Gene CNH00190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00190 
Symbol 
ID3259299 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp1128436 
End bp1131173 
Gene Length2738 bp 
Protein Length407 aa 
Translation table 
GC content48% 
IMG OID638258466 
Producthypothetical protein 
Protein accessionXP_572214 
Protein GI58270116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.075302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCTTA TCCCCGCTGA GGGCGGCTTG ATGAACGTCG AAGCACTTGA ACCTCGTGCC 
AGCCCCGACT CCCTGTACGT CCCCTTCCCG CATTGCACCT CATCATATGC TTGCAACTTA
CCTTGCCCTT TTTATCGCAG TAACCAGCTC TCCACTGCGA CAGCCCGTCT CAAATCCAAG
TTGGAGCAAG CAATCTTTTT CGGCCAACGG AGTGATAACC CCCTTTCTTT TGAGTTAGAA
GAAGATGTGA GGGGTCAGGG AGATGTAGCC GAGGCCGCGG AGTTGGTTAG TGGGGAGGTT
GTCGCCGCTC GTAAGTCCTG CACTCTCCTT CGCTCGTCTC CGTTAACTTA CTTGGTAAAG
CTCCATTACT TACACTACTC TCGTAGGCTC TCCATACACT CCAACGATCT ATGAATTAAG
GCCCCATCTC CTTGACCGGC TTGATCGATT GAAAGCCCTC GTGAAGTACA TCCGAACCAA
CGGACTGATG AACCAGTTAC CGCAAGCGAC GAGGAGGAGG CTGTCGGGAG ATGGGGAGAA
GGTTAGGGGG GCATTGGAAC TTTGGGATTA CCAGAACCGT TTGATGGAGT GCGTCCTCTT
TTCTTTATCG TTTTGGGATT TGGACAAGAA TTGACGATGT CGCACCAGCC AATCATCGGG
CCCAGGCCCT AGTCAAGCCA AATCCCTTTT ATCAATTTCG ATCCAAGTAT ACTTCTCCTC
CCGTCATCGT TTCCTCGCCC CGTCATCATC TCCCACCGAC GAAAGAGAAC AAGATCTTGT
CAGGTTATTT TTCCGGACGG AAGTGTCGAA TCTTGACAAG TTATTGACTG TCGTCTTTGG
GGAGTTCAGG GATAAGCAAA AGGGGGAAGT TGACGTGAGT GAAAGGGCGG GTTGGGTCGG
GGAGGTTAAC CAAATCTTTA TTGTGAGTCC TATCCTCATC ACATATTAAT GAACGATCAA
GACAAGCTCA CGTCCTATTG CGAGAAGGCT GTTGAAAGGG CCGCAGCCCA GTATCGCGAA
GAAGAATCTG ATCTTTACGC CATTGACCGT GAAAAGCCTG CGATTGAAAT GTGGACAGCG
TCGGACAGCT TGATTGATTC GTTGGACCAT CTGTATACGT TGACGGAGGC GTTGATTAAG
GAGCGTACTA GGGAGTTGGG ATCGGTTATT GATGAGGCAC ACGTTGCTGG TGGTCCAACT
TCGAGGATAG AGGCAGGAAG GGAAGAACTA AGAAAGGAGC AAGTAGTACA GGCAACGTTG
AAGAGACAGA TGGGATGGCT GGCAGCTGCG CTGTGTACGA ATATGGAGGA CAAGTGTCGT
GTTGTGGTCA GGTACGTTTC TTCTGTGCTT AACTAGTATA GCGATTTTGC CTTCTCTCTA
