| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH00100 |
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| Symbol | |
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| ID | 3259266 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | + |
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| Start bp | 1157252 |
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| End bp | 1161513 |
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| Gene Length | 4262 bp |
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| Protein Length | 662 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638258475 |
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| Product | endoplasmic reticulum protein, putative |
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| Protein accession | XP_572204 |
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| Protein GI | 58270096 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0390178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTTACCCCAT CATCGGAACC CAACACCGCA AACCCGCGGA AAACAGGCAA CTTACGTCGA
CTGAATCGAC ACAAATCGAC CACAGCAAGA CCTTTCGGCA TAGTCACCGG TCCACGTACT
ACGATCCCCG TATATATAGA TATCTTTCTC TTGGCGACGT ATAATATTCA GCAAATCTCG
TTCCAGAATG GCGCTAGAAC ATCATCAAGA TGCACAAGAA CCACAAGACC AAAGTCCATG
GCGCCGGCGC ATGTCCCACC CTCTTCCTAT CCCCACTTTC CGCCCCAACA TCCCCAACAT
TCCTCACCTC CGCGCTGCAC TTCTCGGATA TCTTGGTGAA CTTGAGACTG CTCTCCGCCG
TAAACTAGGA GACGATCTTT CCGAAGTTGG AGGGGTCTTA CATGGTGGTG GCAACGGTAG
CGGAAGGGGG AGGTTGCCAT CGGTCTCATT GTCATCTTCT ATGTCAACGG AGGACTGGAC
TACGTCGACT GAGAGTAATG ATGAAGATTC TTACCATGGG TATTCGTCCG CCCTTGCTGG
ATCTTCTTCG ATTTCCGAGG TTCGACAGCG TAACATTGCC ACTAACGCCG ATAGCAATGG
TAGCCCCAGT GCCAATACCA ACGCCAAGGA CGATACCACT ACAGATCCCT CATCTACAAA
AGACAGCTAC ATCAACCTCC TCAACCACCT TTCCGCTCTT CGCGAAGAAG CTTCCAATTA
CCTTCCTTCC TTATCTGTGC ACATGCCTCT CTCTATACCT AACCGGCAAT GGCTTCGCTC
CCTCCCTTCA CGACTCTCCA TCGTCGACCC TGGACTGCTT TCTCCTCTCG ATAAGGCGAA
AATCAAGGAC GAGCTTGCAG CCGTGATAGA TTTTGAGAGT GGGGCAGTGG AAGGGGCGAG
GAAGAGGGTG GTGGACATGG TTCATGCGAT GCTGCCTTCA GAGGATTGGG CGGGGTGGGA
GAGGTTGGGA TGGGAGGAGC AAGAGTACGG GGATGGGTGG AGACCAGGGG AATATGGACA
CAGGCGGACG CGATCAGCAT CCCTTGGTCG ATCCGGCAAA GGGAAACACA ATCAAGACAA
