT CTCAGAGAAT
TCTTCTTCCT TCTTTCGCAC GAAATGTTCA ACCCCTTCTA CTGTCTGTTT GAGTACTCCG
CTCACGACAA CTATACCCTC CAAATCAACC CCAACTCTGG CGTGAACCCA GAGCATCTCA
ATTACTTCAA GTTCATTGGC CGTGTCGTCG GTCTCGGTAT CTTCCACCGT CGTTTCCTCG
ATGCGTACTT TATTGTCTCA TTCTACAAGA TGATCTTGGG TAAGAAGATT GCACTCCAAG
ATTTGGAGAG TGTGGACGCG GGTTTGTTTA GGGGTTTGAC GTGGATGTTG GAGAATGATA
TCACGGGTGT CATTGAGGAT ACTTTCTCGA TTACTGAGGA GCATTTTGGG GAGGTTGTCA
CCGTTGATTT GAAGCCTGGA GGTAGGGATG TTGAGGTGAC AGAGGATAAC AAGAAAGACT
ACGTCGAGTA TGTCTCGTCT ATTCTCTGAT CAATGGGTTT GGTTGCTGAC ACTTCCCATC
AAAGCCTTGT GACTGAATAT CGAATCTCTA AACGAGTATC CGAGCAATTC CAAGCCTTCA
TGTCCGGTTT CAACGAACTC ATCCCGCAAG AACTCATCAA CGTATTCGAT GAGCGCGAGC
TCGAACTCCT TATCGGTGGT ATGTCCGAGA TCGACGTGGA CGACTGGCAG AAACACACGG
ATTACAGAGG ATACAACCCC TCGGATGAAG TGGTCGAGTG GTTCTGGAAG ATTGTTAAGA
ACTGGCCTGC AGAGAAGAAG TCAAGGTTAT TGCAGTTCAC GACTGGAACC TCGAGGATCC
CTGTGAATGG TTTCAAGGAT CTGCAAGGGT CCGATGGACC GAGAAGGTTT ACGATTGAGA
AGGCGGGAGA AGTGACGCAG TTGCCGAAAT CGCACACTTG TTTCAATAGA ATTGATTTAC
CGGCTTACAA GTCTTATGAG GCTTTAGAGC AAAAATTGAC TATTGCGTAA GTTACCATCC
CACGTTCTTC TAATAATCAA TAATTAGATA TCAGGACGCT GATGACATCA ATTTAGTGTT
GAAGAAACTG TCGGTTTCGG CCAAGAATAA ACCCATCACC TTATCTTCAC GTCTACCTCT
ACTTTCCATC CACCACTTTG TTTTTAGCAG TTGTTTAAAT TCATTCTTTA TTCATCTTCA
TTTGTGTCCA TACCATTTTA ATATATAGAC GAAACATCTG TAATAATTTT TCACTAGCCG
CCCCACTTTT CTTTTATCGC CTTCGTGTCG CATTCGTTTA TGCGTTTTTG TTTCTGTGTG
TAGTTGAGAT CGTACCACTG CAGCGAAGTG ATTTGGATAA AGATACACGT TTCGGCCTCT
TATCGTTTTA TCTCTTCAAT CCCCTCTCTT TTTGTTGAAG TACATTTAGT CGCAACATCG
CACAAAGACC CGATCAGACT AGTTTGTTTG TGTAGTTTAT ATCTCTCGCT CTTTCCCTCA
CCTAGTTCGT ATGTTTGAAA CAAGACAAAG TACTTCTGAG GGAAACGGAT AGGAAAAGAA
TTAGG
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| Protein sequence | MVAFTATGNR NLTRKIRVTI VAADSLIKRD ILRLPDPFAI VSVDSEQIHT TSVIKRTLNP
YWNENFDIDV KDSSIVAVQI FDQRKFKRKQ DQGFLGVINI KVSDVIDLEL GGQEMLTKEL
KKGSDGQAVQ GKLIVYLSTQ TNAPISNNPA ASSSTNVATP APAASALASN NAAGQSISRP
ASAIQPAQGA EASVPTSADA IASAVPQPAA QAVGVSSSGA PNVNPTIQAA STGQTGTSTN
VGHEFDSHSD QYGPLPVGWE RRIDHLGRQY YVDHNTRTTT WNRPSDNELS NSATQATSTG
EARARHNQRT LPDEMLDVQQ SGANSGGATT PTTGSAQANP VNASNATTAG QGPLPSGWEQ
RFTPEGRPYF VDHNTRTTTW VDPRRQQLLR FIAPGQQGNL SVQPQTVSQL GPLPSGWEMR
LTSTARVYFV DHNTKTTTWD DPRLPSSLDQ NVPQYKRDFR RKLIYFRSQP ALRSNTGQCH
MKVSRDNIFE GSYTEIMRQT PNDLKKRLMI KFEGEDGLDY GGLSREFFFL LSHEMFNPFY
CLFEYSAHDN YTLQINPNSG VNPEHLNYFK FIGRVVGLGI FHRRFLDAYF IVSFYKMILG
KKIALQDLES VDAGLFRGLT WMLENDITGV IEDTFSITEE HFGEVVTVDL KPGGRDVEVT
EDNKKDYVDL VTEYRISKRV SEQFQAFMSG FNELIPQELI NVFDERELEL LIGGMSEIDV
DDWQKHTDYR GYNPSDEVVE WFWKIVKNWP AEKKSRLLQF TTGTSRIPVN GFKDLQGSDG
PRRFTIEKAG EVTQLPKSHT CFNRIDLPAY KSYEALEQKL TIAVEETVGF GQE
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