Gene CNH00130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00130 
Symbol 
ID3259213 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp1148351 
End bp1150006 
Gene Length1656 bp 
Protein Length336 aa 
Translation table 
GC content48% 
IMG OID638258472 
Producthypothetical protein 
Protein accessionXP_572207 
Protein GI58270102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.195105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGTCAAGTC GTCATAGGAC AACTCTCAGA ATATGACCTA CCTAACCGCG CACCTCCCAT 
TCCCATCCGG TTCCTCCCTC CCTCCCCCTG CATCCCACTT GGTCATCTCA GATACTCTCA
ACTCTCCCGC CCAATTTGCG CTTTATCACC TGGTCAATGC TGCTCTTCTC AAGCAAAAAT
CTCAACCTCC GTCTCTAACT CAGGCGAGAC AGATCAATGG TCGTGGAACA GAATATGTGA
CTAAAGTTGT GTGGGTTGAC TTTAGAAGTG AAGGAAGGTC AAGCTGGGAA GTCATCCTCA
AGAAACTCGT ACGTCCCTTC CCCTCCTCTT CTATCAACCT CACCGAAAAC TAACGAGCTC
GTCATTTTAA AACGTACAGG GCACCCCACT CCCATCACCC ACCTCTCCTG CATTCATTCA
CATTACTCCT TCTTCCTTAC CCGCCTGCAT TTCGTCTTCT TCCACTAACG CCAACTCGCC
GAGAATATTC CCTTCGCTCT CCCTCGGAAC CGGAGACGCA ACCTCGGACA GAGATGGGCG
CCCAACTCTA AAACACGTAT ACGATACTCT CCTCCCACAC CTTCAAACGC AAGCACAACT
ACGATCACAA CCTCCATCAA ACCCCGAACA AGGGGAAGGA GGATCAGAAT TAGAATGTCT
ACTCATCCTA GACGGCTTGA GCGACCTCTT GTCCATAGGT GTCCCACTTC GAGAAATTCA
TCGATTCGTC AGAGCTGTGT ACGCTCAGAT CAGGATCGTA AGTTCCGGTT CCGCATGTTG
TCATCTTTCC CTAGAGCTAA CTAAACCCCA ACTTTTCTCC TTGCTACAGT CCAAGGCAGC
CCTCGTATCA ACCCTCCACA CCGATTCTCT CTCATTTTTA ACTCAACCAT CCCTATCTCT
TCCCCTATCC GAATCAGAGA CAGAGACCAA CCTGCTCGAG CGCCTATTAA AAATCGGACA
CGGTGTTTGG TGGAGAGTTG AAAATCTCCA ATCAGGGAGG AGTGGAGATG TCATGGGCGA
AGTAAGTCCC CCACTTTCCC AGATCGCAAA AGTCTCAAAT TCCTCGAGTC TTCCAGTTCT
CATTCTCATC TGTTCTGACT TTCCTTCTTT CTTTCTCCCC ACGTAGATCT CTTCCCACCC
ATTCGGCACC CATCACTCCC ACCCTAACTC CAACTTCCGC GCCGAAACAG AAAAAGACAC
GTATATACCC CGTTCAAAAC CGTTACAATA CCGTCTTGAA CCTTCCACTG TCCGGGTATT
TGCTAAAGGT ACCGGAAGAG GGTTCCTCTA AATCACTTGC CTTTTTTAAT CTATCCCACC
CTCTCATCCT TTCTATCCTC CTACTCTTTT ACATTTTCAA CTTTATTAAG CCTTCCATGG
TTTGTTCTGC CAATCCCCCT TCTTTTGATA TTTACCCTGG AAAGCTGGCG TTTAGGTGCC
CTGAAGAGAT AGGAAATAAA GAGACAAAGG AGAGTGTGGA AACGAGAGAG GAATCAAGAA
GGGAGTGTTA GAAACAGCCA CAGTTATCAT ATATAAAGAA ACGCAATTAA GTCGAGATTG
AGGCAACGGC AGGAGGGTGA CACTCGTTTG TCGTGCCATC TGGGACAGAA AAGGATGGAA
TGGTATCCGG GAAAGACGAG GAAATTTAGA TACCTC
 
Protein sequence
MTYLTAHLPF PSGSSLPPPA SHLVISDTLN SPAQFALYHL VNAALLKQKS QPPSLTQARQ 
INGRGTEYVT KVVWVDFRSE GRSSWEVILK KLGTPLPSPT SPAFIHITPS SLPACISSSS
TNANSPRIFP SLSLGTGDAT SDRDGRPTLK HVYDTLLPHL QTQAQLRSQP PSNPEQGEGG
SELECLLILD GLSDLLSIGV PLREIHRFVR AVYAQIRISK AALVSTLHTD SLSFLTQPSL
SLPLSESETE TNLLERLLKI GHGVWWRVEN LQSGRSGDVM GEISSHPFGT HHSHPNSNFR
AETEKDTYIP RSKPLQYRLE PSTVRVFAKG TGRGFL