TGATAGCGAC TATCCGATGA TGGAAGATGA AGAACCAGAA TACCTTTTCC CCAACCGTAC
CCCCGCCTCA ACCCGCGCAC TCGCAAGAAG AAGAGCGGTC AGGTCGAAAT CAGTAGGGGC
GGCGTCGTTA CCATTAGTAA AGAGGGCAAG GATGGAGAGG TCGCAGAGCT ATGCGTTTGG
GTCGTTGGTC AGTTTTAGTC CGGGAAAGAC TGTTTCAGAG CCAGTTGAGA TGGGAAGTGC
GGGTGGGAGT GATCGTGAGG ATGGGGACGA AGCCAGGGAT GAAGATGGTG ATGAGGTGGA
CGAAGTGATG AACGAAGAGG GGAAGGACGA GGGAGAGTTT ATCAGTATAT CGTACTTGAC
CGTAGACTTA AAATCAAGTC TGATTGCTGT GGAAACGACG ACAGACCCGT CTGTCGCTGA
TGGGCTCAGA AGTTCAGAGG ATGGGGGAAA ACTGATAACG TACAACGAGT TGCCTGCGAT
ATGGAGAAAT AATGAACATA TTCGTACTGG CTAGTGAGTG AATTGTCTTC TCTACTTTCT
TCCTTTTTTC TTCTCCCCCC ATTCTTTTCC CTTTCCGCCC TCCCAAGTAT TAATTTGATA
TCTGTATGAC GCGGAATAAT TTTATGCTAA CGTGCACTGC CCGCCTTGTT AAAATAGCCG
ATTCATACCT CTACACCTCA AGACGGGGCC TGTGCCGCTT ATCAAATCTG CTTTTGCAAT
ACATAACGAA ACCGGTTCGT ACTTCCATTC CTTTTGGCCT TCCCTTTTTC CTTCGCCTTC
GCTCTCTCCG TCTTCCTCGC GGACTTGGCC CGCCCACTAC CTGAAGTCAA AAGGTAATAA
ATATACTGAT GTCTCACTCT CTTTTTGATG GCTGTAGTGA ATATACATTC GCATTTGATT
CCAACGCTTT TCATTTTCGC TTGTATACCC GTAAGCATTT CGGCTTTTCT CCTTGAAATA
AGGCTTCATT CTGCTGAATC TTTGTTTCTT TTTGCCCCGC CTTCGTATCC ATCCCATATA
TTTCTCGCCT ATCTTCTCCC TTTTTCACAA ATCCGCCCGC CTTGCTCCGC TCAAACGTCC
CCTTACTTCC CTTCATCTCC TCCGTCCCCC TCTTATGCTT CAATCAACGC GATTATGCAA
TAAACAATAA CAGTTTATAA TATATAATAC CCCCCTCCCC GACGCCCACC CACTCGACAC
AGCAGTAGTG ATCGCCTACC TTGTCGCTGC TATTTCCTGC CTGAGTTCTT CAGCTGGGTG
GCATGTGTTG AGCGGGTGTG CGAGTCGAAA GTGGTTTGAG TGGGGAGCTT GTGTGGATTG
TAAGTTTTCT TTTCTGTGTT TTGAAGTGTT GTCGGAGAAG AGGTGGATAG GGATGTTATG
AAATAGGAGA AGGGACGAAG GCGGAAAGAA GATACAAGGG GTGGTGATGG GGATAGGGAT
GAGAATGACA GATGACAATT GCTGACGCCG TAACTGTTTC ATCTTTATTT CATGTCGCGG
ATCAATAGAT ATTGGTATAT CATGTACGTC CCCATCTAGT TTTTCCTTCT GTATACCAAA
GAGTAAGCTG ACGAATGATG TCCCTTCATA TCTTTCACTC CCACTCCCAA CATTTCTCCC
TGCCTCTTTT CTTCCCGGCT TTCGAACCAC GATTTGTCCC CTACTGTTCC CTCCGTCGTT
CCACTTCTCC TTAACAATTT TCATCTTTGT CGCTCCCTCG CTTTCTTGCC TCGTCACTCG
CCATTCCTCT CCCTTCCCGC TCCACCATTC TCTCTCGCTT ACAATCAATA TAACAGGGCT
CATAGCAGCA TCCTTCGGCA CCGTCGTTTA CAACGGTTTC TACTGCCAAC CGAAATTGAC
ATTGTTTTAC TGTACGACTA ACATGCTATG CGGAGCCTTG GGGTCATATC TGCCTTTTCA
GCGATGGTTC AATGAGAGGC GGAATAAAGT GAGTTTTTTT TTCGTCCTTC CTTTTCTGAG
