Gene CNH00140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00140 
Symbol 
ID3259243 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp1146000 
End bp1147904 
Gene Length1905 bp 
Protein Length193 aa 
Translation table 
GC content46% 
IMG OID638258471 
ProductRho small monomeric GTPase, putative 
Protein accessionXP_572208 
Protein GI58270104 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTCTTTTC CCCTCCAACG CTCCCAGAGG ACACAGCCAC AACCCTCCTA GCCAACCATG 
CAGACAATCA AGTGTGTCGT AGTCGGAGAC GGTGCCGTTG GAAAGTAAGT CCTCGTCATT
CCGCATGAGC CTCTCGCCGG TACACTGCAA CTCACACGAT CCATAGGACC TGCTTGCTCA
TCTCGTACAC TACCAATAAG TTCCCATCCG AGTATGTTCC TACCGTCTTT GACAACTGTA
TGTCTTTCTC TTTCGACGTA TTAGTAATCG TCCGCTGACT TGTATGTGCC TGAAGACGCC
GTCAGTGTAA CTATCGGTGA CGACCCATAC ACTCTTGGTC TCTTTGATAC TGCCGGTCAA
GAAGATTATG ACCGTCTCCG TCCTCTCTCA TACCCCCAAA CTGATGTCTT CCTCGTTTGC
TTCTCTGTAA CATCTCCCGC GTCTTTCGAA AACGTCCGCG AAAAATGGTT CCCCGAAATC
GCCCACCATT GCCCCGGCGT TCCCGCACTT ATTGTCGGTA CCCAGGTGGA TTTGAGGGAC
GACCCTGCTC AGACGGAGAA GTTGGGAAGG CAGAGGATGA AGCCGATTAC ACAGGACATG
GGAGAAAGGT TGGCGAGAGA GTTGGGAGCC GTGAAGTATG TGGAATGTTC GGCGTTGACT
CAGAGAGGAT TGAAGAACGT TTTTGACGAG GTGAGTTTTG AATTGGGCTG AAGGAAGGCC
CGCTGGTTGT AAGCGGAGAG GAACCAGAGA GTGATGCCAA TGGAAAGGGA GTTATATCTC
CCGGTGCCCA TCTAGAAGGT GCTCCATTCC GCGCATCAGC TTCGTTTGCT TCTTTGAATT
TCGGCTGCCC ATAACACACA TGGAAAAGGA TCAGCGGCTG ATGTTTTTAT CTCGTAGGCC
ATCGTGGCGG CATTAGAACC CCCTATGGCG ACCAAGAAAA AGTCTAAAAA GTGTCTCATT
CTTTAAAGAC ACCCCTTCTT TTTGGCTTCC CTTTCGCCAT TATCTCTATC TCATTCTTCG
TCTATCATTC GCTTTTCATT TCTGCCATCA CTTCCTTCTT GATCCAAGAT ACCCAACATT
CCTCATCCCT TGTCAAATAT CAGCTTGCAA TATTTTTCAG AATTTGAAGT TTACTTTGCC
TCGCCCCTCG CTGTTCTCAA ATTCATGTCA CATTATCGTG TTCTAAACTT CCCCTACTCG
ATAAACTCAA ACATCCGAAA CTGATTTCCA CTCTGTATCC CATCCCATAT TTCGACTTAA
TCTATCGCTT ATTCAAATTA CTCCATCTCT TTCACTCTGC CTTTCGAGCA TATTCACTCC
CTAACCCTCG ATGAACCGAT CAATACAACA TTCCTCCATT TTTTCAGACT CTACCACCAC
GTAAACCACC GAATCAAACC GATGAGAAAT CAACGAATCA ACCAAAATTA ACTGTGGAAC
ATGAGGGATT GTCAGTGGAA TGGAAACTGT TGGCAATGAC ATAGAATGGG GTTTGTGTTC
GAAACGGGTA GAACTTGCCG AGGTTGAAGC TTGGCGGGTC TGGAGAAAGT TGAAAATGAT
TTCGGATTGT CTGAGAATAA GAGAGAAATT GGGTTGGTCG ACTGATGTGC AGCGAAATGA
AATGGGGATG AGGGGGGAGG GATGGAGATG GTGTTTTCTT TGATTATTGA GAGAGGGAGG
TAGGAGAGGA AGTGGACATG AGAGAAGGAA GACGGGGCGA AGAGTTGCAA GGGGCCGTTA
TACCTATCTT ACACAGATTC TCCCTTTCCG TCTTTACTTT TTTCCTCCTA GTTTATCTGC
TTTTATTCCT CTTCCATTCA TATACGTATA CCCCGAGATT TATATACAGA TCTTTATATA
AACCCCCTGT GAATTGATGC TTGATGTTTT GGTTTTTTTC ACTGC
 
Protein sequence
MQTIKCVVVG DGAVGKTCLL ISYTTNKFPS EYVPTVFDNY AVSVTIGDDP YTLGLFDTAG 
QEDYDRLRPL SYPQTDVFLV CFSVTSPASF ENVREKWFPE IAHHCPGVPA LIVGTQVDLR
DDPAQTEKLG RQRMKPITQD MGERLARELG AVKYVECSAL TQRGLKNVFD EAIVAALEPP
MATKKKSKKC LIL