Gene CNH00110 details

Gene Information

• Locus tag: CNH00110
• ID: 3259310
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: -
• Start bp: 1151780
• End bp: 1153983
• Gene Length: 2204 bp
• Protein Length: 537 aa
• GC content: 49%
• IMG OID: 638258474
• Product: hypothetical protein
• Protein accession: XP_572205
• Protein GI: 58270098
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCGAGTTAT CTACCGCTAA GTCTATTAAG CCCTCAAAAC TATCCACCCT TTAGATCACC 
AACAAACGCC ACCATGTCCG CCTTGATGGA CGAAAAATAC AGTATCGAGC ATACCGAAAA 
TGGGGAGGTC TTAAACAAAG ATGATGGCCA CCACCATCTG ACCCAGCAGG AGATGAAGCA 
TGGTGACAAT GCCCTCAAGT ACATTGGAGA AGAGCGAATT GAGGTTACGG TTGAAGATGT 
GAGTTACTGT TTGTCTCCAG CAATTGTTTT CAGGCGACTG ACACCTCTTG TAGGATAAAC 
GAATCAGGAA ATTGACAGAC AAGTACATCC TGTCACTACT CACATGGGTC TACTTTTTGC 
AGATCCTTGA CAAGACTGTA TGTCAGCGTT ACATACAATC AATGAATTAC TCTAACCAAA 
ACGTAGATCC TCGGTTATGC CAACACATTC GGAATGTCCA CTGATACCCA CCTTGTCAAC 
AACCAATACT CTCTCCTGGG CTCCGTCAAC GCCATTGTAC AACTAGCTTG GCAACCGTTT 
TCCTCTTATC TTATCGTTAA GGTCCCCGCT CGTTACCTCA TGCCTGCAAT GGTCTTTGGC 
TGGGGCGCTG CTCAAGCTTG CATGGCCGCC GCTCACAAGT AAGTCTTTCC CATCCCTTTC 
CACTGTGGTG ACATACCACT CCTTTGGCCA CGTGCTGATA AAGCCTTTTG TAGCTTTGGA 
GGTTTAATGG TTTCTCGAGC CCTCCTTGGT CTCTTCGAAG CTGGTTGCCT TCCTCTCTTC 
TCTCTTCTCA CTTCCCAATG GTACCGTCGA TCGGAACAGC CCGTTCGTGT CGCCGTATGG 
TACTCCACCA ACGGTCTCGC CACCGTTGTC GCCGCTCTCC TCTCTTTTGG TCTTAGTCAC 
GTCTCCTCCC CCCACATCAA GGTCTGGCAG CTCATCTTCA TCATCTGCGG TGGTATTACT 
TGCCTGACCG CTCCTGTCAT CTACTTCTTC ATTGACGCCG ACGTTCCCTC TGCCCGATTC 
CTTTCTGAAG AAGACAAGGC GAAAGGTATT GAGCGACTGA GGGCTAACCA GACCGGTACC 
GGTACCAACG AATTTAAACT CTCCCACGTA TGGGAACTCT TTTACGACGT CAAGTCTTAC 
CTCTTCTTGG CCCTCGCATT GCTCTTGAAT GTGGGCGCAT CAGTTACTAC AATCTTTGGT 
CCGACTCTCA TCAAGGGCTT TGGATTCAAC AGCCGAATCA CCTCACTGCT CAACATGCCA 
TTCGGTTTCC TGCAGTTCCT CGCTATTCTT GCAGGCTGTT TCGCCGCTTA CAAATTCAAG 
ATCAAGTCTG CCGTTCTCGC CTCATTTGTC ATCCCCGTCA TCGTCGGTCT TGTCTTGCTT 
TACGTCGAGA ATTCTGCTGC TGTGCTCAAG CAAGCTCCTG CTCTTGTCGG TTACTACCTC 
CTCGCCTTCC TCTATGGCGC CAACCCCATC ATCGTGTCAT GGATCGTCGC CAACACTGGT 
GGACAGACCA AGAAAGCGTT GCTCATGAGT GTCTACAACG CCGGTTCTGC TGCTGGTAAC 
ATCATCGGCC CTTTGTAAGT CCCTCTTCCG CCTACTCTTA TCCCAACTTC GCTGACCCGT 
CCTTCTTCAC GTAGGCTCTT CCAAGACAAA GACAAGCCCC ACTACCTTCC CGGTATCAAA 
GCCACCCTCG GTATCTTCTG CGCTCTCATC GCCTGTATTG GCTTCACAGC CGCCTTCCTC 
TTCTTCCTTA ACAAGCAGAG ACAGCGACAG CGTGTGGCCG TGGGCAAGCC TCAGTTTATC 
AAGGATACTT CGATGAGCAC CAAGTATGAG GCTTATGGTG GTGATGATGT CGAAGGCAGA 
CTCGGTCAGA ATGGTGAGTT TTCCCTCTTT CTCCCTCCCT TGAACAGATT GTTGACGAGT 
CATATCTTAG CTTTACTCGA TTTGACCGAC TTCAAGAACG ACGAGTTTGT TTATGTCTAC 
TAGTGCATCA AAACGCCCGG ACCCAGTTTT CGTCTTTGTC TCCTGCTTGT TGTTTTTTTT 
TTTTTCTCAC TTCGCATTTC GACCCTTTTC GGGCCTCGAT TCATAGGATT GCTAGTCCAA 
AAGGACAGTT GTATTACTTC ATATTAGGGA CTTAGTTGAC AAATAAAGTT GGAAATTATA 
TCTCACATAC CATCTATGTA AATAGTCATC AATCAATGCA ACTA 

 

Protein sequence

MSALMDEKYS IEHTENGEVL NKDDGHHHLT QQEMKHGDNA LKYIGEERIE VTVEDDKRIR 
KLTDKYILSL LTWVYFLQIL DKTILGYANT FGMSTDTHLV NNQYSLLGSV NAIVQLAWQP 
FSSYLIVKVP ARYLMPAMVF GWGAAQACMA AAHNFGGLMV SRALLGLFEA GCLPLFSLLT 
SQWYRRSEQP VRVAVWYSTN GLATVVAALL SFGLSHVSSP HIKVWQLIFI ICGGITCLTA 
PVIYFFIDAD VPSARFLSEE DKAKGIERLR ANQTGTGTNE FKLSHVWELF YDVKSYLFLA 
LALLLNVGAS VTTIFGPTLI KGFGFNSRIT SLLNMPFGFL QFLAILAGCF AAYKFKIKSA 
VLASFVIPVI VGLVLLYVEN SAAVLKQAPA LVGYYLLAFL YGANPIIVSW IVANTGGQTK 
KALLMSVYNA GSAAGNIIGP LLFQDKDKPH YLPGIKATLG IFCALIACIG FTAAFLFFLN 
KQRQRQRVAV GKPQFIKDTS MSTKYEAYGG DDVEGRLGQN ALLDLTDFKN DEFVYVY