ATATTCAAGG GATTTGCTTC GAGAGATTCG ACTTGACCCC AAAGAAAGTA GGAGGGTGGA
AGGAGTTTAG GGATTTTTTG TTTCGTTTTT TTGCGTTGCT GACGCCTGCT TTCGTATTTG
TTTAGCATCT GAGAATATCA TTCTTTCTTT TCCTGTGTTT TGCGATGTTT GCGCCGATGG
TACACATGTT TGGGCAATAT GGATGGCATA AAGCGTCGGC CTTTGTTGGT ACGTTCGCCT
CTCCCCCCTC ACTCTACCTC CTCCCATCTC CCTCTCCCTC CTCACCCTTA CCAATTATCG
TACTTCGTGT CGAATGGATG GCTGACGTTT GGGATGGTCA TTGCTCGATC TGATCTTGCT
CTTTGTGTCT TGGACGACAT TACGTCTTGA AATATTTTGA CATTCGACTT GAAAAATCTT
TTCATCACCC TCTTTCATTA TCCCTTCCTT TTGACTAATA CACCGTCCCC CCATCACCAT
TGTATCGTCA CATCGTCCAT CCATTCCTAT CCAATTTTAC TTCATTACCC ATTATGCTGG
TGTTGCGCGC CACTTTTTGT GGGATCTACA GCCCCATTCA TGGTATCCAT CGTAGCGTAT
GTTGTTGGTC TTTTGTTCTA CGCGTTTCAT TTCCCGGAAT GCAAATGGCC TGGAAAGTTT
GATATATGGG GATCTAGTCA TCAGGTGCGT TACTTTATCT ACAGTAAAAT GAAATTGGTG
ATTGCTGATT TTAACCAAAC TTACTTTTTT CAAACCGTCT ATCTTGTCCT CCCTTTCTTT
GATATCGATA ATGGTGTTCC GCATCCATAC CAAATCCATT ATACAACTTC CCTTCCTGCT
CTCCTCTATT CTCTTCTCAA TAAACAAATA CAGCTCTGGC ATCTGGGTAT CGTCGTCGCC
ATCGTCCTCC ATTATCGAGC TATCTTTGTA GCGCATGGTG TGAAGCATGA GTATTCTTGT
GCGGCGCCAG GTCAGGATAT TTCGGTGGCG ATGGTTTTGG AGAGGATGAT TGGGTGGCGA
TAATGCAGAG ATAGAAGCGG GAGATAAGAG CTGAGAGAGA TGAAATGGTC GGGGCCAGGT
CGGGGAAGGG TCGTGCGAGT GGATTGAATG GCACTGGATG GTCATGCGTT TCGACTGGAT
GAAAGCGATG GCGAAATCAT GAGTGTACTT GGATATCTGG TAAAAATGCA TCTATTATTA
TA
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| Protein sequence | MALEHHQDAQ EPQDQSPWRR RMSHPLPIPT FRPNIPNIPH LRAALLGYLG ELETALRRKL
GDDLSEVGGV LHGGGNGSGR GRLPSVSLSS SMSTEDWTTS TESNDEDSYH GYSSALAGSS
SISEVRQRNI ATNADSNGSP SANTNAKDDT TTDPSSTKDS YINLLNHLSA LREEASNYLP
SLSVHMPLSI PNRQWLRSLP SRLSIVDPGL LSPLDKAKIK DELAAVIDFE SGAVEGARKR
VVDMVHAMLP SEDWAGWERL GWEEQEYGDG WRPGEYGHRR TRSASLGRSG KGKHNQDNDS
DYPMMEDEEP EYLFPNRTPA STRALARRRA VRSKSVGAAS LPLVKRARME RSQSYAFGSL
VSFSPGKTVS EPVEMGSAGG SDREDGDEAR DEDGDEVDEV MNEEGKDEGE FIMNIHSHLI
PTLFIFACIP FIIYNTPLPD AHPLDTAVVI AYLVAAISCL SSSAGWHVLS GCASRKWFEW
GACVDYIGIS WLIAASFGTV VYNGFYCQPK LTLFYCTTNM LCGALGSYLP FQRWFNERRN
KHLRISFFLF LCFAMFAPMV HMFGQYGWHK ASAFVAPFMV SIVAYVVGLL FYAFHFPECK
WPGKFDIWGS SHQLWHLGIV VAIVLHYRAI FVAHGVKHEY SCAAPGQDIS VAMVLERMIG
WR
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