CAAGGCCTCA TGTTCGAGAA AAAGCTAATA GGGGTTACAG GAGACAGATG GATGATGGAG
CAGATGAGCA GGAAGGGATT ATGCTCAAGG CTAAATGGGA TGCGATGAAA CCCCGGGTTA
TCCGGCCTCT CGGTACGCCC ACATCTTCAC CCAACATCAC TCCGAAAATA GATCAATATG
ATTAATCTTT TTGCCTCGAT TATTTAGTCT CCGTTGACCG CATTTCCGAA GCATATGAAC
TCGCAGAACA TCATCACGAC TTCCCAACTC TTGTAATGCT GTGCAATGAT CCCGTTGCGG
GCCAGGGAAA AGGGGACAGT AGAATACAAG TGTATATCGA GAAGTTTGGC GAGGATTTCG
CGTTCGAGCT GTATAGGTGG TATATTGACC AAGGTAAGTG ACTGGGTGAG GCTCGAAGCT
TTACGCTTTT GCTAATCCTG TTCATTTTGT TGCCATCGAA AGGCCAACTG CACGCTCTTT
TGACACAAGA CGAAGTTTAC GGATCTCTCG TTACCCGATT CTTTGAGACA CACCATTACC
CTGAACTCGG ATGGATACAC CACATTGCGT GTAAACGGTA CGGTGAAGCT GCTGGAGCTT
TAACGCAAGT ATTAGATGAG GGTGAGGGGA AGGAGGAGAG TGGCGAGCTA GACTTTAGAA
AAGTGAGTCC ACCTTGTTCT TCGGCTTTGA TTTGAGCCCT GTTGAGCGAG AGGAAGAGAG
AGATAGCTGA CTGATGGGAT GTTAGGTGGT AGGCAGTATC GCAAAGCTTG CTAGTATGAC
CGACATCAGC TTGAGGGGCC CATCCGAAGC TCGCGATCAG ATTTTCCAAA GTAAGTGAAC
GTCTCGACGC ATTCGTATTA AGTAAAGATG GCTGAATTTC AATGCGCAAT CAGAGATCGG
CCAGCAGTTA TCCTTGATCG ATATTCAAAG TTCCCTCCGC ACTTATTTAC TCTCCCTTTT
CCCATCTACT GCCCGTTCAT CGCGTTCAAT CGCCAAACAC TTTGCACCCA TCCTCACCCG
CCTTAGCCAT CGACCAGGAT CCGAATCTGG ATCTGCTTTC CTTGCATTGT TTTACAATCT
TGCAGAGAGA GTCATTGGCG GAGAAGCTGT AGATTTGGAA GGCATGCTGG ATTTATTGAC
ATTGAAGGAT AATGTAGGGA GGGAAGATGA TGGAGTTGAC GCGCTGAGAG TTTTGGTACT
TGATCGGGTA AGTTTTCATT TTTGAAGCTC TTTGAAAAAC AATACCATGG ATTGGAATGA
AACGCTGAGC ATATTTTGGT TTTCAGTCAT TACCTAAAGC CAGGTCGGAA GTTGCCTTAT
TGGCAGTATG GCGAAGGATT TATATTCGCG ACGAGTAA
 
Protein sequence
MVLIPAEGGL MNVEALEPRA SPDSLYVPFP HCTSSYACNL PCPFYRSNQL STATARLKSK 
LEQAIFFGQR SDNPLSFELE EDVRGQGDVA EAAELVSGEV VAAPLVKYIR TNGLMNQLPQ
ATRRRLSGDG EKVRGALELW DYQNRLMEPH VREKANRGYR RQMDDGADEQ EGIMLKAKWD
AMKPRVIRPL VSVDRISEAY ELAEHHHDFP TLVMLCNDPV AGQGKGDSRI QVYIEKFGED
FAFELYRWYI DQDEVYGSLV TRFFETHHYP ELGWIHHIAC KRYGEAAGAL TQVLDEGEGK
EESGELDFRK LEGPIRSSRS DFPNHRPGSE SGSAFLALFY NLAERVIGGE AVDLEGMLDL
LTLKDNVGRE DDGVDALRVL VLDRSLPKAR SEVALLAVWR RIYIRDE